Strain Fitness in Pantoea sp. MT58 around IAI47_11530

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,439,471	+				-0.2
2,439,472	-				-0.8
2,439,473	+				+1.6
2,439,520	-				+2.0
2,439,540	-				+1.7
2,439,540	-				-0.7
2,439,541	+				+0.9
2,439,541	+				+0.3
2,439,542	-				-0.3
2,439,572	-				+0.2
2,439,572	-				+3.5
2,439,616	+		IAI47_11530	0.12	+1.8
2,439,617	-		IAI47_11530	0.12	+1.5
2,439,621	+		IAI47_11530	0.12	-0.0
2,439,621	+		IAI47_11530	0.12	-2.1
2,439,648	+		IAI47_11530	0.14	-0.5
2,439,648	+		IAI47_11530	0.14	+1.4
2,439,648	+		IAI47_11530	0.14	+0.3
2,439,649	-		IAI47_11530	0.14	-1.3
2,439,649	-		IAI47_11530	0.14	-1.3
2,439,649	-		IAI47_11530	0.14	+0.3
2,439,655	-		IAI47_11530	0.15	+0.6
2,439,679	-		IAI47_11530	0.17	-0.0
2,439,679	-		IAI47_11530	0.17	+0.4
2,439,730	-		IAI47_11530	0.20	-0.6
2,439,731	+		IAI47_11530	0.20	-1.0
2,439,745	-		IAI47_11530	0.22	-0.4
2,439,745	-		IAI47_11530	0.22	+1.1
2,439,745	-		IAI47_11530	0.22	-1.0
2,439,745	-		IAI47_11530	0.22	-0.0
2,439,747	+		IAI47_11530	0.22	+0.0
2,439,747	+		IAI47_11530	0.22	+1.4
2,439,774	+		IAI47_11530	0.24	+1.0
2,439,775	-		IAI47_11530	0.24	+1.0
2,439,775	-		IAI47_11530	0.24	+0.1
2,439,775	-		IAI47_11530	0.24	-0.4
2,439,775	-		IAI47_11530	0.24	+0.2
2,439,775	-		IAI47_11530	0.24	+0.2
2,439,775	-		IAI47_11530	0.24	+0.2
2,439,796	+		IAI47_11530	0.25	+1.0
2,439,796	+		IAI47_11530	0.25	-2.0
2,439,797	-		IAI47_11530	0.25	-0.5
2,439,797	-		IAI47_11530	0.25	-1.1
2,439,808	+		IAI47_11530	0.26	-0.7
2,439,826	+		IAI47_11530	0.28	+0.5
2,439,826	+		IAI47_11530	0.28	-1.0
2,439,826	+		IAI47_11530	0.28	-0.7
2,439,826	+		IAI47_11530	0.28	+0.1
2,439,826	+		IAI47_11530	0.28	-0.4
2,439,826	+		IAI47_11530	0.28	+0.2
2,439,827	-		IAI47_11530	0.28	-0.3
2,439,827	-		IAI47_11530	0.28	-0.5
2,439,827	-		IAI47_11530	0.28	-0.9
2,439,827	-		IAI47_11530	0.28	+0.2
2,439,827	-		IAI47_11530	0.28	+0.9
2,439,827	-		IAI47_11530	0.28	-0.7
2,439,827	-		IAI47_11530	0.28	-2.0
2,439,838	+		IAI47_11530	0.28	-1.5
2,439,839	-		IAI47_11530	0.29	-1.7
2,439,839	-		IAI47_11530	0.29	-0.6
2,439,839	-		IAI47_11530	0.29	+0.6
2,439,839	-		IAI47_11530	0.29	+1.3
2,439,839	-		IAI47_11530	0.29	+1.1
2,439,839	-		IAI47_11530	0.29	+1.2
2,439,849	-		IAI47_11530	0.29	+0.5
2,439,864	+		IAI47_11530	0.30	+0.2
2,439,866	+		IAI47_11530	0.31	-0.1
2,439,866	+		IAI47_11530	0.31	-0.4
2,439,866	+		IAI47_11530	0.31	-0.8
2,439,866	+		IAI47_11530	0.31	-1.0
2,439,867	-		IAI47_11530	0.31	+1.0
2,439,872	+		IAI47_11530	0.31	+0.5
2,439,872	+		IAI47_11530	0.31	+1.5
2,439,872	+		IAI47_11530	0.31	+0.2
2,439,872	+		IAI47_11530	0.31	+0.4
2,439,872	+		IAI47_11530	0.31	-0.4
2,439,872	+		IAI47_11530	0.31	-1.1
2,439,872	+		IAI47_11530	0.31	-1.8
2,439,872	+		IAI47_11530	0.31	-0.4
