Strain Fitness in Pantoea sp. MT58 around IAI47_05010

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,052,627	+				-0.5
1,052,628	-				-0.6
1,052,628	-				+0.2
1,052,628	-				+0.7
1,052,628	-				+3.4
1,052,665	-				+0.1
1,052,665	-				-1.6
1,052,665	-				+0.8
1,052,684	+				+1.5
1,052,685	-				+0.5
1,052,691	-				+1.6
1,052,698	+				+0.3
1,052,699	-				+0.5
1,052,702	-				-0.5
1,052,711	-				-1.0
1,052,712	+				+0.9
1,052,738	-				-1.8
1,052,738	-				+0.8
1,052,738	-				+0.1
1,052,781	+				-0.6
1,052,781	+				-0.0
1,052,781	+				+0.4
1,052,781	+				+0.9
1,052,782	-				-0.1
1,052,788	-				+0.1
1,052,788	-				+3.0
1,052,788	-				-0.3
1,052,788	-				-1.1
1,052,886	+				-0.1
1,052,886	+				-0.4
1,052,886	+				-1.1
1,052,886	+				+1.0
1,052,887	-		IAI47_05010	0.10	+0.4
1,052,887	-		IAI47_05010	0.10	+0.1
1,053,102	+		IAI47_05010	0.27	+0.5
1,053,102	+		IAI47_05010	0.27	-0.1
1,053,102	+		IAI47_05010	0.27	+0.2
1,053,103	-		IAI47_05010	0.27	+1.6
1,053,103	-		IAI47_05010	0.27	-0.3
1,053,190	+		IAI47_05010	0.34	-0.5
1,053,190	+		IAI47_05010	0.34	-1.4
1,053,190	+		IAI47_05010	0.34	-0.6
1,053,190	+		IAI47_05010	0.34	-0.1
1,053,190	+		IAI47_05010	0.34	-0.0
1,053,191	-		IAI47_05010	0.34	+0.4
1,053,191	-		IAI47_05010	0.34	-0.5
1,053,195	+		IAI47_05010	0.34	-1.5
1,053,195	+		IAI47_05010	0.34	+0.8
1,053,195	+		IAI47_05010	0.34	+1.0
1,053,195	+		IAI47_05010	0.34	-1.3
1,053,196	-		IAI47_05010	0.34	-0.4
1,053,198	+		IAI47_05010	0.34	-0.3
1,053,198	+		IAI47_05010	0.34	-1.2
1,053,198	+		IAI47_05010	0.34	-1.9
1,053,198	+		IAI47_05010	0.34	+0.5
1,053,198	+		IAI47_05010	0.34	-0.3
1,053,199	-		IAI47_05010	0.34	+0.2
1,053,199	-		IAI47_05010	0.34	-1.4
1,053,199	-		IAI47_05010	0.34	-2.4
1,053,229	+		IAI47_05010	0.37	+0.5
1,053,229	+		IAI47_05010	0.37	-0.7
1,053,229	+		IAI47_05010	0.37	+1.0
1,053,229	+		IAI47_05010	0.37	+0.2
1,053,229	+		IAI47_05010	0.37	-0.9
1,053,229	+		IAI47_05010	0.37	-0.6
1,053,230	-		IAI47_05010	0.37	+0.7
1,053,230	-		IAI47_05010	0.37	-3.0
1,053,230	-		IAI47_05010	0.37	-0.9
1,053,230	-		IAI47_05010	0.37	+0.2
1,053,230	-		IAI47_05010	0.37	+0.9
1,053,230	-		IAI47_05010	0.37	+0.2
1,053,230	-		IAI47_05010	0.37	-0.2
1,053,230	-		IAI47_05010	0.37	-1.2
1,053,230	-		IAI47_05010	0.37	-1.0
1,053,231	+		IAI47_05010	0.37	+0.8
1,053,231	+		IAI47_05010	0.37	+0.6
1,053,231	+		IAI47_05010	0.37	-1.0
1,053,231	+		IAI47_05010	0.37	-0.6
1,053,231	+		IAI47_05010	0.37	+0.5
1,053,231	+		IAI47_05010	0.37	-0.8
1,053,231	+		IAI47_05010	0.37	+1.1
1,053,231	+		IAI47_05010	0.37	+0.1
1,053,231	+		IAI47_05010	0.37	-1.7
1,053,231	+		IAI47_05010	0.37	+1.2
1,053,232	-		IAI47_05010	0.37	-2.4
1,053,232	-		IAI47_05010	0.37	+0.0
