Strain Fitness in Pantoea sp. MT58 around IAI47_14160

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,992,406	+		IAI47_14150	0.62	+0.7
2,992,508	+		IAI47_14150	0.71	+1.0
2,992,508	+		IAI47_14150	0.71	+0.9
2,992,508	+		IAI47_14150	0.71	-0.4
2,992,508	+		IAI47_14150	0.71	+1.1
2,992,509	-		IAI47_14150	0.71	-0.4
2,992,509	-		IAI47_14150	0.71	-1.2
2,992,509	-		IAI47_14150	0.71	+0.7
2,992,554	+		IAI47_14150	0.74	+1.1
2,992,554	+		IAI47_14150	0.74	-1.9
2,992,554	+		IAI47_14150	0.74	-0.6
2,992,554	+		IAI47_14150	0.74	-0.6
2,992,554	+		IAI47_14150	0.74	-1.3
2,992,554	+		IAI47_14150	0.74	-2.4
2,992,555	-		IAI47_14150	0.74	-0.7
2,992,555	-		IAI47_14150	0.74	+0.5
2,992,555	-		IAI47_14150	0.74	+2.2
2,992,555	-		IAI47_14150	0.74	-1.5
2,992,555	-		IAI47_14150	0.74	-0.9
2,992,555	-		IAI47_14150	0.74	+0.9
2,992,555	-		IAI47_14150	0.74	-1.8
2,992,556	+		IAI47_14150	0.74	-1.4
2,992,556	+		IAI47_14150	0.74	-1.2
2,992,556	+		IAI47_14150	0.74	-0.3
2,992,556	+		IAI47_14150	0.74	-2.0
2,992,556	+		IAI47_14150	0.74	-2.8
2,992,556	+		IAI47_14150	0.74	-0.4
2,992,557	-		IAI47_14150	0.75	-0.6
2,992,557	-		IAI47_14150	0.75	-0.9
2,992,557	-		IAI47_14150	0.75	-0.6
2,992,557	-		IAI47_14150	0.75	+1.7
2,992,557	-		IAI47_14150	0.75	-1.9
2,992,557	-		IAI47_14150	0.75	-0.2
2,992,557	-		IAI47_14150	0.75	-0.5
2,992,593	+		IAI47_14150	0.77	-1.2
2,992,602	-		IAI47_14150	0.78	+1.5
2,992,640	+		IAI47_14150	0.81	+0.2
2,992,685	+		IAI47_14150	0.85	+1.2
2,992,686	-		IAI47_14150	0.85	-0.1
2,992,938	+				+0.9
2,992,939	-				+0.9
2,992,985	-		IAI47_14155	0.15	+2.0
2,993,036	-		IAI47_14155	0.31	-0.5
2,993,036	-		IAI47_14155	0.31	-0.6
2,993,161	+		IAI47_14155	0.70	+2.1
2,993,162	-		IAI47_14155	0.71	+1.6
2,993,188	+		IAI47_14155	0.79	-0.8
2,993,188	+		IAI47_14155	0.79	+1.0
2,993,188	+		IAI47_14155	0.79	-0.9
2,993,189	-		IAI47_14155	0.79	-0.9
2,993,189	-		IAI47_14155	0.79	+3.2
2,993,189	-		IAI47_14155	0.79	-2.2
2,993,189	-		IAI47_14155	0.79	+0.1
2,993,191	+		IAI47_14155	0.80	-1.3
2,993,191	+		IAI47_14155	0.80	-0.6
2,993,191	+		IAI47_14155	0.80	+0.6
2,993,191	+		IAI47_14155	0.80	+0.1
2,993,191	+		IAI47_14155	0.80	-1.2
2,993,191	+		IAI47_14155	0.80	-0.9
2,993,192	-				-0.1
2,993,192	-		IAI47_14155	0.80	-0.7
2,993,192	-		IAI47_14155	0.80	-0.4
2,993,192	-		IAI47_14155	0.80	-1.3
2,993,192	-		IAI47_14155	0.80	+2.7
2,993,192	-		IAI47_14155	0.80	-0.3
2,993,194	+		IAI47_14155	0.81	+0.7
2,993,194	+		IAI47_14155	0.81	-1.9
2,993,195	-		IAI47_14155	0.81	+0.5
2,993,195	-		IAI47_14155	0.81	+0.4
2,993,195	-		IAI47_14155	0.81	+1.3
2,993,195	-		IAI47_14155	0.81	-2.2
2,993,195	-		IAI47_14155	0.81	+0.8
2,993,195	-		IAI47_14155	0.81	-2.5
2,993,195	-		IAI47_14155	0.81	-1.9
2,993,195	-		IAI47_14155	0.81	+1.7
2,993,195	-		IAI47_14155	0.81	-2.4
2,993,205	-		IAI47_14155	0.84	-1.4
2,993,224	+				+0.1
