Strain Fitness in Pantoea sp. MT58 around IAI47_19425

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
112,338	+		IAI47_19420	0.11	+1.3
112,338	+		IAI47_19420	0.11	+0.2
112,338	+		IAI47_19420	0.11	+3.5
112,340	+		IAI47_19420	0.12	+1.7
112,340	+		IAI47_19420	0.12	+0.9
112,341	-		IAI47_19420	0.12	-1.1
112,393	+		IAI47_19420	0.18	-0.9
112,449	-		IAI47_19420	0.24	+0.9
112,479	-		IAI47_19420	0.27	-1.3
112,514	+		IAI47_19420	0.31	+0.5
112,514	+		IAI47_19420	0.31	+0.8
112,514	+		IAI47_19420	0.31	+1.0
112,514	+		IAI47_19420	0.31	+1.2
112,514	+		IAI47_19420	0.31	+0.3
112,514	+		IAI47_19420	0.31	+0.7
112,515	-		IAI47_19420	0.31	+1.7
112,515	-		IAI47_19420	0.31	-1.4
112,515	-		IAI47_19420	0.31	+1.4
112,515	-		IAI47_19420	0.31	+0.5
112,515	-		IAI47_19420	0.31	+0.7
112,590	+		IAI47_19420	0.40	-1.0
112,590	+		IAI47_19420	0.40	+0.3
112,590	+		IAI47_19420	0.40	+1.9
112,591	-		IAI47_19420	0.40	-0.5
112,619	+		IAI47_19420	0.43	-0.6
112,620	-		IAI47_19420	0.43	-0.1
112,677	-		IAI47_19420	0.49	+2.1
112,688	+		IAI47_19420	0.51	-0.7
112,688	+		IAI47_19420	0.51	+0.9
112,688	+		IAI47_19420	0.51	+3.8
112,689	-		IAI47_19420	0.51	+0.5
112,713	+		IAI47_19420	0.54	+2.8
112,713	+		IAI47_19420	0.54	-0.1
112,729	+		IAI47_19420	0.55	+0.7
112,729	+		IAI47_19420	0.55	+0.4
112,730	-		IAI47_19420	0.55	+0.1
112,736	+		IAI47_19420	0.56	-0.5
112,773	-		IAI47_19420	0.60	+1.4
112,910	+		IAI47_19420	0.76	-0.9
112,948	+		IAI47_19420	0.80	+0.4
112,948	+		IAI47_19420	0.80	+0.7
112,948	+		IAI47_19420	0.80	-1.3
112,948	+		IAI47_19420	0.80	+0.0
112,949	-		IAI47_19420	0.80	+0.0
112,949	-		IAI47_19420	0.80	-0.8
112,949	-		IAI47_19420	0.80	+0.0
113,006	+		IAI47_19420	0.86	+1.2
113,006	+		IAI47_19420	0.86	-0.3
113,006	+		IAI47_19420	0.86	+2.4
113,007	-		IAI47_19420	0.87	+1.3
113,026	+		IAI47_19420	0.89	-0.4
113,027	-		IAI47_19420	0.89	-0.6
113,027	-		IAI47_19420	0.89	-0.3
113,072	+				-0.9
113,073	-				-1.0
113,083	+				+0.7
113,083	+				+0.1
113,083	+				-1.6
113,083	+				+0.3
113,083	+				-0.1
113,084	-				+0.4
113,084	-				-1.9
113,134	+				+1.7
113,135	-				-0.3
113,135	-				+2.2
113,188	+				+1.5
113,189	-				-0.4
113,254	+				-0.3
113,254	-				-0.3
113,255	-				+1.9
113,260	+				-1.4
113,260	+				-0.0
113,261	-				+0.9
113,261	-				+2.7
113,261	-				-2.1
113,355	-				-1.2
113,355	-				-0.1
113,355	-				+1.8
113,355	-				-0.8
113,394	+				-1.8
113,458	-				-1.1
113,467	+				-0.3
113,467	+				+2.4
113,468	-				+0.6
113,468	-				+1.7
113,471	+				+0.4
113,471	+				-1.0
113,471	+				+0.2
113,472	-				-1.4
113,472	-				-1.4
113,554	+		IAI47_19425	0.11	+1.7
113,554	+		IAI47_19425	0.11	+2.7
113,561	+		IAI47_19425	0.12	-0.9
