Strain Fitness in Pantoea sp. MT58 around IAI47_13370

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,829,640	+				+0.9
2,829,746	+				-0.2
2,829,747	-				-1.3
2,829,747	-				+0.5
2,829,791	+		IAI47_13365	0.15	+0.9
2,829,918	-		IAI47_13365	0.29	-0.9
2,829,958	+		IAI47_13365	0.34	+0.6
2,829,959	-		IAI47_13365	0.34	-0.5
2,829,959	-		IAI47_13365	0.34	+0.6
2,830,033	+		IAI47_13365	0.43	+0.3
2,830,033	+		IAI47_13365	0.43	-1.2
2,830,036	+		IAI47_13365	0.43	-0.9
2,830,036	+		IAI47_13365	0.43	-0.1
2,830,036	+		IAI47_13365	0.43	-0.1
2,830,036	+		IAI47_13365	0.43	-0.7
2,830,037	-		IAI47_13365	0.43	-0.0
2,830,037	-		IAI47_13365	0.43	-1.4
2,830,037	-		IAI47_13365	0.43	+1.4
2,830,037	-		IAI47_13365	0.43	+1.1
2,830,037	-		IAI47_13365	0.43	-2.0
2,830,075	+		IAI47_13365	0.47	+0.5
2,830,153	+		IAI47_13365	0.56	-0.8
2,830,154	-		IAI47_13365	0.56	+0.9
2,830,154	-		IAI47_13365	0.56	-0.4
2,830,154	-		IAI47_13365	0.56	-1.9
2,830,243	+		IAI47_13365	0.67	+0.2
2,830,243	+		IAI47_13365	0.67	-0.3
2,830,244	-		IAI47_13365	0.67	-0.4
2,830,260	-		IAI47_13365	0.68	-0.3
2,830,292	+		IAI47_13365	0.72	-1.4
2,830,292	+		IAI47_13365	0.72	+1.5
2,830,292	+		IAI47_13365	0.72	-0.0
2,830,292	+		IAI47_13365	0.72	+0.9
2,830,292	+		IAI47_13365	0.72	-0.1
2,830,292	+		IAI47_13365	0.72	-0.0
2,830,292	+		IAI47_13365	0.72	+0.1
2,830,293	-		IAI47_13365	0.72	-0.4
2,830,293	-		IAI47_13365	0.72	-3.5
2,830,293	-		IAI47_13365	0.72	-0.0
2,830,293	-		IAI47_13365	0.72	+1.8
2,830,433	-		IAI47_13365	0.88	-0.0
2,830,433	-		IAI47_13365	0.88	+0.8
2,830,433	-		IAI47_13365	0.88	-1.2
2,830,433	-		IAI47_13365	0.88	+0.0
2,830,529	+				-0.6
2,830,535	+				+1.7
2,830,548	-				+0.7
2,830,554	+				-0.2
2,830,554	+				-0.6
2,830,571	+				-0.5
2,830,571	+				-1.4
2,830,634	-				-1.3
2,830,639	+				-0.0
2,830,639	+				-0.5
2,830,639	+				+0.0
2,830,639	+				-1.3
2,830,640	-				-0.6
2,830,640	-				-1.2
2,830,662	-				-1.0
2,830,662	-				-1.8
2,830,662	-				+0.0
2,830,740	-				+2.2
2,830,760	+				+0.2
2,830,760	+				-0.5
2,830,760	+				-2.1
2,830,761	-				+0.0
2,830,761	-				-2.7
2,830,838	+				+0.7
2,830,838	+				-2.9
2,830,839	-				+1.5
2,830,839	-				-0.5
2,830,839	-				-0.7
2,830,839	-				+0.5
2,830,861	+				-1.2
2,830,861	+				-0.3
2,830,861	+				+0.1
2,830,861	+				-0.6
2,830,862	-		IAI47_13370	0.10	-0.8
2,830,862	-		IAI47_13370	0.10	-1.3
2,830,893	-		IAI47_13370	0.11	-0.3
2,830,893	-		IAI47_13370	0.11	-1.5
2,830,901	+		IAI47_13370	0.12	-1.6
2,830,901	+		IAI47_13370	0.12	-0.9
2,830,901	+		IAI47_13370	0.12	+0.2
2,830,901	+		IAI47_13370	0.12	-1.8
2,830,901	+		IAI47_13370	0.12	-2.2
2,830,901	+		IAI47_13370	0.12	+0.2
2,830,901	+		IAI47_13370	0.12	-0.4
2,830,901	+		IAI47_13370	0.12	-2.0
