Strain Fitness in Pantoea sp. MT58 around IAI47_16825

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,561,512	+		IAI47_16815	0.74	-0.5
3,561,513	-		IAI47_16815	0.74	+4.1
3,561,513	-		IAI47_16815	0.74	-0.2
3,561,513	-		IAI47_16815	0.74	-0.7
3,561,547	+		IAI47_16815	0.81	-0.6
3,561,554	+		IAI47_16815	0.82	-1.3
3,561,554	+		IAI47_16815	0.82	+0.6
3,561,554	+		IAI47_16815	0.82	+0.5
3,561,554	+		IAI47_16815	0.82	-1.8
3,561,555	-		IAI47_16815	0.82	-0.3
3,561,555	-		IAI47_16815	0.82	+1.1
3,561,578	-		IAI47_16815	0.87	-1.1
3,561,578	-		IAI47_16815	0.87	+0.3
3,561,578	-		IAI47_16815	0.87	-0.9
3,561,598	+				+0.2
3,561,598	+				-1.5
3,561,599	-				-1.7
3,561,599	-				+0.3
3,561,631	+				-0.7
3,561,631	+				+0.2
3,561,631	+				-0.9
3,561,632	-				+0.3
3,561,640	-				-0.4
3,561,669	+				-0.0
3,561,669	+				+0.6
3,561,670	-				-1.7
3,561,670	-				-2.4
3,561,671	+				+4.1
3,561,671	+				+1.1
3,561,671	+				-1.3
3,561,671	+				+1.3
3,561,671	+				+1.4
3,561,671	+				-1.3
3,561,671	+				-0.4
3,561,671	+				-0.3
3,561,672	-				+0.6
3,561,672	-				+1.6
3,561,672	-				+2.1
3,561,672	-				+0.2
3,561,672	-				+1.0
3,561,672	-				-0.5
3,561,709	+				+0.2
3,561,709	+				+0.6
3,561,748	+				+0.2
3,561,774	+		IAI47_16820	0.12	+0.8
3,561,775	-		IAI47_16820	0.13	-0.5
3,561,784	-		IAI47_16820	0.14	-1.4
3,561,784	-		IAI47_16820	0.14	+1.3
3,561,808	+		IAI47_16820	0.17	+0.3
3,561,808	-		IAI47_16820	0.17	-0.9
3,561,809	-		IAI47_16820	0.17	+0.5
3,561,812	+		IAI47_16820	0.17	+0.9
3,561,812	+		IAI47_16820	0.17	-0.4
3,561,812	+		IAI47_16820	0.17	+0.6
3,561,812	+		IAI47_16820	0.17	-1.1
3,561,813	-		IAI47_16820	0.18	-0.1
3,561,813	-		IAI47_16820	0.18	+2.3
3,561,854	+		IAI47_16820	0.23	-0.1
3,561,855	-		IAI47_16820	0.23	+0.2
3,561,855	-		IAI47_16820	0.23	-0.1
3,561,855	-		IAI47_16820	0.23	+0.3
3,561,855	-		IAI47_16820	0.23	-0.9
3,561,881	+		IAI47_16820	0.27	-0.6
3,561,881	+		IAI47_16820	0.27	-1.4
3,561,882	-		IAI47_16820	0.27	-0.8
3,561,882	-		IAI47_16820	0.27	+1.1
3,561,882	-		IAI47_16820	0.27	-0.1
3,561,926	+		IAI47_16820	0.32	-1.7
3,561,926	+		IAI47_16820	0.32	+0.0
3,561,926	+		IAI47_16820	0.32	+1.1
3,561,926	+		IAI47_16820	0.32	-0.5
3,561,926	+		IAI47_16820	0.32	-0.8
3,561,927	-		IAI47_16820	0.33	-1.7
3,561,927	-		IAI47_16820	0.33	-0.5
3,561,927	-		IAI47_16820	0.33	+0.9
3,561,927	-		IAI47_16820	0.33	+0.3
3,561,927	-		IAI47_16820	0.33	-0.6
3,561,927	-		IAI47_16820	0.33	-1.1
3,562,025	+		IAI47_16820	0.45	-1.8
3,562,026	-		IAI47_16820	0.46	-0.6
