Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS00775

Experiment: McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM
146,962	+				-1.8
146,991	-				-1.6
146,991	-				+2.3
146,991	-				+1.0
146,991	-				+0.8
146,991	-				-3.0
146,991	-				+2.3
146,992	+				+2.0
146,992	+				-3.6
146,992	+				+0.1
146,992	+				-0.8
146,992	+				-2.5
146,992	+				+0.3
146,993	-				+1.3
146,993	-				+1.3
146,993	-				+1.5
146,993	-				+0.4
146,994	+				+3.2
146,994	+				+1.7
146,994	+				-3.6
146,995	-				+2.2
146,995	-				+3.7
146,995	-				+3.6
146,995	-				+0.7
146,996	+				+0.8
146,996	+				-1.4
146,996	+				+0.4
146,996	+				+2.6
146,996	+				-1.0
146,996	+				-1.2
146,996	+				+1.2
146,996	+				+1.0
147,023	-				-2.8
147,034	-				-2.8
147,035	+				-2.0
147,039	-				+0.9
147,039	-				+0.9
147,040	+				+0.6
147,040	+				+4.1
147,041	-				+2.2
147,041	-				-1.8
147,042	+				+0.2
147,042	+				-0.5
147,042	+				-2.8
147,042	+				+0.4
147,043	-				-2.1
147,043	-				-0.8
147,044	+				+0.9
147,044	+				-3.4
147,044	+				+3.6
147,044	+				+1.4
147,046	-				-0.1
147,047	+				-2.1
147,047	+				-1.6
147,047	+				-2.3
147,047	+				-0.2
147,047	+				-1.2
147,048	-				-2.3
147,048	-				+0.1
147,048	-				+0.0
147,048	-				-0.2
147,049	+				-0.6
147,049	+				+0.1
147,060	+				+1.5
147,076	-				+2.9
147,099	-				-2.6
147,099	-				+0.4
147,099	-				+3.8
147,099	-				+3.2
147,099	-				+2.5
147,100	+				+0.3
147,100	+				+1.9
147,100	+				-3.0
147,105	-				+1.3
147,105	-				-0.4
147,105	-				+1.5
147,105	-				-1.1
147,106	+				-0.2
147,109	+				+1.6
147,118	-				+0.4
147,118	-				+0.1
147,118	-				+2.9
147,118	-				+1.9
147,125	+				+0.7
147,130	+				-2.4
147,138	-				+1.5
147,138	-				-2.1
147,138	-				-1.0
147,139	+				-0.5
147,183	-				-0.7
147,184	+				-2.6
147,184	+				-0.8
147,187	-				+1.3
147,187	-				+0.1
147,187	-				+2.7
147,187	-				-0.6
147,187	-				-2.8
147,187	-				+0.7
147,188	+				+3.0
147,188	+				-1.8
147,188	+				-0.5
147,188	+				-2.2
147,202	-				+1.7
147,203	+				+2.8
147,203	+				-1.8
147,203	+				+1.9
147,203	+				-0.0
147,204	-				+3.9
147,204	-				-2.6
147,204	-				+4.6
147,204	-				-0.2
147,204	-				+0.7
147,204	-				+0.4
147,205	+				-1.0
147,205	+				-2.0
147,205	+				-1.3
147,205	+				-2.5
147,205	+				-2.1
147,206	-				+1.3
147,206	-				-1.8
147,206	-				-0.8
147,206	-				+2.7
147,207	+				+1.9
147,207	+				+2.3
147,207	+				-0.2
147,207	+				-0.8
147,227	+				+1.5
147,242	-				+6.1
147,248	-				-1.7
147,248	-				-3.2