2,830,902	-		IAI47_13370	0.12	-0.8
2,830,902	-		IAI47_13370	0.12	-1.7
2,830,902	-		IAI47_13370	0.12	-1.4
2,830,902	-		IAI47_13370	0.12	-1.6
2,830,905	+		IAI47_13370	0.12	-1.6
2,830,905	+		IAI47_13370	0.12	-0.5
2,830,905	+		IAI47_13370	0.12	-0.2
2,830,905	+		IAI47_13370	0.12	-0.4
2,830,911	+		IAI47_13370	0.12	-1.4
2,830,911	+		IAI47_13370	0.12	-0.4
2,830,912	-		IAI47_13370	0.12	-1.1
2,830,922	+		IAI47_13370	0.13	-0.9
2,830,934	+		IAI47_13370	0.13	-1.1
2,830,934	+		IAI47_13370	0.13	+1.6
2,830,935	-		IAI47_13370	0.13	+0.4
2,830,985	+		IAI47_13370	0.15	+1.5
2,830,986	-		IAI47_13370	0.15	-1.9
2,830,986	-		IAI47_13370	0.15	-2.2
2,830,987	+		IAI47_13370	0.15	-1.3
2,830,987	+		IAI47_13370	0.15	+1.2
2,830,987	+		IAI47_13370	0.15	-2.5
2,830,987	+		IAI47_13370	0.15	-1.9
2,830,987	+		IAI47_13370	0.15	-0.9
2,830,987	+		IAI47_13370	0.15	+0.1
2,830,988	-		IAI47_13370	0.15	-0.7
2,830,988	-		IAI47_13370	0.15	-2.2
2,830,988	-		IAI47_13370	0.15	-1.7
2,830,988	-		IAI47_13370	0.15	-1.9
2,830,988	-		IAI47_13370	0.15	-1.0
2,831,011	+		IAI47_13370	0.16	-1.2
2,831,012	-		IAI47_13370	0.17	+0.5
2,831,035	+		IAI47_13370	0.18	-2.6
2,831,035	+		IAI47_13370	0.18	-0.2
2,831,035	+		IAI47_13370	0.18	-1.4
2,831,035	+		IAI47_13370	0.18	-1.0
2,831,035	+		IAI47_13370	0.18	-1.0
2,831,035	+		IAI47_13370	0.18	-0.5
2,831,035	+		IAI47_13370	0.18	-1.6
2,831,035	+		IAI47_13370	0.18	-0.8
2,831,035	+		IAI47_13370	0.18	-0.8
2,831,035	+		IAI47_13370	0.18	+0.4
2,831,035	+		IAI47_13370	0.18	-0.2
2,831,035	+		IAI47_13370	0.18	-3.8
2,831,036	-		IAI47_13370	0.18	-1.2
2,831,036	-		IAI47_13370	0.18	-0.7
2,831,036	-		IAI47_13370	0.18	-2.2
2,831,036	-		IAI47_13370	0.18	-1.4
2,831,036	-		IAI47_13370	0.18	-2.6
2,831,036	-		IAI47_13370	0.18	+0.1
2,831,036	-		IAI47_13370	0.18	-1.7
2,831,036	-		IAI47_13370	0.18	-2.2
2,831,036	-		IAI47_13370	0.18	-0.4
2,831,036	-		IAI47_13370	0.18	-3.0
2,831,036	-		IAI47_13370	0.18	-1.2
2,831,036	-		IAI47_13370	0.18	-0.7
2,831,036	-		IAI47_13370	0.18	+0.3
2,831,038	+		IAI47_13370	0.18	+0.7
2,831,038	+		IAI47_13370	0.18	-1.2
2,831,038	+		IAI47_13370	0.18	-2.4
2,831,038	+		IAI47_13370	0.18	-2.2
2,831,038	+		IAI47_13370	0.18	-1.8
2,831,039	-		IAI47_13370	0.18	-2.7
2,831,039	-		IAI47_13370	0.18	-0.9
2,831,050	+		IAI47_13370	0.18	-1.0
2,831,050	+		IAI47_13370	0.18	-0.5
2,831,050	+		IAI47_13370	0.18	-1.8
2,831,050	+		IAI47_13370	0.18	+1.0
2,831,051	-		IAI47_13370	0.18	-0.9
2,831,074	+		IAI47_13370	0.19	-2.4
2,831,074	+		IAI47_13370	0.19	-1.3
2,831,074	+		IAI47_13370	0.19	-0.6
2,831,074	+		IAI47_13370	0.19	-0.3
2,831,074	+		IAI47_13370	0.19	+1.0
2,831,075	-		IAI47_13370	0.19	+0.5
2,831,101	+		IAI47_13370	0.20	-1.6
2,831,101	+		IAI47_13370	0.20	-2.3