1,053,232	-		IAI47_05010	0.37	-1.0
1,053,232	-		IAI47_05010	0.37	-0.0
1,053,232	-		IAI47_05010	0.37	-0.5
1,053,232	-		IAI47_05010	0.37	+1.6
1,053,243	+		IAI47_05010	0.38	-0.9
1,053,243	+		IAI47_05010	0.38	-0.3
1,053,243	+		IAI47_05010	0.38	-0.8
1,053,243	+		IAI47_05010	0.38	-0.8
1,053,243	+		IAI47_05010	0.38	-1.6
1,053,243	+		IAI47_05010	0.38	-0.9
1,053,244	-		IAI47_05010	0.38	-0.8
1,053,244	-		IAI47_05010	0.38	-0.0
1,053,244	-		IAI47_05010	0.38	-2.0
1,053,278	-		IAI47_05010	0.40	-0.4
1,053,292	+		IAI47_05010	0.41	-0.9
1,053,292	+		IAI47_05010	0.41	-0.3
1,053,326	-		IAI47_05010	0.44	-1.8
1,053,343	-		IAI47_05010	0.45	+1.0
1,053,351	+		IAI47_05010	0.46	-0.2
1,053,351	+		IAI47_05010	0.46	-0.6
1,053,351	+		IAI47_05010	0.46	-1.0
1,053,351	+		IAI47_05010	0.46	+1.0
1,053,352	-		IAI47_05010	0.46	+1.0
1,053,352	-		IAI47_05010	0.46	+1.3
1,053,352	-		IAI47_05010	0.46	-1.7
1,053,352	-		IAI47_05010	0.46	+1.3
1,053,393	+		IAI47_05010	0.49	-0.4
1,053,393	+		IAI47_05010	0.49	-0.4
1,053,394	-		IAI47_05010	0.49	-0.1
1,053,394	-		IAI47_05010	0.49	-0.1
1,053,471	+		IAI47_05010	0.55	-0.1
1,053,471	+		IAI47_05010	0.55	+0.7
1,053,472	-		IAI47_05010	0.55	+1.0
1,053,472	-		IAI47_05010	0.55	+0.8
1,053,510	+		IAI47_05010	0.58	-0.2
1,053,510	+		IAI47_05010	0.58	-1.8
1,053,510	+		IAI47_05010	0.58	-0.9
1,053,510	+		IAI47_05010	0.58	-2.2
1,053,510	+		IAI47_05010	0.58	-0.7
1,053,510	+		IAI47_05010	0.58	-0.8
1,053,511	-		IAI47_05010	0.59	+2.5
1,053,511	-		IAI47_05010	0.59	-0.4
1,053,511	-		IAI47_05010	0.59	-2.0
1,053,511	-		IAI47_05010	0.59	+0.3
1,053,511	-		IAI47_05010	0.59	-1.5
1,053,546	+		IAI47_05010	0.61	+1.2
1,053,546	+		IAI47_05010	0.61	-0.5
1,053,546	+		IAI47_05010	0.61	+0.3
1,053,547	-		IAI47_05010	0.61	-1.4
1,053,547	-		IAI47_05010	0.61	-0.6
1,053,547	-		IAI47_05010	0.61	-2.2
1,053,709	+		IAI47_05010	0.74	-2.3
1,053,709	+		IAI47_05010	0.74	-0.3
1,053,710	-		IAI47_05010	0.74	+1.6
1,053,710	-		IAI47_05010	0.74	-0.3
1,053,831	+		IAI47_05010	0.83	-0.2
1,053,846	+		IAI47_05010	0.85	-1.1
1,053,846	+		IAI47_05010	0.85	+1.6
1,053,846	+		IAI47_05010	0.85	+0.0
1,053,846	+		IAI47_05010	0.85	+0.0
1,053,846	+		IAI47_05010	0.85	+1.4
1,053,847	-		IAI47_05010	0.85	-0.6
1,053,847	-		IAI47_05010	0.85	-2.0
1,053,847	-		IAI47_05010	0.85	-0.5
1,053,847	-		IAI47_05010	0.85	+0.3
1,053,849	+		IAI47_05010	0.85	-1.4
1,053,849	+		IAI47_05010	0.85	+0.7
1,053,849	+		IAI47_05010	0.85	-1.2
1,053,849	+		IAI47_05010	0.85	+0.4
1,053,849	+		IAI47_05010	0.85	-0.5
1,053,849	+		IAI47_05010	0.85	+0.8
1,053,849	+		IAI47_05010	0.85	+1.2
1,053,922	+				-0.0
1,053,922	+				+0.6
1,053,922	+				-1.2
1,053,923	-				+0.8
1,053,923	-				+1.4