2,993,225	-				-1.6
2,993,225	-				-0.6
2,993,239	+				+0.9
2,993,239	+				-0.3
2,993,239	+				+1.4
2,993,239	+				+0.7
2,993,254	+				-0.3
2,993,255	-				-0.3
2,993,266	+				-0.3
2,993,266	+				-0.3
2,993,267	-				+0.4
2,993,267	-				+1.1
2,993,267	-				-1.9
2,993,267	-				+0.5
2,993,283	+				-1.7
2,993,291	-				-0.9
2,993,291	-				-0.2
2,993,291	-				+0.1
2,993,291	-				-0.2
2,993,301	+				+2.4
2,993,301	+				+1.8
2,993,302	-				+0.7
2,993,322	-				+1.4
2,993,322	-				+2.4
2,993,327	+				+0.2
2,993,328	-				+0.3
2,993,328	-				-1.5
2,993,394	+				+0.4
2,993,395	-				+0.1
2,993,495	+		IAI47_14160	0.24	+1.4
2,993,496	-		IAI47_14160	0.24	-1.4
2,993,504	+		IAI47_14160	0.26	-0.7
2,993,511	+		IAI47_14160	0.28	-2.0
2,993,511	+		IAI47_14160	0.28	-0.0
2,993,511	+		IAI47_14160	0.28	+1.3
2,993,511	+		IAI47_14160	0.28	-1.8
2,993,512	-		IAI47_14160	0.28	-1.3
2,993,512	-		IAI47_14160	0.28	-0.4
2,993,512	-		IAI47_14160	0.28	+0.0
2,993,552	-		IAI47_14160	0.37	+0.3
2,993,564	-		IAI47_14160	0.40	+1.1
2,993,564	-		IAI47_14160	0.40	-0.9
2,993,564	-		IAI47_14160	0.40	-0.3
2,993,564	-		IAI47_14160	0.40	+0.8
2,993,733	+		IAI47_14160	0.80	+0.5
2,993,734	-		IAI47_14160	0.80	+0.5
2,993,734	-		IAI47_14160	0.80	-0.6
2,993,734	-		IAI47_14160	0.80	+0.9
2,993,739	+		IAI47_14160	0.81	-0.1
2,993,739	+		IAI47_14160	0.81	+3.7
2,993,739	+		IAI47_14160	0.81	+0.8
2,993,739	+		IAI47_14160	0.81	-1.1
2,993,821	+				-0.2
2,993,821	+				+1.1
2,993,821	+				+1.3
2,993,821	+				+1.1
2,993,822	-				+0.4
2,993,822	-				+2.0
2,993,822	-				+0.7
2,993,822	-				-0.5
2,993,822	-				+1.5
2,993,822	-				+0.6
2,993,822	-				-0.3
2,993,822	-				+0.3
2,993,824	+				+0.0
2,993,824	+				-1.4
2,993,824	+				-0.8
2,993,824	+				-0.0
2,993,825	-				+0.4
2,993,825	-				+0.5
2,993,837	+				-0.5
2,993,837	+				+1.2
2,993,837	+				+0.3
2,993,837	+				+1.8
2,993,837	+				+2.0
2,993,838	-				+0.2
2,993,838	-				+1.9
2,993,838	-				-1.9
2,993,838	-				+1.9
2,993,841	+				+0.0
2,993,841	+				-0.5
2,993,841	+				-0.6
2,993,841	+				+1.5
2,993,841	+				-1.2
2,993,842	-				-0.7
2,993,842	-				-1.8
2,993,842	-				-0.9
2,993,842	-				-0.5
2,993,842	-				+0.3
2,993,855	+				+0.7
2,993,855	+				+0.2
2,993,855	+				+0.2
2,993,856	-				+1.6
2,993,856	-				-0.8
2,993,856	-				-2.0
2,993,856	-				-1.4
2,993,856	-				+1.1
2,993,930	+		IAI47_14165	0.37	-0.7
2,993,930	+		IAI47_14165	0.37	-1.5
2,993,930	+		IAI47_14165	0.37	-1.2
2,993,930	+		IAI47_14165	0.37	+0.2
2,993,930	+		IAI47_14165	0.37	+1.3
2,993,930	+		IAI47_14165	0.37	-0.0
2,993,930	+		IAI47_14165	0.37	+1.0
2,993,930	+		IAI47_14165	0.37	+1.7
2,993,930	+		IAI47_14165	0.37	-0.5
2,993,930	+		IAI47_14165	0.37	+0.1
2,993,930	+		IAI47_14165	0.37	+0.3
2,993,931	-		IAI47_14165	0.37	-0.3
2,993,931	-		IAI47_14165	0.37	+2.6
2,993,931	-		IAI47_14165	0.37	+1.6