2,831,101	+		IAI47_13370	0.20	-0.6
2,831,102	-		IAI47_13370	0.20	-0.3
2,831,104	+		IAI47_13370	0.21	-0.9
2,831,162	+		IAI47_13370	0.23	-2.1
2,831,162	+		IAI47_13370	0.23	-2.2
2,831,163	-		IAI47_13370	0.23	-1.7
2,831,163	-		IAI47_13370	0.23	-0.7
2,831,164	+		IAI47_13370	0.23	-1.7
2,831,164	+		IAI47_13370	0.23	-0.3
2,831,164	+		IAI47_13370	0.23	-0.5
2,831,165	-		IAI47_13370	0.23	+0.5
2,831,165	-		IAI47_13370	0.23	-1.4
2,831,165	-		IAI47_13370	0.23	-0.8
2,831,287	-		IAI47_13370	0.29	-1.0
2,831,287	-		IAI47_13370	0.29	-0.8
2,831,287	-		IAI47_13370	0.29	+0.8
2,831,310	-		IAI47_13370	0.30	+0.5
2,831,326	-		IAI47_13370	0.30	-0.5
2,831,326	-		IAI47_13370	0.30	-0.0
2,831,438	+		IAI47_13370	0.35	+0.3
2,831,477	+		IAI47_13370	0.37	-2.2
2,831,478	-		IAI47_13370	0.37	-1.1
2,831,478	-		IAI47_13370	0.37	+0.6
2,831,500	+		IAI47_13370	0.38	-0.7
2,831,500	+		IAI47_13370	0.38	+1.1
2,831,501	-		IAI47_13370	0.38	-1.3
2,831,501	-		IAI47_13370	0.38	-0.0
2,831,501	-		IAI47_13370	0.38	+0.1
2,831,557	+		IAI47_13370	0.40	+0.2
2,831,557	+		IAI47_13370	0.40	-1.0
2,831,558	-		IAI47_13370	0.40	+0.0
2,831,558	-		IAI47_13370	0.40	-2.2
2,831,558	-		IAI47_13370	0.40	-0.8
2,831,805	-		IAI47_13370	0.51	-1.9
2,831,832	+		IAI47_13370	0.52	-1.7
2,831,832	+		IAI47_13370	0.52	-0.1
2,831,832	+		IAI47_13370	0.52	-1.0
2,831,833	-		IAI47_13370	0.52	-2.0
2,831,833	-		IAI47_13370	0.52	-2.4
2,831,833	-		IAI47_13370	0.52	-0.2
2,831,842	+		IAI47_13370	0.53	-0.6
2,831,842	+		IAI47_13370	0.53	+1.2
2,831,852	+		IAI47_13370	0.53	+1.7
2,831,869	+		IAI47_13370	0.54	+0.2
2,831,869	+		IAI47_13370	0.54	-0.5
2,831,869	+		IAI47_13370	0.54	-1.5
2,831,870	-		IAI47_13370	0.54	+0.9
2,831,870	-		IAI47_13370	0.54	-0.9
2,831,879	+		IAI47_13370	0.54	+0.4
2,831,880	-		IAI47_13370	0.54	-0.1
2,831,918	+		IAI47_13370	0.56	-1.5
2,831,950	+		IAI47_13370	0.57	-0.7
2,831,950	+		IAI47_13370	0.57	-1.3
2,831,950	+		IAI47_13370	0.57	-0.7
2,831,950	+		IAI47_13370	0.57	-0.6
2,831,950	+		IAI47_13370	0.57	-1.6
2,831,951	-		IAI47_13370	0.57	-1.2
2,831,951	-		IAI47_13370	0.57	+0.6
2,831,951	-		IAI47_13370	0.57	+0.6
2,831,951	-		IAI47_13370	0.57	+0.8
2,831,951	-		IAI47_13370	0.57	+1.0
2,831,959	+		IAI47_13370	0.58	-1.7
2,831,960	-		IAI47_13370	0.58	-0.2
2,831,960	-		IAI47_13370	0.58	-0.9
2,831,960	-		IAI47_13370	0.58	+1.0
2,831,960	-		IAI47_13370	0.58	-0.3
2,831,960	-		IAI47_13370	0.58	+0.2
2,831,962	+		IAI47_13370	0.58	-0.9
2,831,962	+		IAI47_13370	0.58	-1.3
2,831,962	+		IAI47_13370	0.58	-1.3
2,832,057	-		IAI47_13370	0.62	-1.1
2,832,101	+		IAI47_13370	0.64	-1.4
2,832,102	-		IAI47_13370	0.64	+0.5
2,832,102	-		IAI47_13370	0.64	-2.3
2,832,212	-		IAI47_13370	0.69	+0.2
2,832,223	+		IAI47_13370	0.69	-2.4