147,248	-				-0.3
147,248	-				+2.4
147,248	-				-0.1
147,248	-				+2.9
147,249	+				+0.3
147,249	+				+1.9
147,249	+				-2.1
147,249	+				+3.1
147,249	+				+1.6
147,249	+				+1.3
147,252	-				+3.6
147,253	+				+2.1
147,262	-				-0.2
147,263	+				+1.9
147,267	-				-0.3
147,267	-				-1.4
147,267	-				+2.2
147,268	+				+2.2
147,268	+				-2.2
147,268	+				-2.2
147,268	+				+2.0
147,270	-				-1.1
147,270	-				-1.6
147,271	+				+0.9
147,273	-				+0.3
147,275	-				-0.6
147,294	-				+0.2
147,325	-				-0.5
147,325	-				-3.8
147,340	-				-2.5
147,341	+				-1.2
147,341	+				-1.5
147,342	-				-1.2
147,343	+				+1.0
147,361	-		MMJJ_RS00770	0.10	-3.0
147,362	+		MMJJ_RS00770	0.10	+1.9
147,447	-		MMJJ_RS00770	0.25	-0.7
147,448	+		MMJJ_RS00770	0.25	+1.4
147,494	+		MMJJ_RS00770	0.32	-1.1
147,496	+		MMJJ_RS00770	0.33	+0.4
147,498	-		MMJJ_RS00770	0.33	-2.7
147,498	-		MMJJ_RS00770	0.33	+1.1
147,499	+		MMJJ_RS00770	0.33	+1.2
147,499	+		MMJJ_RS00770	0.33	+0.4
147,520	+		MMJJ_RS00770	0.37	-2.5
147,548	+		MMJJ_RS00770	0.42	-2.6
147,550	+		MMJJ_RS00770	0.42	-4.0
147,554	+		MMJJ_RS00770	0.43	-0.5
147,554	+		MMJJ_RS00770	0.43	+1.1
147,567	-		MMJJ_RS00770	0.45	-1.0
147,567	-		MMJJ_RS00770	0.45	-2.4
147,568	+		MMJJ_RS00770	0.45	-2.9
147,574	-		MMJJ_RS00770	0.46	+1.8
147,575	+		MMJJ_RS00770	0.46	-0.2
147,578	-		MMJJ_RS00770	0.47	+3.1
147,578	-		MMJJ_RS00770	0.47	+1.0
147,579	+		MMJJ_RS00770	0.47	-1.0
147,579	+		MMJJ_RS00770	0.47	-1.1
147,579	+		MMJJ_RS00770	0.47	-1.8
147,579	+		MMJJ_RS00770	0.47	+2.1
147,590	-		MMJJ_RS00770	0.49	+3.1
147,590	-		MMJJ_RS00770	0.49	-0.2
147,590	-		MMJJ_RS00770	0.49	+0.0
147,608	+		MMJJ_RS00770	0.52	-0.8
147,608	+				+1.3
147,618	+		MMJJ_RS00770	0.53	+0.7
147,618	+		MMJJ_RS00770	0.53	-0.0
147,618	+		MMJJ_RS00770	0.53	-3.6
147,660	-		MMJJ_RS00770	0.61	-0.8
147,673	-		MMJJ_RS00770	0.63	+1.2
147,673	-		MMJJ_RS00770	0.63	-1.9
147,674	+		MMJJ_RS00770	0.63	-1.2
147,679	-		MMJJ_RS00770	0.64	+0.3
147,679	-		MMJJ_RS00770	0.64	+2.8
147,679	-		MMJJ_RS00770	0.64	+0.3
147,680	+		MMJJ_RS00770	0.64	+2.8
147,680	+		MMJJ_RS00770	0.64	-3.1
147,680	+		MMJJ_RS00770	0.64	-2.1
147,681	-		MMJJ_RS00770	0.64	+0.7
147,681	-		MMJJ_RS00770	0.64	+3.4
147,681	-		MMJJ_RS00770	0.64	-0.2
147,681	-		MMJJ_RS00770	0.64	+2.5
147,681	-		MMJJ_RS00770	0.64	-1.5
147,681	-		MMJJ_RS00770	0.64	-3.3
147,681	-		MMJJ_RS00770	0.64	+0.3
147,681	-		MMJJ_RS00770	0.64	+0.6
147,682	+		MMJJ_RS00770	0.64	+2.6
147,682	+		MMJJ_RS00770	0.64	+0.6
147,682	+		MMJJ_RS00770	0.64	+1.9
