Strain Fitness in Pantoea sp. MT58 around IAI47_16765

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,547,410	+				+0.7
3,547,410	+				-1.4
3,547,426	-				+0.3
3,547,426	-				+0.9
3,547,426	-				+0.9
3,547,433	+				-1.4
3,547,434	-				-0.3
3,547,467	+				-0.7
3,547,468	-				+0.1
3,547,488	+				-1.4
3,547,498	+				-1.0
3,547,498	+				+0.5
3,547,499	-				+1.0
3,547,522	+				+1.0
3,547,523	-				+1.3
3,547,560	+				-2.1
3,547,560	+				+0.9
3,547,598	+				+0.7
3,547,598	+				+0.7
3,547,599	-				-0.6
3,547,611	+				-1.4
3,547,611	+				-0.1
3,547,611	+				-0.0
3,547,611	+				-0.5
3,547,611	+				-1.0
3,547,611	+				+1.1
3,547,612	-				+2.2
3,547,612	-				-2.1
3,547,612	-				+0.4
3,547,612	-				-0.5
3,547,612	-				-0.8
3,547,612	-				-1.2
3,547,614	+				+2.0
3,547,614	+				-0.8
3,547,614	+				+0.9
3,547,614	+				+2.0
3,547,615	-				-1.0
3,547,615	-				+1.0
3,547,615	-				+1.5
3,547,615	-				+1.1
3,547,624	+				+0.7
3,547,624	+				-0.4
3,547,624	+				-1.6
3,547,634	+				-0.8
3,547,635	-				+0.5
3,547,669	-				+1.5
3,547,762	-		IAI47_16760	0.21	+0.3
3,547,770	+		IAI47_16760	0.22	+0.7
3,547,770	+		IAI47_16760	0.22	+1.5
3,547,771	-		IAI47_16760	0.22	+0.8
3,547,771	-		IAI47_16760	0.22	+1.9
3,547,837	+		IAI47_16760	0.31	+1.5
3,547,838	-		IAI47_16760	0.31	-2.8
3,547,888	-		IAI47_16760	0.38	-1.3
3,547,888	-		IAI47_16760	0.38	+1.4
3,548,100	+		IAI47_16760	0.67	-0.8
3,548,100	+		IAI47_16760	0.67	+0.7
3,548,101	-		IAI47_16760	0.67	-0.4
3,548,101	-		IAI47_16760	0.67	-0.3
3,548,135	+		IAI47_16760	0.71	+0.3
3,548,239	+		IAI47_16760	0.85	+0.5
3,548,239	+		IAI47_16760	0.85	-1.8
3,548,239	+		IAI47_16760	0.85	-0.9
3,548,239	+		IAI47_16760	0.85	+1.6
3,548,240	-		IAI47_16760	0.85	+1.1
3,548,240	-		IAI47_16760	0.85	-0.2
3,548,240	-		IAI47_16760	0.85	+1.4
3,548,240	-		IAI47_16760	0.85	+0.2
3,548,240	-		IAI47_16760	0.85	-0.0
3,548,240	-		IAI47_16760	0.85	+0.7
3,548,356	+				-0.5
3,548,356	+				-1.0
3,548,356	+				-1.1
3,548,356	+				+1.5
3,548,357	-				-1.0
3,548,368	+				+1.2
3,548,368	+				+0.1
3,548,368	+				+0.0
3,548,368	+				-0.5
3,548,369	-				-2.1
3,548,369	-				+0.9
3,548,369	-				-1.0
3,548,369	-				+2.0
3,548,369	-				+0.1
3,548,369	-				+2.4
3,548,371	+				+0.8
3,548,371	+				-1.0
3,548,372	-				+1.3
3,548,428	+				+0.5
3,548,428	+				-0.3
3,548,429	-				+2.5
3,548,442	+				+1.9
3,548,442	+				-0.1
3,548,443	-				+0.8
3,548,466	+				+0.6
3,548,466	+				-1.7
3,548,530	+		IAI47_16765	0.16	+0.0
3,548,530	+		IAI47_16765	0.16	+1.2
3,548,530	+		IAI47_16765	0.16	+0.2
3,548,530	+		IAI47_16765	0.16	+1.9
3,548,531	-		IAI47_16765	0.16	-0.2
3,548,531	-		IAI47_16765	0.16	+2.1
3,548,662	+		IAI47_16765	0.29	-1.0
3,548,662	+		IAI47_16765	0.29	-1.0
3,548,663	-		IAI47_16765	0.29	-0.9
3,548,663	-		IAI47_16765	0.29	-0.9
3,548,663	-		IAI47_16765	0.29	+1.8
3,548,728	+		IAI47_16765	0.36	-0.1
3,548,728	+		IAI47_16765	0.36	-0.8
3,548,729	-		IAI47_16765	0.36	-1.0
