Strain Fitness in Pantoea sp. MT58 around IAI47_16990

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,602,875	+				-1.1
3,602,875	+				-2.2
3,602,875	+				-2.0
3,602,875	+				-0.5
3,602,875	+				+0.1
3,602,875	+				+1.9
3,602,876	-				+0.7
3,602,876	-				+1.0
3,602,876	-				-0.3
3,602,876	-				+3.0
3,602,876	-				+2.2
3,602,876	-				+0.8
3,602,876	-				-1.6
3,602,876	-				+0.5
3,602,876	-				-0.1
3,602,923	+				-1.7
3,602,923	+				+0.7
3,602,923	+				-0.8
3,602,923	+				-1.7
3,602,923	+				+0.3
3,602,923	+				+0.6
3,602,923	+				+0.7
3,602,923	+				-0.7
3,602,924	-				-1.2
3,602,924	-				+1.4
3,602,924	-				-2.1
3,602,926	+				+1.9
3,602,926	+				-0.6
3,602,926	+				-0.5
3,602,926	+				+1.4
3,602,927	-				+0.6
3,602,945	+				+0.7
3,602,945	+				+1.5
3,602,946	-				-1.1
3,602,946	-				+2.2
3,602,946	-				-1.9
3,602,946	-				-0.2
3,602,946	-				+2.4
3,603,028	+				-1.0
3,603,028	+				-1.9
3,603,028	+				-1.1
3,603,029	-				+2.1
3,603,029	-				+1.0
3,603,048	+				+0.2
3,603,065	+				+0.8
3,603,065	+				-0.1
3,603,065	+				+0.6
3,603,065	+				+1.8
3,603,066	-				-1.5
3,603,066	-				-0.6
3,603,066	-				-0.7
3,603,066	-				-1.6
3,603,119	+				-1.2
3,603,119	+				+0.1
3,603,119	+				-0.7
3,603,119	+				+1.4
3,603,119	+				+0.2
3,603,119	+				+0.1
3,603,119	+				+0.4
3,603,119	+				-1.3
3,603,119	+				+0.5
3,603,120	-				+1.7
3,603,120	-				+0.3
3,603,120	-				-0.9
3,603,120	-				-0.6
3,603,120	-				-0.5
3,603,120	-				-1.8
3,603,120	-				-0.5
3,603,120	-				+2.7
3,603,120	-				-1.5
3,603,120	-				+0.4
3,603,135	+				-1.2
3,603,175	+		IAI47_16985	0.14	+1.0
3,603,175	+		IAI47_16985	0.14	-0.6
3,603,176	-		IAI47_16985	0.15	-0.9
3,603,207	-		IAI47_16985	0.19	+3.5
3,603,207	-		IAI47_16985	0.19	+0.3
3,603,207	-		IAI47_16985	0.19	+2.6
3,603,217	-		IAI47_16985	0.20	-1.3
3,603,217	-		IAI47_16985	0.20	-2.5
3,603,258	+		IAI47_16985	0.26	-0.3
3,603,258	+		IAI47_16985	0.26	+0.4
3,603,258	+		IAI47_16985	0.26	+1.2
3,603,258	+		IAI47_16985	0.26	+0.6
3,603,258	+		IAI47_16985	0.26	-1.6
3,603,258	+		IAI47_16985	0.26	-0.9
3,603,258	+		IAI47_16985	0.26	+0.8
3,603,258	+		IAI47_16985	0.26	-0.6
3,603,258	+		IAI47_16985	0.26	-0.5
3,603,259	-		IAI47_16985	0.26	+0.2
3,603,259	-		IAI47_16985	0.26	+0.5
3,603,259	-		IAI47_16985	0.26	+0.0
3,603,259	-		IAI47_16985	0.26	+0.7
3,603,259	-		IAI47_16985	0.26	-1.2
3,603,259	-		IAI47_16985	0.26	-1.2
3,603,259	-		IAI47_16985	0.26	+1.4
3,603,259	-		IAI47_16985	0.26	-0.2
3,603,259	-		IAI47_16985	0.26	-2.4
3,603,259	-		IAI47_16985	0.26	+0.5
3,603,259	-		IAI47_16985	0.26	-1.2
3,603,403	-		IAI47_16985	0.45	+0.0
3,603,403	-		IAI47_16985	0.45	+0.6
3,603,403	-		IAI47_16985	0.45	-0.5
3,603,403	-		IAI47_16985	0.45	-0.8
3,603,408	+		IAI47_16985	0.46	+0.8
3,603,477	+		IAI47_16985	0.55	-0.4
3,603,477	+		IAI47_16985	0.55	+2.8
3,603,477	+		IAI47_16985	0.55	+2.6
3,603,478	-		IAI47_16985	0.55	+0.7
3,603,478	-		IAI47_16985	0.55	+0.8
3,603,478	-		IAI47_16985	0.55	+0.1