113,561	+		IAI47_19425	0.12	+0.7
113,561	+		IAI47_19425	0.12	+1.2
113,562	-		IAI47_19425	0.12	-0.5
113,562	-		IAI47_19425	0.12	+0.3
113,562	-		IAI47_19425	0.12	-1.1
113,562	-		IAI47_19425	0.12	+1.3
113,562	-		IAI47_19425	0.12	-1.1
113,562	-		IAI47_19425	0.12	-1.0
113,608	+		IAI47_19425	0.14	+1.0
113,608	+		IAI47_19425	0.14	+2.3
113,608	+		IAI47_19425	0.14	-0.6
113,608	+		IAI47_19425	0.14	+2.1
113,609	-		IAI47_19425	0.14	-0.1
113,612	-		IAI47_19425	0.14	+3.7
113,629	+		IAI47_19425	0.15	+1.4
113,629	+		IAI47_19425	0.15	-1.1
113,629	+		IAI47_19425	0.15	-0.1
113,630	-		IAI47_19425	0.15	-0.6
113,630	-		IAI47_19425	0.15	-0.0
113,630	-		IAI47_19425	0.15	+0.9
113,630	-		IAI47_19425	0.15	-1.6
113,630	-		IAI47_19425	0.15	-1.6
113,633	+		IAI47_19425	0.15	+0.5
113,633	+		IAI47_19425	0.15	-0.7
113,633	+		IAI47_19425	0.15	+1.9
113,633	+		IAI47_19425	0.15	-0.3
113,633	+		IAI47_19425	0.15	-0.7
113,633	+		IAI47_19425	0.15	+1.1
113,633	+		IAI47_19425	0.15	-0.7
113,633	+		IAI47_19425	0.15	-0.2
113,633	+		IAI47_19425	0.15	+2.1
113,633	+		IAI47_19425	0.15	+0.3
113,633	+		IAI47_19425	0.15	+1.2
113,633	+		IAI47_19425	0.15	-0.3
113,634	-		IAI47_19425	0.15	-0.3
113,634	-		IAI47_19425	0.15	+0.4
113,634	-		IAI47_19425	0.15	+0.1
113,634	-		IAI47_19425	0.15	+0.6
113,634	-		IAI47_19425	0.15	+0.2
113,675	+		IAI47_19425	0.17	+0.3
113,675	+		IAI47_19425	0.17	-0.5
113,675	+		IAI47_19425	0.17	-1.4
113,695	+		IAI47_19425	0.18	+1.6
113,695	+		IAI47_19425	0.18	-0.7
113,695	+		IAI47_19425	0.18	+1.2
113,696	-		IAI47_19425	0.18	+1.3
113,750	-		IAI47_19425	0.21	-0.9
113,875	-		IAI47_19425	0.27	+1.5
113,875	-		IAI47_19425	0.27	-0.4
113,875	-		IAI47_19425	0.27	-1.0
113,875	-		IAI47_19425	0.27	+0.6
114,060	+		IAI47_19425	0.37	+0.7
114,061	-		IAI47_19425	0.37	+2.6
114,061	-		IAI47_19425	0.37	-0.3
114,096	-		IAI47_19425	0.39	-0.8
114,169	+		IAI47_19425	0.42	+0.9
114,184	+		IAI47_19425	0.43	-1.4
114,198	-		IAI47_19425	0.44	+0.1
114,198	-		IAI47_19425	0.44	-0.5
114,211	+		IAI47_19425	0.44	+1.6
114,293	+		IAI47_19425	0.49	+0.2
114,293	+		IAI47_19425	0.49	-0.1
114,293	+		IAI47_19425	0.49	+0.6
114,293	+		IAI47_19425	0.49	-0.8
114,293	+		IAI47_19425	0.49	+1.0
114,293	+		IAI47_19425	0.49	+1.1
114,294	-		IAI47_19425	0.49	+0.6
114,294	-		IAI47_19425	0.49	+1.3
114,294	-		IAI47_19425	0.49	-0.7
114,294	-		IAI47_19425	0.49	-1.4
114,294	-		IAI47_19425	0.49	-0.0
114,294	-		IAI47_19425	0.49	-0.5
114,294	-		IAI47_19425	0.49	+1.3
114,294	-		IAI47_19425	0.49	+0.2
114,296	-		IAI47_19425	0.49	-0.5
114,350	+		IAI47_19425	0.52	-0.8
114,350	+		IAI47_19425	0.52	+1.4
114,350	+		IAI47_19425	0.52	-2.2
114,350	+		IAI47_19425	0.52	+1.1