2,993,931	-		IAI47_14165	0.37	-0.0
2,993,931	-		IAI47_14165	0.37	+1.0
2,993,953	-		IAI47_14165	0.45	-0.5
2,993,958	+		IAI47_14165	0.47	-0.3
2,993,958	+		IAI47_14165	0.47	+0.1
2,993,958	+		IAI47_14165	0.47	+0.5
2,993,958	+		IAI47_14165	0.47	+1.9
2,993,959	-		IAI47_14165	0.47	-1.0
2,993,959	-		IAI47_14165	0.47	-1.7
2,993,959	-		IAI47_14165	0.47	+1.6
2,994,012	+		IAI47_14165	0.67	-1.6
2,994,130	+				+1.3
2,994,130	+				+1.2
2,994,130	+				-0.2
2,994,131	-				-0.7
2,994,131	-				+2.5
2,994,131	-				+0.1
2,994,139	+				+1.9
2,994,139	+				-1.7
2,994,139	+				-0.8
2,994,140	-				-0.3
2,994,140	-				+1.1
2,994,140	-				-2.2
2,994,150	+				-1.2
2,994,151	-				+0.1
2,994,151	-				-2.0
2,994,156	+				-0.3
2,994,157	-				-0.0
2,994,157	-				+0.7
2,994,157	-				-0.7
2,994,157	-				-0.2
2,994,157	-				+1.6
2,994,160	+				+2.4
2,994,160	+				-0.6
2,994,160	+				+0.6
2,994,160	+				+0.1
2,994,161	-				-0.1
2,994,178	-				-0.3
2,994,181	+				+3.4
2,994,181	+				+0.4
2,994,181	+				-2.1
2,994,182	-				-0.5
2,994,182	-				-2.2
2,994,182	-				-0.1
2,994,182	-				-1.6
2,994,237	+				-1.1
2,994,237	+				-0.1
2,994,238	-				-1.6
2,994,238	-				+0.1
2,994,238	-				-0.4
2,994,238	-				+1.7
2,994,238	-				-0.0
2,994,238	-				+4.2
2,994,238	-				+0.6
2,994,298	+				+0.0
2,994,299	-				+0.3
2,994,309	-				+2.0
2,994,312	+				+3.2
2,994,312	+				-1.7
2,994,313	-				+0.2
2,994,318	+				+0.1
2,994,380	+				+3.6
2,994,380	+				+1.3
2,994,380	+				+2.0
2,994,380	+				-0.1
2,994,380	+				+1.1
2,994,380	+				+0.8
2,994,381	-				-1.2
2,994,381	-				+1.0
2,994,436	-				+0.0
2,994,436	-				+0.6
2,994,436	-				+2.2
2,994,436	-				-0.7
2,994,436	-				+1.6
2,994,448	+				-0.1
2,994,448	+				-0.6
2,994,449	-				-0.3
2,994,449	-				+0.3
2,994,468	+				+0.6
2,994,468	+				+0.6
2,994,468	+				-0.3
2,994,469	-				-1.5
2,994,489	+				-1.2
2,994,489	+				+1.0
2,994,489	+				-0.2
2,994,489	+				-0.5
2,994,489	+				-0.7
2,994,489	+				+1.6
2,994,490	-				+1.0
2,994,490	-				+0.4
2,994,490	-				+0.8
2,994,490	-				+0.2
2,994,512	-				-0.9
2,994,512	-				-1.1
2,994,538	+				-0.8
2,994,578	+				-1.7
2,994,579	-				+2.5
2,994,579	-				+0.8
2,994,579	-				+0.3
2,994,606	-		IAI47_14170	0.12	-0.4
2,994,612	+		IAI47_14170	0.15	-0.5
2,994,612	+		IAI47_14170	0.15	-0.4
2,994,613	-		IAI47_14170	0.15	+0.5
2,994,613	-		IAI47_14170	0.15	+1.9
2,994,712	+		IAI47_14170	0.58	+0.9
2,994,714	+		IAI47_14170	0.59	+1.1
2,994,715	-		IAI47_14170	0.59	-2.1
2,994,783	-		IAI47_14170	0.88	-2.1
2,994,783	-		IAI47_14170	0.88	+1.3
2,994,789	+				-0.7
2,994,789	+				+0.1
2,994,789	+				-1.0
2,994,789	+				+0.4
2,994,789	+				-1.6
2,994,790	-				+0.5
2,994,790	-				-0.9
2,994,790	-				+0.9
2,994,790	-				-1.8
2,994,790	-				+0.6
2,994,790	-				+0.6
2,994,799	-				+0.0
2,994,813	+				+0.5
2,994,814	-				+1.7