Strain Fitness in Pantoea sp. MT58 around IAI47_14825

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,124,123	+				+0.2
3,124,169	-				+0.3
3,124,169	-				-0.4
3,124,179	+				-1.1
3,124,179	+				+2.6
3,124,179	+				-2.1
3,124,179	+				-0.2
3,124,200	+				-0.1
3,124,200	+				+0.2
3,124,200	+				-0.5
3,124,200	+				+0.8
3,124,200	+				-0.3
3,124,201	-				-0.5
3,124,201	-				+0.1
3,124,201	-				-0.4
3,124,201	-				+0.7
3,124,205	-				-0.9
3,124,205	-				+0.1
3,124,205	-				-1.2
3,124,205	-				-0.5
3,124,215	+				-1.1
3,124,215	+				+0.6
3,124,216	-				-0.1
3,124,270	+				-1.7
3,124,307	+				-0.5
3,124,307	+				+1.0
3,124,324	+				-0.6
3,124,372	+		IAI47_14820	0.11	-0.5
3,124,372	+		IAI47_14820	0.11	-0.4
3,124,394	+		IAI47_14820	0.14	+0.4
3,124,395	-		IAI47_14820	0.14	-0.5
3,124,443	+		IAI47_14820	0.20	+0.4
3,124,443	+		IAI47_14820	0.20	+1.1
3,124,444	-		IAI47_14820	0.20	+3.2
3,124,457	+		IAI47_14820	0.22	+0.9
3,124,461	+		IAI47_14820	0.22	+0.2
3,124,461	+		IAI47_14820	0.22	-2.1
3,124,461	+		IAI47_14820	0.22	+1.9
3,124,462	-		IAI47_14820	0.22	-2.0
3,124,462	-		IAI47_14820	0.22	+1.7
3,124,462	-		IAI47_14820	0.22	+0.7
3,124,462	-		IAI47_14820	0.22	-0.2
3,124,501	+		IAI47_14820	0.27	+0.9
3,124,502	-		IAI47_14820	0.27	+0.5
3,124,542	+		IAI47_14820	0.32	+0.9
3,124,543	-		IAI47_14820	0.32	-1.1
3,124,597	-		IAI47_14820	0.39	+1.5
3,124,597	-		IAI47_14820	0.39	+0.1
3,124,597	-		IAI47_14820	0.39	+0.3
3,124,662	+		IAI47_14820	0.47	+1.6
3,124,663	-		IAI47_14820	0.47	+1.5
3,124,710	+		IAI47_14820	0.53	+0.9
3,124,711	-		IAI47_14820	0.53	+0.3
3,124,760	+		IAI47_14820	0.59	+1.8
3,124,760	+		IAI47_14820	0.59	-0.8
3,124,761	-		IAI47_14820	0.59	+2.8
3,124,800	+		IAI47_14820	0.64	-1.4
3,124,823	+		IAI47_14820	0.67	-0.7
3,124,823	+		IAI47_14820	0.67	+0.9
3,124,824	-		IAI47_14820	0.67	+0.3
3,124,845	+		IAI47_14820	0.69	-1.1
3,124,845	+		IAI47_14820	0.69	-1.5
3,124,845	+		IAI47_14820	0.69	-0.5
3,124,845	+		IAI47_14820	0.69	-0.8
3,124,846	-		IAI47_14820	0.69	-1.7
3,124,846	-		IAI47_14820	0.69	+2.9
3,124,846	-		IAI47_14820	0.69	-0.5
3,124,846	-		IAI47_14820	0.69	-1.1
3,124,846	-		IAI47_14820	0.69	-1.0
3,124,846	-		IAI47_14820	0.69	-1.0
3,124,846	-		IAI47_14820	0.69	+1.1
3,124,869	+		IAI47_14820	0.72	+0.1
3,124,870	-		IAI47_14820	0.72	-0.2
3,124,870	-		IAI47_14820	0.72	-0.4
3,124,907	-		IAI47_14820	0.77	+1.8
3,124,909	+		IAI47_14820	0.77	-1.5
3,124,909	+		IAI47_14820	0.77	-1.8
3,124,909	+		IAI47_14820	0.77	+0.6
3,124,909	+		IAI47_14820	0.77	-1.0
3,124,909	+		IAI47_14820	0.77	-2.0
3,124,909	+		IAI47_14820	0.77	-1.6