3,548,729	-		IAI47_16765	0.36	-2.4
3,548,744	-		IAI47_16765	0.37	+0.8
3,548,750	+		IAI47_16765	0.38	+0.2
3,548,750	+		IAI47_16765	0.38	-1.1
3,548,750	+		IAI47_16765	0.38	-1.0
3,548,750	+		IAI47_16765	0.38	-1.0
3,548,750	+		IAI47_16765	0.38	+0.2
3,548,750	+		IAI47_16765	0.38	+1.4
3,548,751	-		IAI47_16765	0.38	-0.4
3,548,751	-		IAI47_16765	0.38	+5.0
3,548,770	+		IAI47_16765	0.40	-0.8
3,548,770	+		IAI47_16765	0.40	+1.7
3,548,831	+		IAI47_16765	0.46	-0.4
3,548,831	+		IAI47_16765	0.46	-1.9
3,548,831	+		IAI47_16765	0.46	+1.1
3,548,832	-		IAI47_16765	0.46	+3.2
3,548,855	-		IAI47_16765	0.48	+1.0
3,548,870	-		IAI47_16765	0.50	-2.2
3,548,941	+		IAI47_16765	0.57	-0.7
3,548,942	-		IAI47_16765	0.57	+0.1
3,548,956	+		IAI47_16765	0.58	+0.6
3,548,956	+		IAI47_16765	0.58	+1.4
3,548,957	-		IAI47_16765	0.58	+0.8
3,548,957	-		IAI47_16765	0.58	-0.5
3,548,957	-		IAI47_16765	0.58	-1.7
3,548,972	+		IAI47_16765	0.60	+0.3
3,548,973	-		IAI47_16765	0.60	-0.1
3,548,973	-		IAI47_16765	0.60	-0.5
3,548,973	-		IAI47_16765	0.60	+0.3
3,548,973	-		IAI47_16765	0.60	-1.5
3,549,022	+		IAI47_16765	0.65	-0.3
3,549,022	+		IAI47_16765	0.65	+1.3
3,549,023	-		IAI47_16765	0.65	-0.6
3,549,023	-		IAI47_16765	0.65	+0.0
3,549,023	-		IAI47_16765	0.65	-1.8
3,549,023	-		IAI47_16765	0.65	-0.8
3,549,025	+		IAI47_16765	0.65	+1.3
3,549,050	+		IAI47_16765	0.68	+3.0
3,549,050	+		IAI47_16765	0.68	+1.3
3,549,051	-		IAI47_16765	0.68	-0.3
3,549,051	-		IAI47_16765	0.68	+2.0
3,549,051	-		IAI47_16765	0.68	+2.7
3,549,051	-		IAI47_16765	0.68	+0.9
3,549,064	+		IAI47_16765	0.69	+2.4
3,549,065	-		IAI47_16765	0.69	+0.8
3,549,122	-		IAI47_16765	0.75	+1.3
3,549,122	-		IAI47_16765	0.75	+0.5
3,549,122	-		IAI47_16765	0.75	-0.4
3,549,122	-		IAI47_16765	0.75	+0.0
3,549,175	+		IAI47_16765	0.80	-0.8
3,549,175	+		IAI47_16765	0.80	-1.0
3,549,175	+		IAI47_16765	0.80	-0.0
3,549,219	+		IAI47_16765	0.85	+1.8
3,549,268	+		IAI47_16765	0.89	-1.8
3,549,268	+		IAI47_16765	0.89	-0.4
3,549,268	+		IAI47_16765	0.89	+1.3
3,549,268	+		IAI47_16765	0.89	+0.6
3,549,268	+		IAI47_16765	0.89	+2.5
3,549,268	+		IAI47_16765	0.89	+0.5
3,549,269	-		IAI47_16765	0.90	-1.5
3,549,269	-		IAI47_16765	0.90	+0.4
3,549,269	-		IAI47_16765	0.90	-0.7
3,549,281	+				-0.1
3,549,282	-				-1.7
3,549,301	+				+3.3
3,549,302	-				-1.3
3,549,388	+				-0.5
3,549,389	-				+0.3
3,549,422	-				-1.0
3,549,428	-				-0.9
3,549,434	+				-0.2
3,549,435	-				+0.3
3,549,499	+		IAI47_16770	0.11	-0.1
3,549,499	+		IAI47_16770	0.11	-0.0
3,549,499	+		IAI47_16770	0.11	-0.3
3,549,499	+		IAI47_16770	0.11	+0.9
3,549,499	+		IAI47_16770	0.11	-2.3
3,549,499	+		IAI47_16770	0.11	+1.0
3,549,500	-		IAI47_16770	0.11	+2.2
3,549,500	-		IAI47_16770	0.11	-0.2
3,549,500	-		IAI47_16770	0.11	+1.2
3,549,500	-		IAI47_16770	0.11	-0.8
3,549,500	-		IAI47_16770	0.11	+0.4
3,549,613	+		IAI47_16770	0.22	-0.9
3,549,613	+		IAI47_16770	0.22	-0.3
3,549,613	+		IAI47_16770	0.22	-1.6