3,562,026	-		IAI47_16820	0.46	+1.5
3,562,026	-		IAI47_16820	0.46	+2.6
3,562,047	+		IAI47_16820	0.48	+1.1
3,562,047	+		IAI47_16820	0.48	-2.7
3,562,064	+		IAI47_16820	0.51	+0.4
3,562,064	+		IAI47_16820	0.51	-0.2
3,562,065	-		IAI47_16820	0.51	+2.0
3,562,065	-		IAI47_16820	0.51	-0.8
3,562,086	+		IAI47_16820	0.53	-0.7
3,562,086	+		IAI47_16820	0.53	-0.2
3,562,086	+		IAI47_16820	0.53	-0.7
3,562,087	-		IAI47_16820	0.54	+0.3
3,562,087	-		IAI47_16820	0.54	+1.0
3,562,087	-		IAI47_16820	0.54	+0.7
3,562,167	+		IAI47_16820	0.64	-1.1
3,562,179	+		IAI47_16820	0.66	-0.6
3,562,180	-		IAI47_16820	0.66	+1.3
3,562,209	+		IAI47_16820	0.70	+0.6
3,562,209	+		IAI47_16820	0.70	+0.3
3,562,209	+		IAI47_16820	0.70	+1.6
3,562,220	+		IAI47_16820	0.71	-0.6
3,562,242	+		IAI47_16820	0.74	+0.6
3,562,243	-		IAI47_16820	0.74	-0.7
3,562,271	+		IAI47_16820	0.78	-0.1
3,562,271	+		IAI47_16820	0.78	+0.3
3,562,272	-		IAI47_16820	0.78	+0.6
3,562,272	-		IAI47_16820	0.78	+0.2
3,562,272	-		IAI47_16820	0.78	+1.3
3,562,272	-		IAI47_16820	0.78	-0.3
3,562,272	-		IAI47_16820	0.78	+1.0
3,562,272	-		IAI47_16820	0.78	+0.1
3,562,272	-		IAI47_16820	0.78	-1.2
3,562,272	-		IAI47_16820	0.78	+0.7
3,562,409	+				-2.9
3,562,409	+				+0.3
3,562,410	-				+1.3
3,562,410	-				-1.6
3,562,424	-				+0.1
3,562,424	-				-1.4
3,562,433	+				+1.3
3,562,433	+				-0.3
3,562,433	+				-1.6
3,562,434	-				-0.3
3,562,434	-				+0.3
3,562,434	-				+2.1
3,562,434	-				+1.5
3,562,494	+				+0.1
3,562,494	+				-1.9
3,562,494	+				+0.7
3,562,494	+				-1.8
3,562,495	-				+1.2
3,562,495	-				-1.0
3,562,495	-				+0.9
3,562,495	-				+0.1
3,562,498	+				-0.0
3,562,498	+				+1.1
3,562,499	-				-1.5
3,562,499	-				-1.0
3,562,499	-				-1.0
3,562,508	+				+0.7
3,562,508	+				+0.3
3,562,509	-				+0.2
3,562,514	+				-0.7
3,562,514	+				-0.9
3,562,514	+				-0.3
3,562,515	-				-0.3
3,562,515	-				-1.2
3,562,515	-				-1.0
3,562,579	+		IAI47_16825	0.19	-0.7
3,562,597	+		IAI47_16825	0.24	-0.5
3,562,598	-		IAI47_16825	0.24	+0.3
3,562,598	-		IAI47_16825	0.24	-0.4
3,562,598	-		IAI47_16825	0.24	-0.4
3,562,609	+		IAI47_16825	0.26	+0.1
3,562,609	+		IAI47_16825	0.26	+2.1
3,562,609	+		IAI47_16825	0.26	+1.2
3,562,609	+		IAI47_16825	0.26	-0.1
3,562,609	+		IAI47_16825	0.26	+0.8
3,562,610	-		IAI47_16825	0.27	-0.3
3,562,610	-		IAI47_16825	0.27	+1.1
3,562,610	-		IAI47_16825	0.27	-1.7
3,562,610	-		IAI47_16825	0.27	+0.3
3,562,610	-		IAI47_16825	0.27	-0.8
3,562,610	-		IAI47_16825	0.27	-0.7
3,562,610	-		IAI47_16825	0.27	+0.2
3,562,610	-		IAI47_16825	0.27	-0.1