3,124,909	+		IAI47_14820	0.77	-2.9
3,124,909	+		IAI47_14820	0.77	-0.9
3,124,910	-		IAI47_14820	0.77	+0.7
3,124,910	-		IAI47_14820	0.77	-0.2
3,124,910	-		IAI47_14820	0.77	+0.3
3,124,910	-		IAI47_14820	0.77	-0.7
3,124,910	-		IAI47_14820	0.77	-1.2
3,124,910	-		IAI47_14820	0.77	+1.2
3,124,910	-		IAI47_14820	0.77	+1.1
3,124,910	-		IAI47_14820	0.77	-1.4
3,124,910	-		IAI47_14820	0.77	-0.6
3,124,920	+		IAI47_14820	0.78	-0.4
3,124,920	+		IAI47_14820	0.78	-0.9
3,124,920	+		IAI47_14820	0.78	+0.6
3,124,920	+		IAI47_14820	0.78	+1.0
3,124,920	+		IAI47_14820	0.78	-1.5
3,124,920	+		IAI47_14820	0.78	-2.0
3,124,920	+		IAI47_14820	0.78	+2.5
3,124,920	+		IAI47_14820	0.78	+3.2
3,124,921	-		IAI47_14820	0.79	-1.0
3,124,921	-		IAI47_14820	0.79	-3.0
3,124,921	-		IAI47_14820	0.79	-0.2
3,124,921	-		IAI47_14820	0.79	-2.0
3,124,921	-		IAI47_14820	0.79	-0.6
3,124,921	-		IAI47_14820	0.79	-1.4
3,124,987	+		IAI47_14820	0.87	+0.7
3,124,987	+		IAI47_14820	0.87	-1.2
3,124,988	-		IAI47_14820	0.87	-0.8
3,124,988	-		IAI47_14820	0.87	-2.0
3,125,057	+				-1.0
3,125,058	-				-1.4
3,125,092	+				-0.1
3,125,093	-				+0.9
3,125,093	-				+1.6
3,125,150	+				+0.9
3,125,176	+				-1.2
3,125,177	-				-2.0
3,125,192	+				-2.4
3,125,317	+		IAI47_14825	0.18	+1.2
3,125,317	+		IAI47_14825	0.18	+1.4
3,125,334	+		IAI47_14825	0.19	-0.3
3,125,410	+		IAI47_14825	0.25	+0.2
3,125,410	+		IAI47_14825	0.25	+0.0
3,125,410	+		IAI47_14825	0.25	-0.7
3,125,410	+		IAI47_14825	0.25	+0.4
3,125,410	+		IAI47_14825	0.25	+0.8
3,125,411	-		IAI47_14825	0.25	+0.9
3,125,411	-		IAI47_14825	0.25	-2.0
3,125,411	-		IAI47_14825	0.25	+1.2
3,125,411	-		IAI47_14825	0.25	-1.2
3,125,411	-		IAI47_14825	0.25	+1.6
3,125,411	-		IAI47_14825	0.25	-0.2
3,125,411	-		IAI47_14825	0.25	+0.0
3,125,504	+		IAI47_14825	0.33	-1.0
3,125,504	+		IAI47_14825	0.33	-1.2
3,125,504	+		IAI47_14825	0.33	-1.0
3,125,504	+		IAI47_14825	0.33	+3.6
3,125,504	+		IAI47_14825	0.33	-0.1
3,125,504	+		IAI47_14825	0.33	+0.3
3,125,504	+		IAI47_14825	0.33	-1.6
3,125,505	-		IAI47_14825	0.33	+1.0
3,125,730	+		IAI47_14825	0.51	-0.5
3,125,730	+		IAI47_14825	0.51	-0.8
3,125,730	+		IAI47_14825	0.51	-1.2
3,125,730	+		IAI47_14825	0.51	+0.1
3,125,730	+		IAI47_14825	0.51	+0.0
3,125,730	+		IAI47_14825	0.51	-0.8
3,125,730	+		IAI47_14825	0.51	+0.6
3,125,730	+		IAI47_14825	0.51	+3.3
3,125,734	+		IAI47_14825	0.51	-1.0
3,125,734	+		IAI47_14825	0.51	-0.5
3,125,734	+		IAI47_14825	0.51	-1.1
3,125,734	+		IAI47_14825	0.51	-0.4
3,125,735	-		IAI47_14825	0.51	-1.2
3,125,735	-		IAI47_14825	0.51	+0.9
3,125,735	-		IAI47_14825	0.51	-0.2
3,125,735	-		IAI47_14825	0.51	+0.3