114,352	+		IAI47_19425	0.52	+2.2
114,353	-		IAI47_19425	0.52	+0.3
114,353	-		IAI47_19425	0.52	-1.5
114,353	-		IAI47_19425	0.52	+1.4
114,353	-		IAI47_19425	0.52	+0.7
114,353	-		IAI47_19425	0.52	+0.3
114,353	-		IAI47_19425	0.52	-0.8
114,355	+		IAI47_19425	0.52	+1.2
114,355	+		IAI47_19425	0.52	+1.1
114,355	+		IAI47_19425	0.52	+2.3
114,355	+		IAI47_19425	0.52	+0.5
114,356	-		IAI47_19425	0.52	+1.0
114,356	-		IAI47_19425	0.52	+0.7
114,356	-		IAI47_19425	0.52	-0.0
114,356	-		IAI47_19425	0.52	+0.8
114,430	+		IAI47_19425	0.56	+1.4
114,430	+		IAI47_19425	0.56	+0.0
114,490	+		IAI47_19425	0.59	+0.7
114,490	+		IAI47_19425	0.59	-0.6
114,490	+		IAI47_19425	0.59	-0.8
114,579	+		IAI47_19425	0.63	+0.7
114,579	+		IAI47_19425	0.63	+0.6
114,579	+		IAI47_19425	0.63	+0.0
114,579	+		IAI47_19425	0.63	-0.2
114,579	+		IAI47_19425	0.63	+1.1
114,579	+		IAI47_19425	0.63	-0.5
114,580	-		IAI47_19425	0.63	-0.3
114,580	-		IAI47_19425	0.63	-0.1
114,580	-		IAI47_19425	0.63	-1.0
114,580	-		IAI47_19425	0.63	-0.4
114,591	-		IAI47_19425	0.64	+0.1
114,672	-		IAI47_19425	0.68	-0.4
114,672	-		IAI47_19425	0.68	-1.1
114,678	+		IAI47_19425	0.68	+0.2
114,717	-		IAI47_19425	0.70	+0.0
114,736	+		IAI47_19425	0.71	+0.1
114,736	+		IAI47_19425	0.71	+0.1
114,736	+		IAI47_19425	0.71	+2.3
114,752	+		IAI47_19425	0.72	+0.8
114,752	+		IAI47_19425	0.72	+0.9
114,776	-		IAI47_19425	0.73	+0.1
114,776	-		IAI47_19425	0.73	+1.0
114,776	-		IAI47_19425	0.73	+0.2
114,811	+		IAI47_19425	0.75	-1.6
114,812	-		IAI47_19425	0.75	+0.8
114,887	+		IAI47_19425	0.79	+0.6
114,887	+		IAI47_19425	0.79	+2.3
114,887	+		IAI47_19425	0.79	+0.6
114,888	-		IAI47_19425	0.79	+1.6
114,888	-		IAI47_19425	0.79	-1.3
114,888	-		IAI47_19425	0.79	+3.0
114,914	+		IAI47_19425	0.80	+0.6
114,914	+		IAI47_19425	0.80	-1.1
114,914	+		IAI47_19425	0.80	+0.1
114,914	+		IAI47_19425	0.80	+2.5
114,914	+		IAI47_19425	0.80	+1.3
114,914	+		IAI47_19425	0.80	+2.1
114,914	+		IAI47_19425	0.80	+0.6
114,914	+		IAI47_19425	0.80	-1.3
114,915	-		IAI47_19425	0.80	+0.6
114,915	-		IAI47_19425	0.80	+0.3
114,915	-		IAI47_19425	0.80	+0.5
114,915	-		IAI47_19425	0.80	+1.0
114,915	-		IAI47_19425	0.80	+1.4
114,915	-		IAI47_19425	0.80	+1.5
114,915	-		IAI47_19425	0.80	+0.5
114,926	+		IAI47_19425	0.81	-1.6
114,926	+		IAI47_19425	0.81	+0.2
114,926	+		IAI47_19425	0.81	+1.9
114,926	+		IAI47_19425	0.81	-0.1
114,926	+		IAI47_19425	0.81	-0.8
114,946	+		IAI47_19425	0.82	+2.7
114,946	+		IAI47_19425	0.82	+1.4
114,946	+		IAI47_19425	0.82	+1.7
114,946	+		IAI47_19425	0.82	+1.5
114,946	+		IAI47_19425	0.82	-1.2
114,946	+		IAI47_19425	0.82	-1.3
114,947	-		IAI47_19425	0.82	-1.7
114,947	-		IAI47_19425	0.82	-1.9
