Strain Fitness in Pantoea sp. MT58 around IAI47_19410

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
107,527	+				+1.5
107,527	+				+1.8
107,528	-				+0.9
107,528	-				-0.5
107,531	-				-0.9
107,547	+				-0.5
107,547	+				-0.5
107,548	-				+0.9
107,584	+				+0.9
107,584	+				+0.3
107,584	+				-0.1
107,585	-				+0.2
107,617	+				+0.7
107,630	-				+1.1
107,630	-				-1.3
107,633	+				+1.3
107,633	+				-0.2
107,633	+				+0.1
107,633	+				+0.9
107,633	+				+0.4
107,633	+				-1.0
107,633	+				+3.1
107,633	+				-1.2
107,633	+				+0.7
107,633	+				+1.2
107,633	+				-0.1
107,633	+				+0.1
107,634	-				-1.7
107,634	-				+0.1
107,634	-				+1.1
107,634	-				-1.5
107,634	-				-0.1
107,634	-				+2.7
107,634	-				+0.1
107,691	-		IAI47_19405	0.15	-0.9
107,691	-		IAI47_19405	0.15	-0.7
107,718	+		IAI47_19405	0.18	+3.6
107,718	+		IAI47_19405	0.18	+0.0
107,718	+		IAI47_19405	0.18	+0.9
107,718	+		IAI47_19405	0.18	+1.4
107,718	+		IAI47_19405	0.18	-0.0
107,718	+		IAI47_19405	0.18	-0.2
107,718	+		IAI47_19405	0.18	+2.3
107,718	+		IAI47_19405	0.18	+1.5
107,719	-		IAI47_19405	0.18	-0.1
107,719	-		IAI47_19405	0.18	+0.1
107,719	-		IAI47_19405	0.18	+1.6
107,783	+		IAI47_19405	0.24	+1.3
107,784	-		IAI47_19405	0.24	+1.7
107,813	-		IAI47_19405	0.27	+0.2
107,813	-		IAI47_19405	0.27	+1.4
107,813	-		IAI47_19405	0.27	-0.7
107,852	+		IAI47_19405	0.31	+0.5
107,852	+		IAI47_19405	0.31	-0.0
107,852	+		IAI47_19405	0.31	+0.1
107,873	-		IAI47_19405	0.34	-0.1
107,937	+		IAI47_19405	0.40	+1.1
107,937	+		IAI47_19405	0.40	-0.2
107,937	+		IAI47_19405	0.40	-1.0
107,968	+		IAI47_19405	0.43	+0.5
107,969	-		IAI47_19405	0.43	-0.3
108,062	+		IAI47_19405	0.53	-0.4
108,077	+		IAI47_19405	0.54	+0.1
108,077	+		IAI47_19405	0.54	+1.7
108,077	+		IAI47_19405	0.54	+1.1
108,077	+		IAI47_19405	0.54	+0.2
108,077	+		IAI47_19405	0.54	-0.7
108,077	+		IAI47_19405	0.54	+0.1
108,078	-		IAI47_19405	0.54	-1.1
108,078	-		IAI47_19405	0.54	+0.1
108,078	-		IAI47_19405	0.54	-0.4
108,078	-		IAI47_19405	0.54	-0.8
108,323	+		IAI47_19405	0.79	-0.3
108,323	+		IAI47_19405	0.79	+0.1
108,323	+		IAI47_19405	0.79	+0.3
108,323	+		IAI47_19405	0.79	+1.1
108,323	+		IAI47_19405	0.79	+0.5
108,323	+		IAI47_19405	0.79	+2.7
108,323	+		IAI47_19405	0.79	+0.8
108,323	+		IAI47_19405	0.79	-1.6
108,323	+		IAI47_19405	0.79	+1.6
108,324	-		IAI47_19405	0.79	-0.2
108,324	-		IAI47_19405	0.79	+1.1
108,324	-		IAI47_19405	0.79	-0.3
108,324	-		IAI47_19405	0.79	+0.4
108,324	-		IAI47_19405	0.79	+1.2
108,324	-		IAI47_19405	0.79	+0.1
108,324	-		IAI47_19405	0.79	-0.8
108,325	+		IAI47_19405	0.79	-1.0
108,331	+		IAI47_19405	0.80	+0.9
108,332	-		IAI47_19405	0.80	+1.1
