Strain Fitness in Pantoea sp. MT58 around IAI47_17145

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,631,610	+		IAI47_17135	0.73	+0.8
3,631,662	+		IAI47_17135	0.83	-0.4
3,631,663	-		IAI47_17135	0.83	-0.1
3,631,663	-		IAI47_17135	0.83	+0.1
3,631,709	+				-2.3
3,631,709	+				-2.3
3,631,709	+				-1.5
3,631,709	+				+0.3
3,631,709	+				+0.4
3,631,710	-				-1.5
3,631,716	-				-0.8
3,631,716	-				-0.5
3,631,822	+				-2.7
3,631,822	+				-1.0
3,631,822	+				+0.6
3,631,822	+				+1.6
3,631,822	+				-0.4
3,631,822	+				-0.1
3,631,822	+				+0.4
3,631,822	+				-0.5
3,631,822	+				-0.6
3,631,822	+				+0.2
3,631,822	+				-1.6
3,631,822	+				+0.7
3,631,822	+				+0.7
3,631,823	-				-0.9
3,631,823	-				+2.3
3,631,823	-				-0.3
3,631,823	-				-0.0
3,631,823	-				+0.1
3,631,823	-				-1.2
3,631,823	-				-0.5
3,631,823	-				-0.5
3,631,823	-				-0.2
3,631,823	-				+1.5
3,631,823	-				+0.7
3,631,823	-				-1.9
3,631,823	-				-0.5
3,631,823	-				-0.7
3,631,825	+				+0.6
3,631,825	+				-0.7
3,631,825	+				-0.6
3,631,825	+				+0.9
3,631,825	+				-1.0
3,631,825	+				-0.9
3,631,825	+				-1.1
3,631,825	+				-0.3
3,631,826	-				-0.4
3,631,826	-				+1.4
3,631,826	-				+1.3
3,631,877	+		IAI47_17140	0.15	-0.1
3,631,877	+		IAI47_17140	0.15	-1.5
3,631,885	-		IAI47_17140	0.16	+0.2
3,631,885	-		IAI47_17140	0.16	+1.3
3,631,885	-		IAI47_17140	0.16	+1.6
3,631,941	+		IAI47_17140	0.23	-0.6
3,631,941	+		IAI47_17140	0.23	-2.1
3,631,942	-		IAI47_17140	0.23	+0.6
3,631,942	-		IAI47_17140	0.23	-0.3
3,631,942	-		IAI47_17140	0.23	-1.4
3,631,977	+		IAI47_17140	0.28	+2.5
3,631,977	+		IAI47_17140	0.28	-2.2
3,631,977	+		IAI47_17140	0.28	+2.1
3,631,978	-		IAI47_17140	0.28	-0.5
3,631,978	-		IAI47_17140	0.28	+1.0
3,631,978	-		IAI47_17140	0.28	+0.6
3,631,978	-		IAI47_17140	0.28	-0.8
3,632,043	+		IAI47_17140	0.36	+0.4
3,632,044	-		IAI47_17140	0.36	+0.2
3,632,044	-		IAI47_17140	0.36	+0.7
3,632,085	+		IAI47_17140	0.42	+1.4
3,632,085	+		IAI47_17140	0.42	-1.8
3,632,086	-		IAI47_17140	0.42	+1.5
3,632,114	-		IAI47_17140	0.45	+0.4
3,632,148	+		IAI47_17140	0.50	-1.6
3,632,232	+		IAI47_17140	0.60	+2.3
3,632,278	-		IAI47_17140	0.66	-0.4
3,632,300	+		IAI47_17140	0.69	+1.2
3,632,300	+		IAI47_17140	0.69	+0.0
3,632,300	+		IAI47_17140	0.69	-1.3
3,632,300	+		IAI47_17140	0.69	+0.0
3,632,300	+		IAI47_17140	0.69	+1.1
3,632,300	+		IAI47_17140	0.69	-0.1
3,632,300	+		IAI47_17140	0.69	-1.3
3,632,300	+		IAI47_17140	0.69	+1.0
3,632,300	+		IAI47_17140	0.69	+2.0
3,632,300	+		IAI47_17140	0.69	+0.8
3,632,300	+		IAI47_17140	0.69	+0.4
3,632,300	+		IAI47_17140	0.69	+0.8
3,632,300	+		IAI47_17140	0.69	+0.9
3,632,301	-		IAI47_17140	0.69	+1.0
3,632,301	-		IAI47_17140	0.69	-1.9
3,632,301	-		IAI47_17140	0.69	+2.4
