Strain Fitness in Pantoea sp. MT58 around IAI47_12025

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,545,756	+		IAI47_12020	0.43	+0.7
2,545,766	+		IAI47_12020	0.44	+2.1
2,545,766	+		IAI47_12020	0.44	+0.5
2,545,766	+		IAI47_12020	0.44	+0.4
2,545,767	-		IAI47_12020	0.44	+2.1
2,545,767	-		IAI47_12020	0.44	+1.6
2,545,767	-		IAI47_12020	0.44	+0.7
2,545,788	+		IAI47_12020	0.45	+3.4
2,545,788	+		IAI47_12020	0.45	+0.7
2,545,788	+		IAI47_12020	0.45	+0.8
2,545,788	+		IAI47_12020	0.45	-0.5
2,545,788	+		IAI47_12020	0.45	+0.3
2,545,788	+		IAI47_12020	0.45	-0.2
2,545,788	+		IAI47_12020	0.45	-3.2
2,545,788	+		IAI47_12020	0.45	-1.1
2,545,788	+		IAI47_12020	0.45	+1.3
2,545,789	-		IAI47_12020	0.45	-0.3
2,545,789	-		IAI47_12020	0.45	-0.1
2,545,789	-		IAI47_12020	0.45	-1.2
2,545,789	-		IAI47_12020	0.45	-1.5
2,545,792	+		IAI47_12020	0.45	-2.0
2,545,793	-		IAI47_12020	0.45	-0.3
2,545,793	-		IAI47_12020	0.45	-0.0
2,545,793	-		IAI47_12020	0.45	+0.4
2,545,793	-		IAI47_12020	0.45	-1.3
2,545,793	-		IAI47_12020	0.45	+0.1
2,545,798	+		IAI47_12020	0.46	-0.9
2,545,798	+		IAI47_12020	0.46	+1.0
2,545,823	+		IAI47_12020	0.47	+0.8
2,545,823	+		IAI47_12020	0.47	-0.1
2,545,824	-		IAI47_12020	0.47	+0.0
2,545,824	-		IAI47_12020	0.47	+1.0
2,545,824	-		IAI47_12020	0.47	+0.1
2,545,824	-		IAI47_12020	0.47	+0.4
2,545,824	-		IAI47_12020	0.47	+4.0
2,545,824	-		IAI47_12020	0.47	-1.3
2,545,824	-		IAI47_12020	0.47	+1.0
2,545,835	+		IAI47_12020	0.48	+0.0
2,545,835	+		IAI47_12020	0.48	-0.4
2,545,835	+		IAI47_12020	0.48	-0.9
2,545,836	-		IAI47_12020	0.48	-1.4
2,545,837	+		IAI47_12020	0.48	+1.1
2,545,837	+		IAI47_12020	0.48	-0.3
2,545,838	-		IAI47_12020	0.48	-0.3
2,545,838	-		IAI47_12020	0.48	+0.2
2,545,856	-		IAI47_12020	0.49	+1.1
2,545,867	+		IAI47_12020	0.50	+1.1
2,545,867	+		IAI47_12020	0.50	+2.8
2,545,868	-		IAI47_12020	0.50	-0.8
2,545,868	-		IAI47_12020	0.50	-0.7
2,545,868	-		IAI47_12020	0.50	+2.1
2,545,868	-		IAI47_12020	0.50	+3.0
2,545,868	-		IAI47_12020	0.50	+1.0
2,545,874	+		IAI47_12020	0.50	+0.6
2,545,874	+		IAI47_12020	0.50	+1.3
2,545,874	+		IAI47_12020	0.50	+1.5
2,545,874	+		IAI47_12020	0.50	+0.4
2,545,874	+		IAI47_12020	0.50	-1.5
2,545,874	+		IAI47_12020	0.50	+1.5
2,545,874	+		IAI47_12020	0.50	-0.0
2,545,874	+		IAI47_12020	0.50	-0.2
2,545,874	+		IAI47_12020	0.50	-0.4
2,545,874	+		IAI47_12020	0.50	-0.9
2,545,875	-		IAI47_12020	0.51	-0.8