114,947	-		IAI47_19425	0.82	-0.7
114,967	+		IAI47_19425	0.83	-0.3
114,967	+		IAI47_19425	0.83	+0.2
114,967	+		IAI47_19425	0.83	+0.0
114,967	+		IAI47_19425	0.83	-0.7
114,967	+		IAI47_19425	0.83	+0.9
114,967	+		IAI47_19425	0.83	-0.9
114,967	+		IAI47_19425	0.83	+1.6
114,968	-		IAI47_19425	0.83	-0.9
114,968	-		IAI47_19425	0.83	+1.7
114,968	-		IAI47_19425	0.83	-0.5
114,968	-		IAI47_19425	0.83	-0.7
114,968	-		IAI47_19425	0.83	+2.5
114,973	+		IAI47_19425	0.83	-0.3
114,973	+		IAI47_19425	0.83	+1.7
114,973	+		IAI47_19425	0.83	+1.2
114,973	+		IAI47_19425	0.83	+2.3
114,974	-		IAI47_19425	0.83	+3.2
115,036	+		IAI47_19425	0.86	+0.6
115,037	-		IAI47_19425	0.86	+0.7
115,047	+		IAI47_19425	0.87	+0.1
115,073	+		IAI47_19425	0.88	+0.0
115,073	+		IAI47_19425	0.88	+1.6
115,073	+		IAI47_19425	0.88	+3.7
115,073	+		IAI47_19425	0.88	-0.0
115,073	+		IAI47_19425	0.88	-0.1
115,073	+		IAI47_19425	0.88	+0.1
115,073	+		IAI47_19425	0.88	+1.7
115,074	-		IAI47_19425	0.88	+0.1
115,074	-		IAI47_19425	0.88	-0.9
115,074	-		IAI47_19425	0.88	-1.2
115,074	-		IAI47_19425	0.88	+0.2
115,074	-		IAI47_19425	0.88	-1.5
115,074	-		IAI47_19425	0.88	-1.3
115,074	-		IAI47_19425	0.88	+1.1
115,074	-		IAI47_19425	0.88	+0.9
115,141	+				+0.5
115,168	+				-1.0
115,168	+				-0.7
115,169	-				+1.3
115,169	-				+0.1
115,180	+				+0.3
115,181	-				+2.2
115,291	+				+1.8
115,291	+				+0.6
115,292	-				-0.5
115,305	-				-0.1
115,350	+				+0.6
115,350	+				+0.7
115,350	+				+1.1
115,351	-				-1.2
115,351	-				+0.9
115,351	-				-0.1
115,413	+				-0.3
115,413	+				-0.4
115,484	+				+0.1
115,497	+		IAI47_19430	0.11	+1.6
115,532	-		IAI47_19430	0.19	-0.0
115,532	-		IAI47_19430	0.19	-0.2
115,743	+		IAI47_19430	0.63	+0.2
115,743	+		IAI47_19430	0.63	+0.8
115,744	-		IAI47_19430	0.64	+1.6
115,744	-		IAI47_19430	0.64	-0.5
115,816	+		IAI47_19430	0.79	+0.9
115,817	-		IAI47_19430	0.79	-0.2
115,855	+		IAI47_19430	0.87	+0.0
115,855	+		IAI47_19430	0.87	-1.5
115,891	-				-0.7
115,891	-				+1.7
115,891	-				-0.9
115,891	-				+2.5
115,912	+				-1.1
115,912	+				+2.2
115,992	+				+0.1
115,992	+				+0.2
115,992	+				+0.6
115,992	+				-1.8
115,992	+				+1.7
115,992	+				+1.1
115,993	-				-0.7
115,993	-				-0.6
115,993	-				+2.2
115,993	-				+0.4
115,994	+				+0.3
115,994	+				+0.1
115,994	+				-1.3
115,994	+				+0.6
115,995	-				+0.9
115,995	-				+1.1
115,995	-				-0.3
115,995	-				+1.1
116,047	+				-1.9
116,047	+				-1.7
116,047	+				+0.3
116,052	-				-1.1
116,052	-				-0.2
116,052	-				-2.0
116,096	+				+1.0
116,096	+				+0.2
116,098	+				-0.1
116,098	+				-0.5
116,099	-				+0.3
116,155	-		IAI47_19435	0.16	-0.5
116,281	+		IAI47_19435	0.30	-0.4