3,603,478	-		IAI47_16985	0.55	+0.3
3,603,478	-		IAI47_16985	0.55	-1.6
3,603,478	-		IAI47_16985	0.55	-1.4
3,603,480	+		IAI47_16985	0.55	+2.1
3,603,481	-		IAI47_16985	0.55	+1.8
3,603,501	+		IAI47_16985	0.58	+0.2
3,603,524	+		IAI47_16985	0.61	-0.8
3,603,524	+		IAI47_16985	0.61	+1.7
3,603,525	-		IAI47_16985	0.61	-0.6
3,603,525	-		IAI47_16985	0.61	+0.8
3,603,525	-		IAI47_16985	0.61	+2.0
3,603,599	+		IAI47_16985	0.71	-0.6
3,603,599	+		IAI47_16985	0.71	-1.7
3,603,599	+		IAI47_16985	0.71	-1.0
3,603,599	+		IAI47_16985	0.71	+1.0
3,603,599	+		IAI47_16985	0.71	+0.8
3,603,599	+		IAI47_16985	0.71	+0.8
3,603,599	+		IAI47_16985	0.71	-0.6
3,603,600	-		IAI47_16985	0.71	+2.8
3,603,600	-		IAI47_16985	0.71	+1.1
3,603,600	-		IAI47_16985	0.71	+0.7
3,603,600	-		IAI47_16985	0.71	-0.9
3,603,600	-		IAI47_16985	0.71	+0.5
3,603,600	-		IAI47_16985	0.71	-1.7
3,603,644	+		IAI47_16985	0.77	-0.1
3,603,772	+				+1.3
3,603,773	-				-0.1
3,603,773	-				+0.9
3,603,799	-				-0.5
3,603,852	-				+0.7
3,603,852	-				+1.8
3,603,852	-				+2.6
3,603,855	-				+0.1
3,603,862	+				+0.1
3,603,940	+				+0.2
3,603,941	-				+1.6
3,603,946	+				-0.2
3,603,946	+				-0.9
3,603,947	-				+2.7
3,603,947	-				-0.5
3,603,947	-				+0.4
3,603,947	-				-0.3
3,604,115	-		IAI47_16990	0.13	+1.1
3,604,193	-		IAI47_16990	0.17	-0.5
3,604,229	-		IAI47_16990	0.19	-0.6
3,604,229	-		IAI47_16990	0.19	+0.4
3,604,231	-		IAI47_16990	0.19	-2.4
3,604,231	-		IAI47_16990	0.19	-0.5
3,604,231	-		IAI47_16990	0.19	-1.6
3,604,231	-		IAI47_16990	0.19	+0.3
3,604,305	-		IAI47_16990	0.23	-1.2
3,604,318	-		IAI47_16990	0.23	-1.7
3,605,835	-		IAI47_16995	0.37	-1.6
3,605,835	-		IAI47_16995	0.37	-2.1
3,605,835	-		IAI47_16995	0.37	+0.7
3,605,835	-		IAI47_16995	0.37	-1.0
3,605,839	-		IAI47_16995	0.44	+2.7
3,605,944	-				+0.6
3,605,944	-				-1.6
3,605,944	-				+1.0
3,605,954	-				-0.0
3,605,965	-				-0.5
3,605,965	-				+1.1
3,605,978	-				-0.3
3,605,978	-				+0.5
3,605,978	-				+0.9
3,605,998	-				+3.3
3,606,044	-				-0.1
3,606,127	-		IAI47_17000	0.17	-0.4
3,606,127	-		IAI47_17000	0.17	-1.6
3,606,127	-		IAI47_17000	0.17	+0.0
3,606,131	-		IAI47_17000	0.18	+0.1
3,606,131	-		IAI47_17000	0.18	-0.3
3,606,134	-		IAI47_17000	0.18	+0.6
3,606,134	-		IAI47_17000	0.18	+0.0
3,606,134	-		IAI47_17000	0.18	-0.6
3,606,134	-		IAI47_17000	0.18	+1.4
3,606,134	-		IAI47_17000	0.18	-1.4
3,606,134	-		IAI47_17000	0.18	+0.4
3,606,134	-		IAI47_17000	0.18	+0.4
3,606,134	-		IAI47_17000	0.18	-1.2
3,606,134	-		IAI47_17000	0.18	+0.3
3,606,134	-		IAI47_17000	0.18	+1.7
3,606,142	-		IAI47_17000	0.19	+0.4
3,606,142	-		IAI47_17000	0.19	-1.1
3,606,146	-		IAI47_17000	0.19	-0.5
3,606,146	-		IAI47_17000	0.19	-0.1
3,606,186	-		IAI47_17000	0.24	-0.3
3,606,186	-		IAI47_17000	0.24	+0.8
3,606,234	-		IAI47_17000	0.29	-1.7
3,606,234	-		IAI47_17000	0.29	-0.4
3,606,234	-		IAI47_17000	0.29	+2.1
3,606,234	-		IAI47_17000	0.29	-2.6
3,606,234	-		IAI47_17000	0.29	-1.6
3,606,234	-		IAI47_17000	0.29	-4.1