2,545,875	-		IAI47_12020	0.51	+1.0
2,545,978	+		IAI47_12020	0.57	-0.1
2,545,978	+		IAI47_12020	0.57	+0.5
2,545,979	-		IAI47_12020	0.57	-0.3
2,545,979	-		IAI47_12020	0.57	-1.9
2,546,003	+		IAI47_12020	0.59	+0.3
2,546,004	-		IAI47_12020	0.59	+1.7
2,546,020	-		IAI47_12020	0.60	+0.4
2,546,020	-		IAI47_12020	0.60	+0.0
2,546,045	+		IAI47_12020	0.61	+2.0
2,546,045	+		IAI47_12020	0.61	+0.1
2,546,045	+		IAI47_12020	0.61	+1.9
2,546,046	-		IAI47_12020	0.61	-1.3
2,546,046	-		IAI47_12020	0.61	-0.8
2,546,046	-		IAI47_12020	0.61	+1.0
2,546,046	-		IAI47_12020	0.61	+0.1
2,546,138	+		IAI47_12020	0.67	+2.1
2,546,138	+		IAI47_12020	0.67	+1.8
2,546,138	+		IAI47_12020	0.67	+0.9
2,546,138	+		IAI47_12020	0.67	-0.6
2,546,138	+		IAI47_12020	0.67	+0.8
2,546,138	+		IAI47_12020	0.67	+1.0
2,546,138	+		IAI47_12020	0.67	+0.4
2,546,138	+		IAI47_12020	0.67	+0.6
2,546,138	+		IAI47_12020	0.67	+0.6
2,546,138	+		IAI47_12020	0.67	+2.0
2,546,139	-		IAI47_12020	0.67	+0.5
2,546,139	-		IAI47_12020	0.67	-0.4
2,546,139	-		IAI47_12020	0.67	+0.1
2,546,139	-		IAI47_12020	0.67	-1.1
2,546,139	-		IAI47_12020	0.67	-1.0
2,546,139	-		IAI47_12020	0.67	-1.9
2,546,156	+		IAI47_12020	0.68	+0.7
2,546,156	+		IAI47_12020	0.68	+3.9
2,546,156	+		IAI47_12020	0.68	+0.2
2,546,156	+		IAI47_12020	0.68	+0.1
2,546,156	+		IAI47_12020	0.68	+0.5
2,546,156	+		IAI47_12020	0.68	+0.5
2,546,156	+		IAI47_12020	0.68	+1.1
2,546,156	+		IAI47_12020	0.68	+0.7
2,546,157	-		IAI47_12020	0.68	-1.2
2,546,157	-		IAI47_12020	0.68	+0.1
2,546,157	-		IAI47_12020	0.68	+1.7
2,546,157	-		IAI47_12020	0.68	-0.1
2,546,157	-		IAI47_12020	0.68	+0.2
2,546,157	-		IAI47_12020	0.68	-0.1
2,546,157	-		IAI47_12020	0.68	+1.0
2,546,157	-		IAI47_12020	0.68	-0.9
2,546,157	-		IAI47_12020	0.68	-0.1
2,546,162	+		IAI47_12020	0.68	+0.2
2,546,162	+		IAI47_12020	0.68	-0.5
2,546,162	+		IAI47_12020	0.68	-2.2
2,546,162	+		IAI47_12020	0.68	+0.2
2,546,162	+		IAI47_12020	0.68	+4.7
2,546,162	+		IAI47_12020	0.68	+0.6
2,546,162	+		IAI47_12020	0.68	+2.2
2,546,162	+		IAI47_12020	0.68	-0.6
2,546,162	+		IAI47_12020	0.68	+0.2
2,546,162	+		IAI47_12020	0.68	-1.5
2,546,162	+		IAI47_12020	0.68	+0.5
2,546,163	-		IAI47_12020	0.69	+1.9
2,546,163	-		IAI47_12020	0.69	+1.6
2,546,163	-		IAI47_12020	0.69	-1.9
2,546,163	-		IAI47_12020	0.69	+0.4
2,546,163	-		IAI47_12020	0.69	+2.2
2,546,163	-		IAI47_12020	0.69	+0.5
2,546,163	-		IAI47_12020	0.69	-0.7