147,682	+		MMJJ_RS00770	0.64	-3.8
147,682	+		MMJJ_RS00770	0.64	-1.4
147,682	+		MMJJ_RS00770	0.64	-1.0
147,683	-		MMJJ_RS00770	0.64	-3.0
147,684	+		MMJJ_RS00770	0.65	+2.8
147,705	-		MMJJ_RS00770	0.68	-0.4
147,706	+		MMJJ_RS00770	0.68	+1.6
147,709	+		MMJJ_RS00770	0.69	+1.3
147,718	-		MMJJ_RS00770	0.70	+0.2
147,719	+		MMJJ_RS00770	0.71	-0.1
147,719	+		MMJJ_RS00770	0.71	+3.0
147,720	-		MMJJ_RS00770	0.71	-2.7
147,720	-		MMJJ_RS00770	0.71	+0.4
147,720	-		MMJJ_RS00770	0.71	+1.6
147,720	-		MMJJ_RS00770	0.71	-0.4
147,720	-		MMJJ_RS00770	0.71	-1.0
147,720	-		MMJJ_RS00770	0.71	+1.7
147,720	-		MMJJ_RS00770	0.71	+1.1
147,721	+		MMJJ_RS00770	0.71	+1.1
147,723	-		MMJJ_RS00770	0.71	-0.8
147,757	+		MMJJ_RS00770	0.77	+5.3
147,792	-		MMJJ_RS00770	0.83	+0.3
147,794	-		MMJJ_RS00770	0.83	-1.5
147,795	+		MMJJ_RS00770	0.83	+0.0
147,811	+		MMJJ_RS00770	0.86	+1.2
147,811	+		MMJJ_RS00770	0.86	+0.5
147,819	+		MMJJ_RS00770	0.87	+1.2
147,878	+				+2.8
147,880	-				+1.4
147,881	+				-3.4
147,882	-				-2.5
147,930	-				+0.3
147,933	-				-1.2
147,933	-				+2.1
147,933	-				-0.7
147,933	-				-2.6
147,933	-				+0.9
147,934	+				+1.5
147,941	-				+0.3
147,941	-				+3.3
147,941	-				+2.3
147,942	+				-1.8
147,942	+				+2.0
147,942	+				-2.4
147,959	+				+4.4
147,967	-				-0.2
147,968	+				+3.3
147,969	-				-3.5
147,969	-				-0.7
147,969	-				-2.5
147,994	-				+1.3
147,994	-				+1.7
147,995	+				-2.1
148,007	-		MMJJ_RS00775	0.10	+0.8
148,007	-		MMJJ_RS00775	0.10	-1.2
148,007	-				+0.3
148,008	+		MMJJ_RS00775	0.10	-0.3
148,008	+		MMJJ_RS00775	0.10	+1.6
148,009	-		MMJJ_RS00775	0.11	+0.3
148,009	-		MMJJ_RS00775	0.11	+2.9
148,009	-		MMJJ_RS00775	0.11	-1.1
148,009	-		MMJJ_RS00775	0.11	+4.6
148,009	-		MMJJ_RS00775	0.11	+0.5
148,009	-		MMJJ_RS00775	0.11	-1.1
148,009	-		MMJJ_RS00775	0.11	-2.1
148,010	+		MMJJ_RS00775	0.11	-2.0
148,010	+		MMJJ_RS00775	0.11	-1.7
148,010	+		MMJJ_RS00775	0.11	-0.7
148,017	-		MMJJ_RS00775	0.12	-3.1
148,017	-		MMJJ_RS00775	0.12	+0.3
148,021	-		MMJJ_RS00775	0.13	+1.1
148,021	-		MMJJ_RS00775	0.13	-0.2
148,021	-		MMJJ_RS00775	0.13	-2.1
148,021	-		MMJJ_RS00775	0.13	-2.9
148,021	-		MMJJ_RS00775	0.13	+0.3
148,021	-		MMJJ_RS00775	0.13	-1.8
148,021	-		MMJJ_RS00775	0.13	+2.2
148,022	+		MMJJ_RS00775	0.13	-0.2
148,022	+		MMJJ_RS00775	0.13	+0.2
148,022	+		MMJJ_RS00775	0.13	-1.9
148,026	+		MMJJ_RS00775	0.14	-2.3
148,026	+		MMJJ_RS00775	0.14	+0.2
148,038	+		MMJJ_RS00775	0.17	+0.1
148,070	+		MMJJ_RS00775	0.24	+1.1
148,070	+		MMJJ_RS00775	0.24	-0.7