3,549,613	+		IAI47_16770	0.22	+1.5
3,549,614	-		IAI47_16770	0.22	-1.0
3,549,614	-		IAI47_16770	0.22	-0.4
3,549,614	-		IAI47_16770	0.22	-0.3
3,549,715	+		IAI47_16770	0.31	-0.3
3,549,775	+		IAI47_16770	0.37	+1.8
3,549,776	-		IAI47_16770	0.37	-0.6
3,549,776	-		IAI47_16770	0.37	-1.6
3,549,776	-		IAI47_16770	0.37	-1.0
3,549,776	-		IAI47_16770	0.37	-0.3
3,549,797	+		IAI47_16770	0.39	+0.3
3,549,798	-		IAI47_16770	0.39	-1.0
3,549,798	-		IAI47_16770	0.39	-0.2
3,549,866	+		IAI47_16770	0.45	+0.3
3,549,867	-		IAI47_16770	0.45	-0.9
3,549,867	-				-1.1
3,549,867	-		IAI47_16770	0.45	+1.1
3,549,889	+		IAI47_16770	0.47	-0.2
3,549,890	-		IAI47_16770	0.47	-0.8
3,549,913	+		IAI47_16770	0.50	+2.4
3,549,913	+		IAI47_16770	0.50	+1.1
3,549,913	+		IAI47_16770	0.50	+1.8
3,549,913	+		IAI47_16770	0.50	+1.1
3,549,914	-		IAI47_16770	0.50	+0.4
3,549,914	-		IAI47_16770	0.50	-1.0
3,549,914	-		IAI47_16770	0.50	-1.0
3,549,914	-		IAI47_16770	0.50	+3.6
3,549,943	+		IAI47_16770	0.52	+0.9
3,549,943	+		IAI47_16770	0.52	+1.7
3,549,943	+		IAI47_16770	0.52	-0.3
3,549,943	+		IAI47_16770	0.52	+1.1
3,549,943	+		IAI47_16770	0.52	+2.7
3,549,944	-		IAI47_16770	0.53	-0.9
3,549,944	-		IAI47_16770	0.53	-0.8
3,549,944	-		IAI47_16770	0.53	-0.8
3,549,944	-		IAI47_16770	0.53	+0.1
3,550,058	-		IAI47_16770	0.63	+1.0
3,550,058	-		IAI47_16770	0.63	-1.1
3,550,069	-		IAI47_16770	0.64	+1.9
3,550,105	+		IAI47_16770	0.67	-0.4
3,550,105	+		IAI47_16770	0.67	+2.1
3,550,105	+		IAI47_16770	0.67	+0.0
3,550,105	+		IAI47_16770	0.67	+1.4
3,550,105	+		IAI47_16770	0.67	+1.1
3,550,106	-		IAI47_16770	0.68	-0.6
3,550,106	-		IAI47_16770	0.68	-1.1
3,550,172	+		IAI47_16770	0.74	-0.5
3,550,173	-		IAI47_16770	0.74	-1.1
3,550,173	-		IAI47_16770	0.74	+0.1
3,550,193	+		IAI47_16770	0.76	+1.7
3,550,193	+		IAI47_16770	0.76	+1.8
3,550,194	-		IAI47_16770	0.76	+0.2
3,550,194	-		IAI47_16770	0.76	+0.1
3,550,194	-		IAI47_16770	0.76	-0.2
3,550,194	-		IAI47_16770	0.76	+1.0
3,550,194	-		IAI47_16770	0.76	-1.0
3,550,196	+		IAI47_16770	0.76	+0.1
3,550,196	+		IAI47_16770	0.76	-2.2
3,550,196	+		IAI47_16770	0.76	-1.5
3,550,196	+		IAI47_16770	0.76	+0.3
3,550,197	-		IAI47_16770	0.76	+1.2
3,550,197	-		IAI47_16770	0.76	-0.3
3,550,197	-		IAI47_16770	0.76	+2.8
3,550,197	-		IAI47_16770	0.76	-0.3
3,550,197	-		IAI47_16770	0.76	-1.4
3,550,200	-		IAI47_16770	0.76	+2.8
3,550,277	-		IAI47_16770	0.83	+0.1
3,550,346	+		IAI47_16770	0.90	-0.6
3,550,346	+		IAI47_16770	0.90	+0.6
3,550,347	-		IAI47_16770	0.90	-0.2
3,550,347	-		IAI47_16770	0.90	+0.3
3,550,347	-		IAI47_16770	0.90	-1.2
3,550,352	+				-0.2
3,550,352	+				+3.1
3,550,352	+				-1.0
3,550,352	+				-0.9
3,550,352	+				+1.1
3,550,352	+				-0.5
3,550,353	-				+1.8
3,550,353	-				+0.9
3,550,353	-				+0.5
3,550,353	-				-2.0
3,550,353	-				+0.4
3,550,353	-				+1.3
3,550,353	-				-0.3
3,550,353	-				-0.2
3,550,353	-				-0.1
3,550,360	+				+0.2
3,550,360	+				-0.6
3,550,361	-				+1.9
3,550,361	-				-0.7