3,632,301	-		IAI47_17140	0.69	+2.2
3,632,301	-		IAI47_17140	0.69	-0.2
3,632,301	-		IAI47_17140	0.69	+1.5
3,632,301	-		IAI47_17140	0.69	-1.2
3,632,301	-		IAI47_17140	0.69	-0.5
3,632,301	-		IAI47_17140	0.69	-0.0
3,632,301	-		IAI47_17140	0.69	+4.0
3,632,301	-		IAI47_17140	0.69	+0.3
3,632,318	+		IAI47_17140	0.71	-1.3
3,632,318	+		IAI47_17140	0.71	-0.9
3,632,319	-		IAI47_17140	0.72	+2.1
3,632,319	-		IAI47_17140	0.72	+1.2
3,632,335	+		IAI47_17140	0.74	-0.1
3,632,335	+		IAI47_17140	0.74	-1.2
3,632,336	-		IAI47_17140	0.74	+0.8
3,632,336	-		IAI47_17140	0.74	+1.1
3,632,336	-		IAI47_17140	0.74	-0.2
3,632,367	+		IAI47_17140	0.78	-0.9
3,632,367	+		IAI47_17140	0.78	-1.2
3,632,367	+		IAI47_17140	0.78	-0.7
3,632,367	+		IAI47_17140	0.78	-0.5
3,632,368	-		IAI47_17140	0.78	+0.9
3,632,368	-		IAI47_17140	0.78	-0.8
3,632,368	-		IAI47_17140	0.78	-0.5
3,632,368	-		IAI47_17140	0.78	+1.5
3,632,374	+		IAI47_17140	0.79	+0.4
3,632,383	+		IAI47_17140	0.80	+0.2
3,632,383	+		IAI47_17140	0.80	-1.5
3,632,384	-		IAI47_17140	0.80	+0.4
3,632,384	-		IAI47_17140	0.80	+2.2
3,632,394	+		IAI47_17140	0.81	+0.1
3,632,394	+		IAI47_17140	0.81	+0.5
3,632,394	+		IAI47_17140	0.81	-0.3
3,632,394	+		IAI47_17140	0.81	-0.2
3,632,394	+		IAI47_17140	0.81	-1.4
3,632,394	+		IAI47_17140	0.81	+1.1
3,632,395	-		IAI47_17140	0.81	-0.9
3,632,395	-		IAI47_17140	0.81	-0.8
3,632,395	-		IAI47_17140	0.81	+0.2
3,632,395	-		IAI47_17140	0.81	+1.0
3,632,395	-		IAI47_17140	0.81	-0.4
3,632,395	-		IAI47_17140	0.81	+2.8
3,632,395	-		IAI47_17140	0.81	-0.8
3,632,396	+		IAI47_17140	0.81	+1.5
3,632,396	+		IAI47_17140	0.81	-1.8
3,632,396	+		IAI47_17140	0.81	+1.2
3,632,396	+		IAI47_17140	0.81	+0.7
3,632,397	-		IAI47_17140	0.81	-2.6
3,632,397	-		IAI47_17140	0.81	+1.2
3,632,397	-		IAI47_17140	0.81	-0.9
3,632,397	-		IAI47_17140	0.81	-1.0
3,632,397	-		IAI47_17140	0.81	-1.5
3,632,397	-		IAI47_17140	0.81	+2.5
3,632,414	-		IAI47_17140	0.84	-1.3
3,632,421	+		IAI47_17140	0.85	+1.6
3,632,421	+		IAI47_17140	0.85	+0.2
3,632,421	+		IAI47_17140	0.85	-0.6
3,632,421	+		IAI47_17140	0.85	-1.3
3,632,421	+		IAI47_17140	0.85	+3.8
3,632,422	-		IAI47_17140	0.85	+0.3
3,632,422	-		IAI47_17140	0.85	+0.7
3,632,422	-		IAI47_17140	0.85	-1.3
3,632,422	-		IAI47_17140	0.85	+0.4
3,632,422	-		IAI47_17140	0.85	+0.9
3,632,422	-		IAI47_17140	0.85	-2.1
3,632,467	+				+1.5
3,632,467	+				-0.2
3,632,467	+				+0.6
3,632,468	-				-0.8
3,632,468	-				+0.2
3,632,468	-				+1.6
3,632,468	-				+0.0
3,632,547	+				-0.8
3,632,547	+				-0.6
3,632,547	+				-0.8
3,632,547	+				+0.6
3,632,548	-				+3.1
3,632,548	-				-1.0
3,632,548	-				+0.4
3,632,548	-				+1.4
3,632,548	-				-0.6
3,632,548	-				+0.3
3,632,551	+				+1.4
3,632,551	+				-0.6
3,632,551	+				-1.6
