Strain Fitness in Pantoea sp. MT58 around IAI47_09695

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,051,054	+				-0.0
2,051,054	+				-0.4
2,051,085	+				+0.6
2,051,128	-				+1.6
2,051,145	+				-0.9
2,051,145	+				-1.6
2,051,145	+				+0.1
2,051,145	+				+1.9
2,051,145	+				-0.2
2,051,146	-				+0.6
2,051,200	+				-0.4
2,051,263	-		IAI47_09690	0.12	-0.1
2,051,263	-		IAI47_09690	0.12	+1.8
2,051,266	+		IAI47_09690	0.12	+1.5
2,051,266	+		IAI47_09690	0.12	+0.3
2,051,266	+		IAI47_09690	0.12	-0.7
2,051,266	+		IAI47_09690	0.12	-0.6
2,051,267	-		IAI47_09690	0.12	+0.7
2,051,267	-		IAI47_09690	0.12	+1.0
2,051,267	-		IAI47_09690	0.12	-0.6
2,051,267	-		IAI47_09690	0.12	-0.4
2,051,267	-		IAI47_09690	0.12	+0.5
2,051,267	-		IAI47_09690	0.12	-0.2
2,051,303	-		IAI47_09690	0.17	+0.6
2,051,331	+		IAI47_09690	0.20	+2.6
2,051,331	+		IAI47_09690	0.20	+1.1
2,051,364	+				-0.2
2,051,365	-		IAI47_09690	0.24	-1.9
2,051,365	-		IAI47_09690	0.24	+1.9
2,051,481	-		IAI47_09690	0.37	-1.0
2,051,576	+		IAI47_09690	0.48	-0.7
2,051,766	+		IAI47_09690	0.70	-1.7
2,051,767	-		IAI47_09690	0.70	+0.7
2,051,776	+		IAI47_09690	0.71	+1.5
2,051,805	+		IAI47_09690	0.75	+2.6
2,051,805	+		IAI47_09690	0.75	+0.6
2,051,805	+		IAI47_09690	0.75	+1.0
2,051,805	+		IAI47_09690	0.75	-0.7
2,051,806	-		IAI47_09690	0.75	-1.2
2,051,852	+		IAI47_09690	0.80	+0.0
2,051,852	+		IAI47_09690	0.80	+1.3
2,051,853	-		IAI47_09690	0.80	-0.1
2,051,853	-		IAI47_09690	0.80	-0.4
2,051,853	-		IAI47_09690	0.80	+0.1
2,051,854	+		IAI47_09690	0.80	-1.4
2,051,854	+		IAI47_09690	0.80	+0.1
2,051,854	+		IAI47_09690	0.80	+1.1
2,051,854	+		IAI47_09690	0.80	-1.7
2,051,855	-		IAI47_09690	0.80	-0.1
2,051,855	-		IAI47_09690	0.80	+0.1
2,051,855	-		IAI47_09690	0.80	+0.2
2,051,855	-		IAI47_09690	0.80	+0.6
2,051,855	-		IAI47_09690	0.80	-0.7
2,051,878	+		IAI47_09690	0.83	-0.4
2,051,879	-		IAI47_09690	0.83	+1.6
2,051,922	+		IAI47_09690	0.88	-0.2
2,051,984	-				+0.8
2,051,984	-				+0.9
2,051,998	-				-0.4
2,052,014	+				-0.2
2,052,014	+				+1.0
2,052,014	+				-2.8
2,052,015	-				+0.4
2,052,015	-				-0.2
2,052,038	+				+1.1
2,052,039	-				-0.9
2,052,039	-				+1.3
2,052,039	-				-0.9
2,052,138	+		IAI47_09695	0.12	+1.0
2,052,144	+		IAI47_09695	0.13	-1.6
2,052,145	-		IAI47_09695	0.13	+0.4
2,052,145	-		IAI47_09695	0.13	-2.4
2,052,145	-		IAI47_09695	0.13	+0.7
2,052,153	+		IAI47_09695	0.14	+1.1
2,052,153	+		IAI47_09695	0.14	-0.2
2,052,154	-		IAI47_09695	0.14	+0.1
2,052,154	-		IAI47_09695	0.14	+0.1
2,052,184	+		IAI47_09695	0.18	-1.1
2,052,184	+		IAI47_09695	0.18	+0.4
2,052,184	+		IAI47_09695	0.18	+0.8