108,487	+				+0.5
108,488	-				+1.0
108,556	-				-0.6
108,561	+				-0.8
108,561	+				+0.8
108,561	+				-0.5
108,561	+				+0.1
108,561	+				+1.0
108,561	+				+0.5
108,562	-				+1.1
108,562	-				+2.3
108,562	-				+4.8
108,608	+				+1.7
108,608	+				-0.1
108,609	-				+0.2
108,648	+		IAI47_19410	0.12	+1.7
108,677	+		IAI47_19410	0.15	+0.6
108,678	-		IAI47_19410	0.15	+0.0
108,678	-		IAI47_19410	0.15	+0.7
108,678	-		IAI47_19410	0.15	+0.5
108,680	+		IAI47_19410	0.15	-0.4
108,680	+		IAI47_19410	0.15	-0.1
108,680	+		IAI47_19410	0.15	+2.0
108,680	+		IAI47_19410	0.15	+0.7
108,680	+		IAI47_19410	0.15	+0.1
108,681	-		IAI47_19410	0.15	+0.5
108,681	-		IAI47_19410	0.15	+0.8
108,681	-		IAI47_19410	0.15	+1.6
108,681	-		IAI47_19410	0.15	+1.1
108,699	+		IAI47_19410	0.17	+0.7
108,715	+		IAI47_19410	0.18	+0.8
108,715	+		IAI47_19410	0.18	-0.8
108,716	-		IAI47_19410	0.18	-0.5
108,769	+		IAI47_19410	0.23	+2.1
108,770	-		IAI47_19410	0.23	+1.1
108,770	-		IAI47_19410	0.23	+1.3
108,770	-		IAI47_19410	0.23	+2.0
108,866	-		IAI47_19410	0.32	-1.9
108,873	+		IAI47_19410	0.33	-1.7
108,873	+		IAI47_19410	0.33	+0.1
108,874	-		IAI47_19410	0.33	+2.3
108,948	-		IAI47_19410	0.40	+0.1
109,111	-		IAI47_19410	0.54	-0.5
109,111	-		IAI47_19410	0.54	-0.7
109,120	+		IAI47_19410	0.55	+0.3
109,120	+		IAI47_19410	0.55	+2.6
109,151	+		IAI47_19410	0.58	+0.9
109,152	-		IAI47_19410	0.58	-0.5
109,152	-		IAI47_19410	0.58	+0.5
109,163	+		IAI47_19410	0.59	-0.7
109,163	+		IAI47_19410	0.59	+0.0
109,163	+		IAI47_19410	0.59	+2.4
109,164	-		IAI47_19410	0.59	-0.7
109,190	+		IAI47_19410	0.62	+2.1
109,257	-		IAI47_19410	0.68	+1.9
109,373	-		IAI47_19410	0.78	-2.4
109,373	-		IAI47_19410	0.78	-0.7
109,426	-		IAI47_19410	0.83	+0.5
109,426	-		IAI47_19410	0.83	+0.3
109,456	+		IAI47_19410	0.86	+0.3
109,457	-		IAI47_19410	0.86	-1.2
109,457	-		IAI47_19410	0.86	+1.4
109,526	-				+1.0
109,526	-				+0.1
109,526	-				-0.1
109,549	+				-0.6
109,550	-				-1.6
109,564	+				+1.7
109,568	-				+1.3
109,589	+				+0.0
109,665	+				+0.6
109,723	+				-1.2
109,723	+				-1.1
109,723	+				-1.4
109,723	+				+2.7
109,723	+				-1.3
109,723	+				-0.1
109,724	-				+0.8
109,724	-				-1.3
109,724	-				-0.2
109,724	-				+1.1
109,724	-				-1.1
109,726	+				-0.5
109,727	-				+0.3
109,727	-				+1.9
109,746	-				-0.3
109,748	+				+1.3
109,748	+				-0.1
109,748	+				+0.8
109,748	+				+0.6
109,749	-				+1.1
109,749	-				-0.2
109,749	-				-0.2
109,749	-				+0.9
109,749	-				+1.3
109,822	+				+0.9
109,823	-				+1.2
109,823	-				+0.3
109,823	-				-0.0
109,823	-				+1.8
109,873	+		IAI47_19415	0.11	-0.4
109,873	+		IAI47_19415	0.11	+1.7
109,873	+		IAI47_19415	0.11	+0.6