3,632,552	-				+0.9
3,632,552	-				-1.4
3,632,568	-				-0.3
3,632,580	+				+0.3
3,632,580	+				-2.5
3,632,580	+				-0.6
3,632,581	-				+0.8
3,632,581	-				+0.5
3,632,632	+		IAI47_17145	0.11	+4.3
3,632,656	+		IAI47_17145	0.13	-0.9
3,632,657	-		IAI47_17145	0.14	-1.0
3,632,657	-		IAI47_17145	0.14	+1.1
3,632,713	+		IAI47_17145	0.20	-0.6
3,632,713	+		IAI47_17145	0.20	-0.7
3,632,714	-		IAI47_17145	0.21	+0.0
3,632,714	-		IAI47_17145	0.21	+0.2
3,632,714	-		IAI47_17145	0.21	+0.3
3,632,714	-		IAI47_17145	0.21	-1.7
3,632,715	+		IAI47_17145	0.21	-0.2
3,632,715	+		IAI47_17145	0.21	+0.3
3,632,715	+		IAI47_17145	0.21	+3.0
3,632,715	+		IAI47_17145	0.21	+1.0
3,632,715	+		IAI47_17145	0.21	-1.3
3,632,715	+		IAI47_17145	0.21	-1.4
3,632,715	+		IAI47_17145	0.21	+0.6
3,632,715	+		IAI47_17145	0.21	+1.3
3,632,715	+		IAI47_17145	0.21	+1.0
3,632,715	+		IAI47_17145	0.21	+0.3
3,632,715	+		IAI47_17145	0.21	-1.7
3,632,715	+		IAI47_17145	0.21	-0.2
3,632,715	+		IAI47_17145	0.21	-0.3
3,632,716	-		IAI47_17145	0.21	+0.4
3,632,716	-		IAI47_17145	0.21	-1.6
3,632,716	-		IAI47_17145	0.21	+1.0
3,632,716	-		IAI47_17145	0.21	+1.8
3,632,716	-		IAI47_17145	0.21	+1.2
3,632,716	-		IAI47_17145	0.21	-0.9
3,632,716	-		IAI47_17145	0.21	-0.5
3,632,716	-		IAI47_17145	0.21	+1.0
3,632,716	-		IAI47_17145	0.21	+0.5
3,632,716	-		IAI47_17145	0.21	+2.2
3,632,716	-		IAI47_17145	0.21	+0.7
3,632,716	-		IAI47_17145	0.21	-1.5
3,632,716	-		IAI47_17145	0.21	+2.6
3,632,716	-		IAI47_17145	0.21	-1.3
3,632,716	-		IAI47_17145	0.21	-1.7
3,632,716	-		IAI47_17145	0.21	-1.3
3,632,716	-		IAI47_17145	0.21	-2.0
3,632,721	+		IAI47_17145	0.21	-0.5
3,632,721	+		IAI47_17145	0.21	-0.8
3,632,721	+		IAI47_17145	0.21	-0.9
3,632,721	+		IAI47_17145	0.21	+1.3
3,632,721	+		IAI47_17145	0.21	-0.2
3,632,721	+		IAI47_17145	0.21	-0.1
3,632,721	+		IAI47_17145	0.21	-0.3
3,632,721	+		IAI47_17145	0.21	+0.4
3,632,721	+		IAI47_17145	0.21	-0.9
3,632,721	+		IAI47_17145	0.21	-0.1
3,632,722	-		IAI47_17145	0.22	+0.0
3,632,722	-		IAI47_17145	0.22	+1.8
3,632,722	-		IAI47_17145	0.22	-0.2
3,632,722	-		IAI47_17145	0.22	-1.2
3,632,722	-		IAI47_17145	0.22	+0.5
3,632,722	-		IAI47_17145	0.22	-1.8
3,632,722	-		IAI47_17145	0.22	+2.0
3,632,722	-		IAI47_17145	0.22	-0.1
3,632,722	-		IAI47_17145	0.22	+2.3
3,632,722	-		IAI47_17145	0.22	+1.4
3,632,722	-		IAI47_17145	0.22	+0.0
3,632,731	+		IAI47_17145	0.23	+0.0
3,632,732	-		IAI47_17145	0.23	+0.3
3,632,732	-		IAI47_17145	0.23	+1.8
3,632,732	-		IAI47_17145	0.23	-0.2
3,632,732	-		IAI47_17145	0.23	-0.2
3,632,738	+		IAI47_17145	0.24	-1.2
3,632,738	+		IAI47_17145	0.24	+0.5
3,632,738	+		IAI47_17145	0.24	-1.5
3,632,738	+		IAI47_17145	0.24	+0.9
3,632,739	-		IAI47_17145	0.24	+0.1
3,632,747	+		IAI47_17145	0.25	+0.9