2,052,185	-		IAI47_09695	0.18	-1.6
2,052,187	+		IAI47_09695	0.18	-0.4
2,052,201	+		IAI47_09695	0.20	-0.1
2,052,201	+		IAI47_09695	0.20	+1.4
2,052,201	+		IAI47_09695	0.20	-1.0
2,052,206	+		IAI47_09695	0.21	-0.7
2,052,207	-		IAI47_09695	0.21	-0.2
2,052,256	-		IAI47_09695	0.27	+0.7
2,052,256	-		IAI47_09695	0.27	-1.4
2,052,311	+		IAI47_09695	0.33	-0.3
2,052,311	+		IAI47_09695	0.33	-0.2
2,052,311	+		IAI47_09695	0.33	-0.4
2,052,312	-		IAI47_09695	0.33	+1.0
2,052,312	-		IAI47_09695	0.33	-0.5
2,052,312	-		IAI47_09695	0.33	-1.1
2,052,312	-		IAI47_09695	0.33	+0.8
2,052,312	-		IAI47_09695	0.33	-0.9
2,052,410	-		IAI47_09695	0.45	-0.7
2,052,410	-		IAI47_09695	0.45	-1.6
2,052,530	+		IAI47_09695	0.60	-0.2
2,052,531	-		IAI47_09695	0.60	-1.9
2,052,557	-		IAI47_09695	0.63	-0.3
2,052,557	-		IAI47_09695	0.63	-0.8
2,052,565	+		IAI47_09695	0.64	+0.3
2,052,566	-		IAI47_09695	0.64	+1.5
2,052,566	-		IAI47_09695	0.64	+0.6
2,052,628	-		IAI47_09695	0.72	-0.1
2,052,628	-		IAI47_09695	0.72	-1.6
2,052,628	-		IAI47_09695	0.72	-1.1
2,052,641	+		IAI47_09695	0.73	+1.3
2,052,641	+		IAI47_09695	0.73	+0.4
2,052,641	+		IAI47_09695	0.73	+0.3
2,052,641	+		IAI47_09695	0.73	+0.2
2,052,642	-		IAI47_09695	0.74	-2.1
2,052,642	-		IAI47_09695	0.74	-0.3
2,052,642	-		IAI47_09695	0.74	+0.6
2,052,642	-		IAI47_09695	0.74	-1.0
2,052,712	+		IAI47_09695	0.82	-1.6
2,052,712	+		IAI47_09695	0.82	-0.7
2,052,712	+		IAI47_09695	0.82	+0.1
2,052,713	-		IAI47_09695	0.82	+0.7
2,052,713	-		IAI47_09695	0.82	-2.8
2,052,713	-		IAI47_09695	0.82	+0.8
2,052,713	-		IAI47_09695	0.82	-1.6
2,052,802	+				+1.0
2,052,802	+				+0.6
2,052,802	+				-0.2
2,052,802	+				-0.6
2,052,802	+				+0.1
2,052,802	+				-1.6
2,052,802	+				-0.3
2,052,802	+				-0.4
2,052,802	+				-0.4
2,052,802	+				+0.7
2,052,802	+				-1.6
2,052,802	+				+0.1
2,052,802	+				+1.1
2,052,803	-				-1.1
2,052,803	-				-0.8
2,052,803	-				-2.2
2,052,803	-				+0.3
2,052,803	-				+1.3
2,052,803	-				-2.9
2,052,803	-				+0.6
2,052,803	-				-1.9
2,052,803	-				-0.4
2,052,803	-				-0.2
2,052,803	-				+0.1
2,052,803	-				+0.2
2,052,803	-				+0.0
2,052,803	-				+1.0
2,052,803	-				+1.4
2,052,803	-				-0.0
2,052,803	-				-0.0
2,052,803	-				+0.5
2,052,808	+				-1.0
2,052,809	-				-1.9
2,052,815	+				+1.0
2,052,816	-				+1.3
2,052,872	+				+0.2
2,052,878	-				-1.1
2,052,897	+				+0.5
2,052,897	+				+0.5
2,052,897	+				+0.1
2,052,917	+				-0.7
2,052,917	+				-0.6
2,052,917	+				-0.3
2,052,918	-				-2.7
2,052,918	-				-1.3
2,052,918	-				-0.5
2,052,918	-				-0.1
2,052,918	-				-0.7
2,052,968	+				-0.0