3,562,610	-		IAI47_16825	0.27	-1.1
3,562,682	+		IAI47_16825	0.44	-0.5
3,562,682	+		IAI47_16825	0.44	+0.1
3,562,682	+		IAI47_16825	0.44	-1.9
3,562,682	+		IAI47_16825	0.44	-0.2
3,562,683	-		IAI47_16825	0.44	-0.9
3,562,685	+		IAI47_16825	0.44	-0.4
3,562,686	-		IAI47_16825	0.45	-0.3
3,562,747	+		IAI47_16825	0.59	-1.0
3,562,747	+		IAI47_16825	0.59	+1.1
3,562,748	-		IAI47_16825	0.59	-0.7
3,562,748	-		IAI47_16825	0.59	-0.1
3,562,796	+		IAI47_16825	0.71	+0.7
3,562,796	+		IAI47_16825	0.71	-1.4
3,562,823	+		IAI47_16825	0.77	-1.9
3,562,823	+		IAI47_16825	0.77	+0.9
3,562,823	+		IAI47_16825	0.77	-0.6
3,562,823	+		IAI47_16825	0.77	-0.3
3,562,824	-		IAI47_16825	0.77	-1.7
3,562,824	-		IAI47_16825	0.77	+0.5
3,562,824	-		IAI47_16825	0.77	-2.2
3,562,824	-		IAI47_16825	0.77	-1.5
3,562,825	+		IAI47_16825	0.78	+1.7
3,562,825	+		IAI47_16825	0.78	+0.1
3,562,826	-		IAI47_16825	0.78	-1.1
3,562,826	-		IAI47_16825	0.78	-0.5
3,562,869	-		IAI47_16825	0.88	+0.9
3,562,869	-		IAI47_16825	0.88	-0.4
3,562,869	-		IAI47_16825	0.88	-0.9
3,562,903	-				-0.3
3,562,903	-				-0.3
3,562,912	+				-0.5
3,562,912	+				-0.8
3,562,912	+				-1.2
3,562,912	+				+1.9
3,562,912	+				-0.8
3,562,912	+				-0.9
3,562,913	-				-0.6
3,562,913	-				-1.0
3,562,913	-				+0.3
3,562,913	-				+0.1
3,562,913	-				-1.1
3,562,913	-				-1.6
3,562,913	-				+0.6
3,562,947	-				+0.4
3,562,954	+				-1.4
3,562,982	+				+0.8
3,563,000	+				-0.3
3,563,079	+				-0.3
3,563,079	+				-0.1
3,563,079	+				-2.1
3,563,079	+				-0.0
3,563,079	+				-1.0
3,563,079	+				-1.3
3,563,079	+				-1.2
3,563,079	+				+0.2
3,563,080	-				-0.4
3,563,080	-				-2.0
3,563,080	-				-1.9
3,563,080	-				-0.1
3,563,080	-				+0.5
3,563,080	-				-0.4
3,563,080	-				+1.0
3,563,080	-				-0.4
3,563,080	-				+0.9
3,563,080	-				+1.6
3,563,092	+				-0.9
3,563,124	+				-2.2
3,563,168	+				-0.5
3,563,168	+				+0.5
3,563,203	+		IAI47_16830	0.12	+2.0
3,563,203	+		IAI47_16830	0.12	+0.3
3,563,203	+		IAI47_16830	0.12	+0.3
3,563,214	+		IAI47_16830	0.13	-0.0
3,563,214	+		IAI47_16830	0.13	+0.8
3,563,214	+		IAI47_16830	0.13	+0.9
3,563,215	-		IAI47_16830	0.13	+1.3
3,563,254	-		IAI47_16830	0.17	+0.9
3,563,254	-		IAI47_16830	0.17	-0.7
3,563,281	+		IAI47_16830	0.20	-0.4
3,563,281	+		IAI47_16830	0.20	+0.1
3,563,281	+		IAI47_16830	0.20	-1.0
3,563,282	-		IAI47_16830	0.20	+2.2
3,563,305	+		IAI47_16830	0.22	+0.5
3,563,305	+		IAI47_16830	0.22	-0.2
3,563,305	+		IAI47_16830	0.22	+0.3
3,563,305	+		IAI47_16830	0.22	-1.2
3,563,305	+		IAI47_16830	0.22	+1.4