3,125,735	-		IAI47_14825	0.51	+0.6
3,125,735	-		IAI47_14825	0.51	-2.0
3,125,735	-		IAI47_14825	0.51	-0.6
3,125,735	-		IAI47_14825	0.51	-0.7
3,125,740	+		IAI47_14825	0.51	+0.3
3,125,788	+		IAI47_14825	0.55	-0.2
3,125,788	+		IAI47_14825	0.55	+0.5
3,125,789	-		IAI47_14825	0.55	+0.2
3,125,789	-		IAI47_14825	0.55	-1.0
3,125,881	+		IAI47_14825	0.63	+0.7
3,125,882	-		IAI47_14825	0.63	+0.3
3,125,882	-		IAI47_14825	0.63	-0.4
3,125,898	+		IAI47_14825	0.64	-1.1
3,125,898	+		IAI47_14825	0.64	-0.2
3,125,899	-		IAI47_14825	0.64	-2.1
3,125,899	-		IAI47_14825	0.64	-0.4
3,125,905	+		IAI47_14825	0.64	-1.0
3,125,905	+		IAI47_14825	0.64	+1.0
3,125,930	+		IAI47_14825	0.66	-0.5
3,125,937	+		IAI47_14825	0.67	+0.5
3,125,938	-		IAI47_14825	0.67	-0.3
3,126,042	+		IAI47_14825	0.75	-0.1
3,126,042	+		IAI47_14825	0.75	-0.7
3,126,042	+		IAI47_14825	0.75	-3.2
3,126,043	-		IAI47_14825	0.75	-0.8
3,126,043	-		IAI47_14825	0.75	+0.4
3,126,043	-		IAI47_14825	0.75	-0.7
3,126,043	-		IAI47_14825	0.75	-1.7
3,126,043	-		IAI47_14825	0.75	+4.0
3,126,043	-		IAI47_14825	0.75	+0.3
3,126,054	-		IAI47_14825	0.76	+0.6
3,126,054	-		IAI47_14825	0.76	+0.6
3,126,054	-		IAI47_14825	0.76	-1.2
3,126,061	+		IAI47_14825	0.77	-0.1
3,126,148	+		IAI47_14825	0.84	-1.1
3,126,201	+		IAI47_14825	0.88	+0.2
3,126,202	-		IAI47_14825	0.88	-0.0
3,126,202	-		IAI47_14825	0.88	-0.5
3,126,212	+		IAI47_14825	0.89	+2.4
3,126,212	+		IAI47_14825	0.89	-0.3
3,126,213	-		IAI47_14825	0.89	-0.2
3,126,213	-		IAI47_14825	0.89	+3.0
3,126,215	+		IAI47_14825	0.89	-1.0
3,126,215	+		IAI47_14825	0.89	-0.4
3,126,215	+		IAI47_14825	0.89	+1.7
3,126,215	+		IAI47_14825	0.89	-0.3
3,126,215	+		IAI47_14825	0.89	+0.3
3,126,216	-		IAI47_14825	0.89	+0.8
3,126,216	-		IAI47_14825	0.89	-0.1
3,126,216	-		IAI47_14825	0.89	-0.1
3,126,216	-		IAI47_14825	0.89	-0.8
3,126,216	-		IAI47_14825	0.89	-0.5
3,126,249	+				-0.2
3,126,249	+				+0.3
3,126,250	-				-0.3
3,126,250	-				+0.0
3,126,250	-				+0.6
3,126,274	+				-0.8
3,126,342	-				+2.6
3,126,342	-				+0.8
3,126,342	-				-1.3
3,126,342	-				-1.6
3,126,342	-				-0.9
3,126,342	-				+0.1
3,126,361	+				+3.9
3,126,362	-				+2.0
3,126,396	-				+1.0
3,126,396	-				-1.5
3,126,398	+				-0.5
3,126,398	+				-0.4
3,126,399	-				+0.4
3,126,399	-				+1.8
3,126,399	-				-1.1
3,126,415	-				+1.0
3,126,434	+				+3.3
3,126,434	+				+0.2
3,126,435	-				+0.4
3,126,440	+				+0.7
3,126,441	-				+1.3
3,126,441	-				-0.5
3,126,458	-				+1.5
3,126,481	-				-0.2
3,126,485	+				-0.2
3,126,485	+				+1.3
3,126,486	-				+1.6
3,126,489	+				-0.4
3,126,490	-				-1.6
3,126,490	-				-0.8