3,632,767	+		IAI47_17145	0.27	-0.4
3,632,767	+		IAI47_17145	0.27	+0.7
3,632,767	+		IAI47_17145	0.27	+2.4
3,632,768	-		IAI47_17145	0.27	+2.1
3,632,791	+		IAI47_17145	0.30	-2.1
3,632,792	-		IAI47_17145	0.30	+1.1
3,632,792	-		IAI47_17145	0.30	+2.2
3,632,792	-		IAI47_17145	0.30	-0.9
3,632,811	-		IAI47_17145	0.32	-1.7
3,632,827	+		IAI47_17145	0.34	+0.6
3,632,827	+		IAI47_17145	0.34	-0.8
3,632,828	-		IAI47_17145	0.35	+3.3
3,632,828	-		IAI47_17145	0.35	-0.1
3,632,984	+		IAI47_17145	0.54	-0.2
3,632,984	+		IAI47_17145	0.54	-0.7
3,632,984	+		IAI47_17145	0.54	+0.9
3,632,984	+		IAI47_17145	0.54	+0.3
3,632,985	-		IAI47_17145	0.54	+0.5
3,632,985	-		IAI47_17145	0.54	+0.5
3,632,985	-		IAI47_17145	0.54	+1.5
3,632,985	-		IAI47_17145	0.54	-0.1
3,633,023	-		IAI47_17145	0.58	+0.5
3,633,023	-		IAI47_17145	0.58	+1.4
3,633,023	-		IAI47_17145	0.58	+0.4
3,633,023	-		IAI47_17145	0.58	+0.2
3,633,023	-		IAI47_17145	0.58	+3.0
3,633,055	-		IAI47_17145	0.62	+3.0
3,633,055	-		IAI47_17145	0.62	+1.7
3,633,062	+		IAI47_17145	0.63	-0.3
3,633,063	-		IAI47_17145	0.63	-2.2
3,633,063	-		IAI47_17145	0.63	+0.1
3,633,070	+		IAI47_17145	0.64	-0.7
3,633,070	+		IAI47_17145	0.64	+2.1
3,633,071	-		IAI47_17145	0.64	+0.1
3,633,121	-		IAI47_17145	0.70	+0.7
3,633,121	-		IAI47_17145	0.70	-1.3
3,633,127	+		IAI47_17145	0.71	+1.8
3,633,209	+		IAI47_17145	0.81	+0.1
3,633,296	-				-2.1
3,633,362	+		IAI47_17150	0.11	-0.6
3,633,362	+		IAI47_17150	0.11	+0.5
3,633,362	+		IAI47_17150	0.11	+2.0
3,633,363	-		IAI47_17150	0.12	-1.0
3,633,363	-		IAI47_17150	0.12	+0.1
3,633,365	+		IAI47_17150	0.12	+0.2
3,633,365	+		IAI47_17150	0.12	+2.8
3,633,365	+		IAI47_17150	0.12	+0.1
3,633,365	+		IAI47_17150	0.12	-0.6
3,633,366	-		IAI47_17150	0.13	-0.1
3,633,366	-		IAI47_17150	0.13	-0.1
3,633,366	-		IAI47_17150	0.13	+2.7
3,633,374	+		IAI47_17150	0.16	+4.1
3,633,375	-		IAI47_17150	0.16	+0.7
3,633,375	-		IAI47_17150	0.16	+1.2
3,633,375	-		IAI47_17150	0.16	-2.0
3,633,375	-		IAI47_17150	0.16	+0.9
3,633,387	+		IAI47_17150	0.21	+0.1
3,633,387	+		IAI47_17150	0.21	-0.1
3,633,387	+		IAI47_17150	0.21	+0.9
3,633,387	+		IAI47_17150	0.21	-0.1
3,633,388	-		IAI47_17150	0.21	-0.8
3,633,388	-		IAI47_17150	0.21	+2.3
3,633,399	-		IAI47_17150	0.26	-0.5
3,633,399	-		IAI47_17150	0.26	+1.3
3,633,406	+		IAI47_17150	0.28	-1.3
3,633,432	-		IAI47_17150	0.38	-0.9
3,633,437	+		IAI47_17150	0.40	-1.3
3,633,438	-		IAI47_17150	0.41	-0.2
3,633,448	-		IAI47_17150	0.45	+1.3
3,633,453	+		IAI47_17150	0.47	+0.1
3,633,454	-		IAI47_17150	0.47	+1.9
3,633,476	+		IAI47_17150	0.55	-0.5
3,633,476	+		IAI47_17150	0.55	-1.9
3,633,536	+		IAI47_17150	0.79	-1.3
3,633,536	+		IAI47_17150	0.79	-0.9
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