3,563,305	+		IAI47_16830	0.22	-0.0
3,563,305	+		IAI47_16830	0.22	+0.3
3,563,305	+		IAI47_16830	0.22	+0.3
3,563,305	+		IAI47_16830	0.22	-0.9
3,563,305	+		IAI47_16830	0.22	+1.9
3,563,305	+		IAI47_16830	0.22	+1.1
3,563,305	+		IAI47_16830	0.22	+0.3
3,563,306	-		IAI47_16830	0.22	+0.1
3,563,306	-		IAI47_16830	0.22	+1.7
3,563,306	-		IAI47_16830	0.22	-0.3
3,563,337	+		IAI47_16830	0.25	+0.6
3,563,337	+		IAI47_16830	0.25	-1.6
3,563,338	-		IAI47_16830	0.26	-0.5
3,563,338	-		IAI47_16830	0.26	+1.3
3,563,380	+		IAI47_16830	0.30	+0.8
3,563,380	+		IAI47_16830	0.30	+0.7
3,563,380	+		IAI47_16830	0.30	+1.1
3,563,380	+		IAI47_16830	0.30	+1.5
3,563,380	+		IAI47_16830	0.30	+1.1
3,563,381	-		IAI47_16830	0.30	+0.1
3,563,381	-		IAI47_16830	0.30	+1.5
3,563,381	-		IAI47_16830	0.30	+0.2
3,563,381	-		IAI47_16830	0.30	-0.3
3,563,381	-		IAI47_16830	0.30	+0.6
3,563,381	-		IAI47_16830	0.30	+1.2
3,563,381	-		IAI47_16830	0.30	-0.1
3,563,381	-		IAI47_16830	0.30	+0.8
3,563,381	-		IAI47_16830	0.30	+0.6
3,563,381	-		IAI47_16830	0.30	-0.1
3,563,381	-		IAI47_16830	0.30	-1.1
3,563,388	+		IAI47_16830	0.30	+3.0
3,563,388	+		IAI47_16830	0.30	-1.2
3,563,388	+		IAI47_16830	0.30	-1.8
3,563,395	+		IAI47_16830	0.31	+1.0
3,563,470	-		IAI47_16830	0.39	+0.3
3,563,560	+		IAI47_16830	0.47	-0.7
3,563,560	+		IAI47_16830	0.47	-0.2
3,563,561	-		IAI47_16830	0.48	+1.0
3,563,589	+		IAI47_16830	0.50	+1.0
3,563,589	+		IAI47_16830	0.50	-1.1
3,563,590	-		IAI47_16830	0.50	+2.7
3,563,590	-		IAI47_16830	0.50	-1.2
3,563,590	-		IAI47_16830	0.50	+1.2
3,563,595	+		IAI47_16830	0.51	-0.2
3,563,595	+		IAI47_16830	0.51	-0.5
3,563,595	+		IAI47_16830	0.51	+1.2
3,563,595	+		IAI47_16830	0.51	+1.5
3,563,596	-		IAI47_16830	0.51	+1.1
3,563,596	-		IAI47_16830	0.51	-0.6
3,563,596	-		IAI47_16830	0.51	-2.9
3,563,596	-		IAI47_16830	0.51	+0.3
3,563,596	-		IAI47_16830	0.51	+0.5
3,563,596	-		IAI47_16830	0.51	+1.6
3,563,596	-		IAI47_16830	0.51	+1.1
3,563,596	-		IAI47_16830	0.51	+0.6
3,563,596	-		IAI47_16830	0.51	+0.0
3,563,733	+		IAI47_16830	0.65	-1.1
3,563,733	+		IAI47_16830	0.65	+0.6
3,563,733	+		IAI47_16830	0.65	-1.1
3,563,733	+		IAI47_16830	0.65	-2.1
3,563,733	+		IAI47_16830	0.65	+0.4
3,563,734	-		IAI47_16830	0.65	-0.7
3,563,763	+		IAI47_16830	0.68	+0.6
3,563,763	+		IAI47_16830	0.68	-0.8
3,563,764	-		IAI47_16830	0.68	-0.9
3,563,764	-		IAI47_16830	0.68	+2.4
3,563,767	+		IAI47_16830	0.68	-0.8
3,563,821	-		IAI47_16830	0.73	-0.9
3,563,840	-		IAI47_16830	0.75	+1.5
3,563,886	+		IAI47_16830	0.80	-0.3
3,563,887	-		IAI47_16830	0.80	-1.7