3,606,234	-		IAI47_17000	0.29	-0.5
3,606,234	-		IAI47_17000	0.29	-1.5
3,606,245	-		IAI47_17000	0.30	-2.4
3,606,245	-		IAI47_17000	0.30	-1.6
3,606,245	-		IAI47_17000	0.30	-0.1
3,606,245	-		IAI47_17000	0.30	-0.1
3,606,245	-		IAI47_17000	0.30	-1.0
3,606,258	-		IAI47_17000	0.32	-0.5
3,606,258	-		IAI47_17000	0.32	-3.0
3,606,258	-		IAI47_17000	0.32	+0.4
3,606,258	-		IAI47_17000	0.32	-0.8
3,606,258	-		IAI47_17000	0.32	-1.9
3,606,258	-		IAI47_17000	0.32	-1.5
3,606,258	-		IAI47_17000	0.32	-1.8
3,606,258	-		IAI47_17000	0.32	-1.4
3,606,258	-		IAI47_17000	0.32	-2.3
3,606,258	-		IAI47_17000	0.32	-0.8
3,606,350	-		IAI47_17000	0.42	-0.5
3,606,350	-		IAI47_17000	0.42	-2.1
3,606,378	-		IAI47_17000	0.45	-0.5
3,606,425	-		IAI47_17000	0.51	-1.0
3,606,425	-		IAI47_17000	0.51	-0.4
3,606,425	-		IAI47_17000	0.51	-3.4
3,606,440	-		IAI47_17000	0.52	-0.2
3,606,460	-		IAI47_17000	0.55	-1.6
3,606,470	-		IAI47_17000	0.56	+0.4
3,606,470	-		IAI47_17000	0.56	-1.8
3,606,470	-		IAI47_17000	0.56	+1.9
3,606,470	-		IAI47_17000	0.56	+1.8
3,606,470	-		IAI47_17000	0.56	-1.4
3,606,470	-		IAI47_17000	0.56	-2.7
3,606,470	-		IAI47_17000	0.56	-0.8
3,606,470	-		IAI47_17000	0.56	-1.2
3,606,470	-		IAI47_17000	0.56	-0.3
3,606,470	-		IAI47_17000	0.56	-1.6
3,606,476	-		IAI47_17000	0.56	-0.7
3,606,476	-		IAI47_17000	0.56	-0.7
3,606,476	-		IAI47_17000	0.56	-1.3
3,606,476	-		IAI47_17000	0.56	+0.0
3,606,496	-		IAI47_17000	0.59	+0.2
3,606,515	-		IAI47_17000	0.61	+0.3
3,606,515	-		IAI47_17000	0.61	-1.5
3,606,544	-		IAI47_17000	0.64	+0.3
3,606,548	-		IAI47_17000	0.65	-0.3
3,606,548	-		IAI47_17000	0.65	-2.6
3,606,548	-		IAI47_17000	0.65	-1.1
3,606,548	-		IAI47_17000	0.65	-3.5
3,606,548	-		IAI47_17000	0.65	-1.6
3,606,550	-		IAI47_17000	0.65	-0.1
3,606,550	-		IAI47_17000	0.65	+1.2
3,606,550	-		IAI47_17000	0.65	-0.6
3,606,550	-		IAI47_17000	0.65	-0.9
3,606,550	-		IAI47_17000	0.65	-1.8
3,606,556	-		IAI47_17000	0.66	+1.0
3,606,556	-		IAI47_17000	0.66	+1.1
3,606,560	-		IAI47_17000	0.66	+0.3
3,606,560	-		IAI47_17000	0.66	-0.5
3,606,564	-		IAI47_17000	0.66	-1.5
3,606,564	-		IAI47_17000	0.66	+1.9
3,606,579	-		IAI47_17000	0.68	-1.7
3,606,579	-		IAI47_17000	0.68	-1.5
3,606,579	-		IAI47_17000	0.68	-2.6
3,606,579	-		IAI47_17000	0.68	-1.4
3,606,591	-		IAI47_17000	0.69	+1.3
3,606,642	-		IAI47_17000	0.75	-2.1
3,606,642	-		IAI47_17000	0.75	-0.4
3,606,642	-		IAI47_17000	0.75	+0.2
3,606,646	+		IAI47_17000	0.76	-1.2
3,606,646	+		IAI47_17000	0.76	-1.1
3,606,647	-		IAI47_17000	0.76	+0.7
3,606,664	+		IAI47_17000	0.78	-1.0
3,606,665	-		IAI47_17000	0.78	-1.5
3,606,665	-		IAI47_17000	0.78	-1.2
3,606,667	-		IAI47_17000	0.78	-2.1
3,606,667	-		IAI47_17000	0.78	+1.4
3,606,667	-		IAI47_17000	0.78	-1.6
3,606,667	-		IAI47_17000	0.78	-2.9
3,606,733	-		IAI47_17000	0.86	-1.4
3,606,759	+		IAI47_17000	0.88	-2.6
3,606,759	+		IAI47_17000	0.88	+1.7
3,606,760	-		IAI47_17000	0.89	-2.2
3,606,785	+				-2.8
3,606,785	+				-2.8
3,606,786	-				-0.3
3,606,786	-				+1.2
3,606,786	-				+0.6