2,832,223	+		IAI47_13370	0.69	+0.2
2,832,223	+		IAI47_13370	0.69	+0.5
2,832,224	-		IAI47_13370	0.69	-1.0
2,832,236	+		IAI47_13370	0.70	+0.4
2,832,236	+		IAI47_13370	0.70	-0.9
2,832,236	+		IAI47_13370	0.70	-1.7
2,832,236	+		IAI47_13370	0.70	-0.9
2,832,236	+		IAI47_13370	0.70	-2.0
2,832,236	+		IAI47_13370	0.70	-1.0
2,832,236	+		IAI47_13370	0.70	+0.6
2,832,236	+		IAI47_13370	0.70	-0.4
2,832,237	-		IAI47_13370	0.70	-0.1
2,832,237	-		IAI47_13370	0.70	+2.1
2,832,237	-		IAI47_13370	0.70	-2.4
2,832,237	-		IAI47_13370	0.70	+0.2
2,832,237	-		IAI47_13370	0.70	-1.6
2,832,265	+		IAI47_13370	0.71	-0.5
2,832,265	+		IAI47_13370	0.71	+0.0
2,832,265	+		IAI47_13370	0.71	-1.0
2,832,266	-		IAI47_13370	0.71	-2.5
2,832,266	-		IAI47_13370	0.71	-3.3
2,832,266	-		IAI47_13370	0.71	-1.1
2,832,266	-		IAI47_13370	0.71	-0.7
2,832,292	+		IAI47_13370	0.72	-2.2
2,832,292	+		IAI47_13370	0.72	-2.7
2,832,293	-		IAI47_13370	0.72	-2.7
2,832,321	+		IAI47_13370	0.73	-0.3
2,832,394	+		IAI47_13370	0.77	-2.7
2,832,394	+		IAI47_13370	0.77	+0.4
2,832,394	+		IAI47_13370	0.77	-0.5
2,832,394	+		IAI47_13370	0.77	-1.8
2,832,394	+		IAI47_13370	0.77	-0.6
2,832,394	+		IAI47_13370	0.77	-1.7
2,832,394	+		IAI47_13370	0.77	-0.2
2,832,394	+		IAI47_13370	0.77	-1.6
2,832,394	+		IAI47_13370	0.77	-0.9
2,832,394	+		IAI47_13370	0.77	-0.9
2,832,394	+		IAI47_13370	0.77	-2.7
2,832,394	+		IAI47_13370	0.77	-0.8
2,832,395	-		IAI47_13370	0.77	-0.8
2,832,395	-		IAI47_13370	0.77	-0.2
2,832,395	-		IAI47_13370	0.77	-0.9
2,832,395	-		IAI47_13370	0.77	+0.3
2,832,395	-		IAI47_13370	0.77	-0.5
2,832,395	-		IAI47_13370	0.77	+0.4
2,832,395	-		IAI47_13370	0.77	-1.8
2,832,398	+		IAI47_13370	0.77	-1.5
2,832,398	+		IAI47_13370	0.77	-1.0
2,832,398	+		IAI47_13370	0.77	-0.7
2,832,399	-		IAI47_13370	0.77	-1.4
2,832,399	-		IAI47_13370	0.77	+0.2
2,832,399	-		IAI47_13370	0.77	+0.9
2,832,399	-		IAI47_13370	0.77	-0.8
2,832,473	+		IAI47_13370	0.80	+0.0
2,832,473	+		IAI47_13370	0.80	-2.4
2,832,473	+		IAI47_13370	0.80	-2.5
2,832,473	+		IAI47_13370	0.80	-1.6
2,832,473	+		IAI47_13370	0.80	-0.5
2,832,474	-		IAI47_13370	0.80	-1.2
2,832,474	-		IAI47_13370	0.80	-0.8
2,832,474	-		IAI47_13370	0.80	-0.8
2,832,474	-		IAI47_13370	0.80	+0.7
2,832,499	+		IAI47_13370	0.81	+0.9
2,832,566	+		IAI47_13370	0.84	-2.4
2,832,684	-		IAI47_13370	0.89	-0.7
2,832,684	-		IAI47_13370	0.89	-0.0
2,832,686	+		IAI47_13370	0.89	-0.9
2,832,687	-		IAI47_13370	0.89	-0.8
2,832,687	-		IAI47_13370	0.89	-2.5
2,832,687	-		IAI47_13370	0.89	-1.8
2,832,687	-		IAI47_13370	0.89	-1.6
2,832,743	+				+1.7
2,832,762	+				+2.0
2,832,855	-				-2.0
2,832,874	-				-1.6
2,832,874	-				+0.9
2,832,909	-				+1.7
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