2,052,982	-				+0.7
2,053,106	-				-0.4
2,053,203	+				+1.1
2,053,263	+				+1.8
2,053,269	+				+1.3
2,053,269	+				+1.1
2,053,269	+				+1.4
2,053,270	-				-0.4
2,053,270	-				+1.0
2,053,291	+				+0.9
2,053,349	+		IAI47_09700	0.14	-0.1
2,053,349	+		IAI47_09700	0.14	-0.2
2,053,349	+		IAI47_09700	0.14	+1.5
2,053,349	+		IAI47_09700	0.14	-1.8
2,053,350	-		IAI47_09700	0.14	+0.1
2,053,350	-		IAI47_09700	0.14	-0.7
2,053,350	-		IAI47_09700	0.14	+0.3
2,053,350	-		IAI47_09700	0.14	-0.3
2,053,350	-		IAI47_09700	0.14	+0.0
2,053,404	+		IAI47_09700	0.17	+1.0
2,053,404	+		IAI47_09700	0.17	+1.1
2,053,404	+		IAI47_09700	0.17	+2.4
2,053,404	+		IAI47_09700	0.17	-0.2
2,053,404	+		IAI47_09700	0.17	+0.1
2,053,405	-		IAI47_09700	0.17	+1.8
2,053,405	-		IAI47_09700	0.17	-1.3
2,053,405	-		IAI47_09700	0.17	-0.5
2,053,453	+		IAI47_09700	0.21	-0.9
2,053,453	+		IAI47_09700	0.21	-2.2
2,053,515	+		IAI47_09700	0.25	+0.9
2,053,515	+		IAI47_09700	0.25	-0.0
2,053,515	+		IAI47_09700	0.25	+1.5
2,053,515	+		IAI47_09700	0.25	+1.7
2,053,516	-		IAI47_09700	0.25	+0.6
2,053,516	-		IAI47_09700	0.25	+1.6
2,053,516	-		IAI47_09700	0.25	-0.7
2,053,516	-		IAI47_09700	0.25	+0.7
2,053,519	+		IAI47_09700	0.25	+1.4
2,053,519	+		IAI47_09700	0.25	+1.4
2,053,519	+		IAI47_09700	0.25	-2.0
2,053,519	+		IAI47_09700	0.25	+0.6
2,053,519	+		IAI47_09700	0.25	+0.6
2,053,519	+		IAI47_09700	0.25	-0.7
2,053,520	-		IAI47_09700	0.25	-2.8
2,053,520	-		IAI47_09700	0.25	-0.1
2,053,520	-		IAI47_09700	0.25	+0.0
2,053,551	+		IAI47_09700	0.27	+1.1
2,053,552	-		IAI47_09700	0.27	-0.3
2,053,610	+		IAI47_09700	0.31	-1.8
2,053,610	+		IAI47_09700	0.31	-0.3
2,053,610	+		IAI47_09700	0.31	+0.7
2,053,610	+		IAI47_09700	0.31	-0.2
2,053,611	-		IAI47_09700	0.31	-1.1
2,053,611	-		IAI47_09700	0.31	+0.3
2,053,611	-		IAI47_09700	0.31	-1.0
2,053,613	+		IAI47_09700	0.31	-0.9
2,053,613	+		IAI47_09700	0.31	+0.0
2,053,613	+		IAI47_09700	0.31	-2.8
2,053,614	-		IAI47_09700	0.32	+1.1
2,053,614	-		IAI47_09700	0.32	+3.6
2,053,614	-		IAI47_09700	0.32	-0.2
2,053,637	-		IAI47_09700	0.33	-0.1
2,053,637	-		IAI47_09700	0.33	-1.4
2,053,665	+		IAI47_09700	0.35	+1.0
2,053,665	+		IAI47_09700	0.35	+0.1
2,053,665	+		IAI47_09700	0.35	+0.6
2,053,666	-		IAI47_09700	0.35	+1.0
2,053,666	-		IAI47_09700	0.35	-0.4
2,053,666	-		IAI47_09700	0.35	-0.9
2,053,675	+		IAI47_09700	0.36	-1.0
2,053,675	+		IAI47_09700	0.36	+1.4
2,053,675	+		IAI47_09700	0.36	+0.8
2,053,675	+		IAI47_09700	0.36	-0.7
2,053,676	-		IAI47_09700	0.36	-0.9
2,053,690	-		IAI47_09700	0.37	+0.1
2,053,708	-		IAI47_09700	0.38	-1.2
2,053,826	+		IAI47_09700	0.46	-0.8