2,439,873	-		IAI47_11530	0.31	-2.4
2,439,873	-		IAI47_11530	0.31	-0.6
2,439,873	-		IAI47_11530	0.31	+0.6
2,439,873	-		IAI47_11530	0.31	-0.2
2,439,873	-		IAI47_11530	0.31	-0.8
2,439,873	-		IAI47_11530	0.31	-0.5
2,439,873	-		IAI47_11530	0.31	+0.5
2,439,873	-		IAI47_11530	0.31	+0.1
2,439,873	-		IAI47_11530	0.31	+1.9
2,439,874	+		IAI47_11530	0.31	+1.3
2,439,874	+		IAI47_11530	0.31	+0.3
2,439,874	+		IAI47_11530	0.31	+0.6
2,439,874	+		IAI47_11530	0.31	+0.7
2,439,874	+		IAI47_11530	0.31	-0.3
2,439,874	+		IAI47_11530	0.31	+0.1
2,439,874	+		IAI47_11530	0.31	-1.5
2,439,874	+		IAI47_11530	0.31	-1.8
2,439,874	+		IAI47_11530	0.31	-0.1
2,439,875	-		IAI47_11530	0.31	+0.4
2,439,875	-		IAI47_11530	0.31	+1.4
2,439,875	-		IAI47_11530	0.31	+0.1
2,439,875	-		IAI47_11530	0.31	+0.7
2,439,875	-		IAI47_11530	0.31	+1.6
2,439,875	-		IAI47_11530	0.31	+0.6
2,439,875	-		IAI47_11530	0.31	-1.4
2,439,897	+		IAI47_11530	0.33	-2.0
2,439,898	-		IAI47_11530	0.33	+0.1
2,439,921	+		IAI47_11530	0.35	-0.3
2,439,922	-		IAI47_11530	0.35	-0.1
2,440,021	+		IAI47_11530	0.42	+0.7
2,440,022	-		IAI47_11530	0.42	+0.7
2,440,134	+		IAI47_11530	0.51	-1.1
2,440,134	+		IAI47_11530	0.51	-2.4
2,440,197	-		IAI47_11530	0.55	+0.3
2,440,197	-		IAI47_11530	0.55	-0.3
2,440,197	-		IAI47_11530	0.55	-0.2
2,440,197	-		IAI47_11530	0.55	-0.9
2,440,294	+		IAI47_11530	0.63	+0.7
2,440,322	-		IAI47_11530	0.65	+1.1
2,440,351	-		IAI47_11530	0.67	-0.5
2,440,351	-		IAI47_11530	0.67	-0.4
2,440,351	-		IAI47_11530	0.67	+1.4
2,440,375	+		IAI47_11530	0.69	+1.1
2,440,375	+		IAI47_11530	0.69	-1.0
2,440,375	+		IAI47_11530	0.69	-1.6
2,440,425	+		IAI47_11530	0.72	-0.1
2,440,429	-		IAI47_11530	0.73	+1.0
2,440,431	+		IAI47_11530	0.73	-0.7
2,440,431	+		IAI47_11530	0.73	+0.4
2,440,432	-		IAI47_11530	0.73	-0.5
2,440,513	+		IAI47_11530	0.79	-0.0
2,440,530	+		IAI47_11530	0.80	+0.2
2,440,572	+		IAI47_11530	0.83	+0.2
2,440,572	+		IAI47_11530	0.83	-1.0
2,440,572	+		IAI47_11530	0.83	-0.9
2,440,572	+		IAI47_11530	0.83	-2.4
2,440,572	+		IAI47_11530	0.83	+0.4
2,440,600	+		IAI47_11530	0.85	+1.4
2,440,600	+		IAI47_11530	0.85	-0.2
2,440,651	+		IAI47_11530	0.89	-0.9
2,440,652	-		IAI47_11530	0.89	-0.2
2,440,652	-		IAI47_11530	0.89	+1.2
2,440,652	-		IAI47_11530	0.89	-1.5
2,440,678	+				+2.0
2,440,678	+				+0.6
2,440,678	+				-0.7
2,440,679	-				-0.0
2,440,679	-				+0.4
2,440,699	+				-1.6
2,440,700	-				-0.4
2,440,741	-				-1.0
2,440,741	-				-0.3
2,440,810	-				+0.0
2,440,810	-				+0.7
2,440,810	-				+0.2
2,440,810	-				-1.8
2,440,810	-				+0.2
2,440,810	-				-0.3
2,440,810	-				-0.5
2,440,810	-				-0.0
2,440,810	-				-0.0
2,440,891	-		IAI47_11535	0.12	-1.5
2,440,891	-		IAI47_11535	0.12	-1.9
2,440,898	-		IAI47_11535	0.13	-2.3
2,440,898	-		IAI47_11535	0.13	-0.6
2,440,898	-		IAI47_11535	0.13	+0.2