3,126,490	-				-2.0
3,126,507	-				-2.9
3,126,510	-				-0.2
3,126,514	-				+0.0
3,126,562	+				+0.0
3,126,575	-				-0.3
3,126,578	-				-0.2
3,126,578	-				+1.0
3,126,594	+				-0.5
3,126,595	-				-0.5
3,126,595	-				+0.2
3,126,658	-				-1.7
3,126,692	+				+0.1
3,126,704	+				+0.7
3,126,734	-				-0.8
3,126,734	-				+0.9
3,126,734	-				-0.1
3,126,741	-				+0.2
3,126,741	-				+1.0
3,126,741	-				+0.6
3,126,741	-				-0.7
3,126,741	-				-0.7
3,126,751	+				+2.1
3,126,752	-				+0.4
3,126,783	+				-1.6
3,126,784	-				-0.2
3,126,784	-				+0.1
3,126,788	-				+1.9
3,126,788	-				+0.7
3,126,820	+				+2.6
3,126,820	+				+1.7
3,126,821	-				-0.3
3,126,821	-				-0.4
3,126,821	-				-0.8
3,126,821	-				+1.4
3,126,877	-				-1.4
3,126,877	-				+2.5
3,126,888	+				+0.4
3,126,888	+				-0.7
3,126,888	+				-0.8
3,126,888	+				+1.2
3,126,888	+				+1.5
3,126,889	-				-1.6
3,126,889	-				+2.7
3,126,890	+				-0.8
3,126,891	-				+1.2
3,126,904	+				-0.8
3,126,904	+				+1.6
3,126,904	+				-0.5
3,126,905	-				-1.1
3,126,911	-				-1.1
3,126,911	-				+0.5
3,126,921	+				-0.6
3,126,921	+				-1.5
3,126,929	+				+0.4
3,126,929	+				+0.6
3,126,929	+				+1.1
3,126,929	+				-1.5
3,126,929	+				-0.2
3,126,930	-				-0.8
3,126,930	-				-0.0
3,126,930	-				-0.7
3,126,930	-				+2.2
3,126,930	-				+2.4
3,126,930	-				-0.0
3,126,939	+				-1.3
3,126,940	-				+0.3
3,126,956	+				+1.0
3,127,041	+		IAI47_14830	0.13	-0.2
3,127,042	-		IAI47_14830	0.13	+0.3
3,127,042	-		IAI47_14830	0.13	-0.5
3,127,042	-		IAI47_14830	0.13	-1.1
3,127,042	-		IAI47_14830	0.13	+1.0
3,127,111	+		IAI47_14830	0.18	+1.0
3,127,111	+		IAI47_14830	0.18	+1.7
3,127,111	+		IAI47_14830	0.18	+0.6
3,127,111	+		IAI47_14830	0.18	-0.3
3,127,111	+		IAI47_14830	0.18	+0.3
3,127,112	-		IAI47_14830	0.18	+1.1
3,127,112	-		IAI47_14830	0.18	-1.7
3,127,112	-		IAI47_14830	0.18	-1.3
3,127,112	-		IAI47_14830	0.18	+0.7
3,127,169	+		IAI47_14830	0.22	-0.7
3,127,169	+		IAI47_14830	0.22	-0.4
3,127,169	+		IAI47_14830	0.22	-0.6
3,127,170	-		IAI47_14830	0.23	+0.2
3,127,170	-		IAI47_14830	0.23	-0.8
3,127,170	-		IAI47_14830	0.23	-0.3
3,127,170	-		IAI47_14830	0.23	-1.1
3,127,170	-		IAI47_14830	0.23	+2.0
3,127,178	+		IAI47_14830	0.23	-3.1
3,127,178	+		IAI47_14830	0.23	+0.1
3,127,178	+		IAI47_14830	0.23	+0.5
3,127,179	-		IAI47_14830	0.23	+0.5
3,127,251	+		IAI47_14830	0.29	+0.6
3,127,252	-		IAI47_14830	0.29	-0.3
3,127,252	-		IAI47_14830	0.29	-0.2
3,127,252	-		IAI47_14830	0.29	+0.2
3,127,260	+		IAI47_14830	0.29	-1.0
3,127,261	-		IAI47_14830	0.29	+0.2
3,127,323	+		IAI47_14830	0.34	+0.2
3,127,324	-		IAI47_14830	0.34	+0.3