148,115	+		MMJJ_RS00775	0.33	+4.9
148,126	+		MMJJ_RS00775	0.35	-2.9
148,180	+		MMJJ_RS00775	0.47	-2.6
148,197	+		MMJJ_RS00775	0.51	+0.3
148,197	+		MMJJ_RS00775	0.51	+0.4
148,198	-		MMJJ_RS00775	0.51	-0.7
148,198	-		MMJJ_RS00775	0.51	+0.4
148,236	+		MMJJ_RS00775	0.59	+0.4
148,287	-		MMJJ_RS00775	0.70	-0.5
148,288	+		MMJJ_RS00775	0.70	-0.6
148,338	-		MMJJ_RS00775	0.80	+0.7
148,338	-		MMJJ_RS00775	0.80	+0.2
148,353	-		MMJJ_RS00775	0.84	-1.4
148,353	-		MMJJ_RS00775	0.84	-3.3
148,354	+		MMJJ_RS00775	0.84	+0.5
148,354	+		MMJJ_RS00775	0.84	-3.5
148,380	-		MMJJ_RS00775	0.89	+1.3
148,380	-		MMJJ_RS00775	0.89	+2.6
148,395	-				-1.7
148,415	+				+1.3
148,415	+				+0.4
148,419	-				-2.2
148,419	-				-0.1
148,420	+				-2.9
148,427	-				+0.0
148,428	+				+2.7
148,470	-				-0.1
148,506	-				+1.0
148,519	+		MMJJ_RS00780	0.12	+0.2
148,537	-		MMJJ_RS00780	0.14	+3.8
148,565	-		MMJJ_RS00780	0.19	-0.6
148,565	-		MMJJ_RS00780	0.19	+1.8
148,565	-		MMJJ_RS00780	0.19	-1.5
148,565	-		MMJJ_RS00780	0.19	+0.0
148,572	-		MMJJ_RS00780	0.20	+1.5
148,607	+		MMJJ_RS00780	0.25	+1.0
148,689	-		MMJJ_RS00780	0.37	+3.8
148,693	-		MMJJ_RS00780	0.38	-0.7
148,698	-		MMJJ_RS00780	0.38	+2.1
148,700	-		MMJJ_RS00780	0.39	-1.4
148,700	-		MMJJ_RS00780	0.39	+1.5
148,700	-		MMJJ_RS00780	0.39	+0.8
148,700	-		MMJJ_RS00780	0.39	+2.1
148,701	+		MMJJ_RS00780	0.39	-2.8
148,701	+		MMJJ_RS00780	0.39	-2.2
148,796	+		MMJJ_RS00780	0.53	-1.2
148,796	+		MMJJ_RS00780	0.53	+2.4
148,835	-		MMJJ_RS00780	0.59	-2.4
148,855	-		MMJJ_RS00780	0.62	+0.1
148,856	+		MMJJ_RS00780	0.62	-1.1
148,856	+		MMJJ_RS00780	0.62	-0.3
148,866	-		MMJJ_RS00780	0.64	-3.2
148,866	-		MMJJ_RS00780	0.64	-2.8
148,867	+		MMJJ_RS00780	0.64	-3.3
148,868	-		MMJJ_RS00780	0.64	-1.6
148,869	+		MMJJ_RS00780	0.64	+5.1
148,883	-		MMJJ_RS00780	0.66	+0.4
148,986	-		MMJJ_RS00780	0.81	+1.8
148,986	-		MMJJ_RS00780	0.81	+3.8
148,995	-		MMJJ_RS00780	0.83	-1.0
149,000	-		MMJJ_RS00780	0.84	+1.9
149,001	+		MMJJ_RS00780	0.84	+2.7
149,032	-		MMJJ_RS00780	0.88	-0.6
149,063	-				-2.2
149,063	-				-0.7
149,105	+				-2.2
149,171	-		MMJJ_RS00785	0.17	-2.9
149,290	-		MMJJ_RS00785	0.79	-0.9
149,291	+		MMJJ_RS00785	0.80	-0.2
149,352	+				+1.7
149,356	-				+3.4
149,395	+				-0.0
149,399	-				+0.7
149,400	+				-2.4
149,412	+				+1.1
149,418	+				-2.1
149,426	-				+1.7
149,426	-				+1.3
149,426	-				-0.5
149,426	-				+2.8
149,427	+				+1.3
149,427	+				-0.3
149,428	-				-0.5
149,428	-				+1.8
149,429	+				+4.5
149,429	+				+3.5
149,429	+				+3.4