1,053,923	-				-0.0
1,053,923	-				+2.3
1,053,961	+				-0.0
1,053,961	+				+0.7
1,053,961	+				-0.2
1,053,961	+				+0.9
1,053,962	-				+1.1
1,054,035	-				-0.8
1,054,042	+				-1.0
1,054,104	+				+0.0
1,054,104	+				+0.3
1,054,104	+				-1.4
1,054,104	+				-0.0
1,054,104	+				+1.7
1,054,104	+				-0.4
1,054,104	+				-1.5
1,054,104	+				+3.8
1,054,104	+				+0.6
1,054,105	-				-1.7
1,054,105	-				-1.5
1,054,213	-		IAI47_05015	0.14	-1.4
1,054,284	+		IAI47_05015	0.23	-1.4
1,054,284	+		IAI47_05015	0.23	+1.7
1,054,284	+		IAI47_05015	0.23	-1.3
1,054,285	-		IAI47_05015	0.24	+0.0
1,054,285	-		IAI47_05015	0.24	+1.7
1,054,285	-		IAI47_05015	0.24	+0.0
1,054,285	-		IAI47_05015	0.24	-1.4
1,054,359	-		IAI47_05015	0.33	+0.2
1,054,478	+		IAI47_05015	0.49	+0.2
1,054,584	+		IAI47_05015	0.63	+1.0
1,054,584	+		IAI47_05015	0.63	-0.4
1,054,584	+		IAI47_05015	0.63	+0.4
1,054,584	+		IAI47_05015	0.63	+0.0
1,054,584	+		IAI47_05015	0.63	+0.4
1,054,584	+		IAI47_05015	0.63	-0.0
1,054,584	+		IAI47_05015	0.63	+1.0
1,054,585	-		IAI47_05015	0.63	+0.6
1,054,585	-		IAI47_05015	0.63	+1.3
1,054,585	-		IAI47_05015	0.63	-0.0
1,054,585	-		IAI47_05015	0.63	-1.3
1,054,605	+		IAI47_05015	0.65	+0.6
1,054,605	+		IAI47_05015	0.65	-0.5
1,054,605	+		IAI47_05015	0.65	-0.4
1,054,606	-		IAI47_05015	0.65	-0.4
1,054,641	+		IAI47_05015	0.70	-0.3
1,054,641	+		IAI47_05015	0.70	+0.5
1,054,641	+		IAI47_05015	0.70	+0.4
1,054,642	-		IAI47_05015	0.70	-0.5
1,054,642	-		IAI47_05015	0.70	+0.7
1,054,642	-		IAI47_05015	0.70	+0.0
1,054,646	+		IAI47_05015	0.71	+0.3
1,054,646	+		IAI47_05015	0.71	+1.4
1,054,646	+		IAI47_05015	0.71	-1.4
1,054,647	-		IAI47_05015	0.71	-0.4
1,054,716	+		IAI47_05015	0.80	-0.1
1,054,717	-		IAI47_05015	0.80	-2.0
1,054,743	+		IAI47_05015	0.83	+1.4
1,054,743	+		IAI47_05015	0.83	+0.2
1,054,743	+		IAI47_05015	0.83	+0.1
1,054,743	+		IAI47_05015	0.83	-1.1
1,054,810	+				-0.8
1,054,810	+				-1.6
1,054,810	+				-0.6
1,054,810	+				-1.0
1,054,810	+				+1.1
1,054,810	+				+0.6
1,054,810	+				-1.8
1,054,810	+				+1.1
1,054,810	+				-2.2
1,054,810	+				+0.2
1,054,811	-				+0.4
1,054,811	-				+0.6
1,054,811	-				+0.4
1,054,811	-				-0.6
1,054,811	-				+0.8
1,054,811	-				-0.8
1,054,863	+				+1.2
1,054,864	-				-0.8
1,054,864	-				-0.6
1,054,864	-				-2.0
1,054,879	+				-3.1
1,054,880	-				-2.6
1,054,880	-				-1.2
1,054,880	-				-0.8
1,054,880	-				+0.0
1,054,913	-				+0.2
1,054,922	+				-0.2
1,054,922	+				-0.6
1,054,922	+				+0.6
1,054,922	+				-0.3
1,054,966	+				-2.1
1,054,966	+				-0.3
1,054,966	+				-0.2
1,054,966	+				+2.9
1,054,967	-				+0.1
1,054,967	-				+2.2
1,054,967	-				+0.2
1,054,967	-				+0.7
1,055,025	+		IAI47_05020	0.14	+0.6