109,940	-		IAI47_19415	0.14	-0.1
109,940	-		IAI47_19415	0.14	+0.5
109,997	+		IAI47_19415	0.17	+1.3
110,029	+		IAI47_19415	0.18	-0.3
110,029	+		IAI47_19415	0.18	-0.2
110,029	+		IAI47_19415	0.18	+3.1
110,029	+		IAI47_19415	0.18	+0.8
110,029	+		IAI47_19415	0.18	+0.3
110,029	+		IAI47_19415	0.18	+1.3
110,029	+		IAI47_19415	0.18	+1.0
110,029	+		IAI47_19415	0.18	+1.6
110,029	+		IAI47_19415	0.18	-0.4
110,030	-		IAI47_19415	0.18	+0.3
110,030	-		IAI47_19415	0.18	+0.7
110,030	-		IAI47_19415	0.18	+0.2
110,030	-		IAI47_19415	0.18	+1.6
110,030	-		IAI47_19415	0.18	+1.0
110,030	-		IAI47_19415	0.18	-0.5
110,035	+		IAI47_19415	0.18	+2.7
110,035	+		IAI47_19415	0.18	-0.2
110,035	+		IAI47_19415	0.18	+0.4
110,035	+		IAI47_19415	0.18	-0.4
110,035	+		IAI47_19415	0.18	+0.1
110,035	+		IAI47_19415	0.18	-0.4
110,035	+		IAI47_19415	0.18	-0.4
110,036	-		IAI47_19415	0.18	+1.1
110,036	-		IAI47_19415	0.18	+0.2
110,036	-		IAI47_19415	0.18	-1.7
110,108	+		IAI47_19415	0.22	-0.4
110,109	-		IAI47_19415	0.22	+0.1
110,109	-		IAI47_19415	0.22	+0.3
110,109	-		IAI47_19415	0.22	-0.4
110,133	-		IAI47_19415	0.23	+0.7
110,133	-		IAI47_19415	0.23	+0.9
110,135	+		IAI47_19415	0.23	-0.1
110,136	-		IAI47_19415	0.23	-1.9
110,136	-		IAI47_19415	0.23	+1.1
110,136	-		IAI47_19415	0.23	+0.6
110,136	-		IAI47_19415	0.23	-1.2
110,308	+		IAI47_19415	0.31	-0.4
110,308	+		IAI47_19415	0.31	+0.2
110,308	+		IAI47_19415	0.31	-2.4
110,309	-		IAI47_19415	0.31	+2.9
110,309	-		IAI47_19415	0.31	+1.9
110,328	-		IAI47_19415	0.32	+2.3
110,335	+		IAI47_19415	0.33	-0.1
110,335	+		IAI47_19415	0.33	-0.6
110,336	-		IAI47_19415	0.33	-0.1
110,336	-		IAI47_19415	0.33	-2.0
110,336	-		IAI47_19415	0.33	+1.5
110,363	+		IAI47_19415	0.34	-0.7
110,363	+		IAI47_19415	0.34	+2.1
110,363	+		IAI47_19415	0.34	+0.8
110,363	+		IAI47_19415	0.34	+0.1
110,364	-		IAI47_19415	0.34	+1.2
110,364	-		IAI47_19415	0.34	-1.2
110,364	-		IAI47_19415	0.34	+0.5
110,425	+		IAI47_19415	0.37	+2.8
110,425	+		IAI47_19415	0.37	-1.6
110,426	-		IAI47_19415	0.37	+1.0
110,426	-		IAI47_19415	0.37	-0.2
110,486	+		IAI47_19415	0.40	+0.4
110,486	+		IAI47_19415	0.40	+0.9
110,491	+		IAI47_19415	0.40	-1.0
110,492	-				-0.3
110,492	-		IAI47_19415	0.40	+0.2
110,505	-		IAI47_19415	0.41	+0.3
110,522	+		IAI47_19415	0.41	+0.1
110,523	-		IAI47_19415	0.41	+0.0
110,526	-		IAI47_19415	0.42	-0.1
110,578	+		IAI47_19415	0.44	-1.2
110,578	+		IAI47_19415	0.44	-0.7
110,578	+		IAI47_19415	0.44	+0.7
110,578	+		IAI47_19415	0.44	+0.2
110,578	+		IAI47_19415	0.44	-2.6
110,579	-		IAI47_19415	0.44	+0.1
110,579	-		IAI47_19415	0.44	+2.0
110,593	+		IAI47_19415	0.45	-0.2
110,594	-		IAI47_19415	0.45	+0.7
110,594	-		IAI47_19415	0.45	+1.4