2,546,163	-		IAI47_12020	0.69	-1.9
2,546,163	-		IAI47_12020	0.69	-1.0
2,546,163	-		IAI47_12020	0.69	-1.9
2,546,211	+		IAI47_12020	0.72	-0.4
2,546,211	+		IAI47_12020	0.72	+0.0
2,546,212	-		IAI47_12020	0.72	-0.2
2,546,212	-		IAI47_12020	0.72	-1.2
2,546,239	+		IAI47_12020	0.73	+1.5
2,546,240	-		IAI47_12020	0.73	-2.2
2,546,301	+		IAI47_12020	0.77	+0.7
2,546,301	+		IAI47_12020	0.77	+0.0
2,546,301	+		IAI47_12020	0.77	-0.6
2,546,301	+		IAI47_12020	0.77	-0.9
2,546,301	+		IAI47_12020	0.77	+0.1
2,546,302	-		IAI47_12020	0.77	-0.5
2,546,302	-		IAI47_12020	0.77	-1.0
2,546,302	-		IAI47_12020	0.77	-0.2
2,546,302	-		IAI47_12020	0.77	+0.3
2,546,341	+		IAI47_12020	0.80	+0.7
2,546,341	+		IAI47_12020	0.80	-1.5
2,546,341	+		IAI47_12020	0.80	+0.4
2,546,341	+		IAI47_12020	0.80	-1.8
2,546,342	-		IAI47_12020	0.80	-0.2
2,546,342	-		IAI47_12020	0.80	+0.5
2,546,342	-		IAI47_12020	0.80	-0.8
2,546,392	+		IAI47_12020	0.83	+0.6
2,546,393	-		IAI47_12020	0.83	-0.2
2,546,393	-		IAI47_12020	0.83	+0.2
2,546,393	-		IAI47_12020	0.83	+2.1
2,546,393	-		IAI47_12020	0.83	+1.0
2,546,476	+		IAI47_12020	0.88	+0.1
2,546,541	-				-1.4
2,546,557	+				-0.9
2,546,557	+				+0.6
2,546,560	+				-0.2
2,546,560	+				-0.4
2,546,560	+				-1.3
2,546,561	-				-0.7
2,546,561	-				-0.1
2,546,561	-				-2.9
2,546,561	-				-1.2
2,546,561	-				-0.3
2,546,609	-				-2.3
2,546,609	-				+0.4
2,546,623	-				-0.3
2,546,625	+				+3.2
2,546,625	+				+1.1
2,546,637	+				-1.2
2,546,637	+				+1.4
2,546,649	+				+2.6
2,546,649	+				+1.4
2,546,649	+				+0.3
2,546,650	-				-0.1
2,546,663	+				-0.1
2,546,663	+				+0.1
2,546,663	+				+0.5
2,546,663	+				-1.1
2,546,663	+				-0.6
2,546,664	-				+0.8
2,546,664	-				-0.8
2,546,664	-				+1.4
2,546,676	+				+1.2
2,546,676	+				-1.1
2,546,676	+				+2.0
2,546,677	-				+1.4
2,546,677	-				-0.7
2,546,700	+				+0.1
2,546,700	+				-0.2
2,546,700	+				-0.3
2,546,700	+				+0.3
2,546,700	+				-0.1
2,546,700	+				-0.8
2,546,700	+				-0.3
2,546,701	-				-1.7
2,546,701	-				-0.0
2,546,717	+				+0.4
2,546,717	+				+0.4
2,546,717	+				+1.0
2,546,718	-				-0.8
2,546,779	+				-2.3
2,546,806	-		IAI47_12025	0.12	-1.2
2,546,836	+		IAI47_12025	0.15	-0.4
2,546,836	+		IAI47_12025	0.15	+0.0
2,546,836	+		IAI47_12025	0.15	-1.3
2,546,836	+		IAI47_12025	0.15	-0.4
2,546,836	+		IAI47_12025	0.15	-0.2
2,546,837	-		IAI47_12025	0.15	-0.9
2,546,837	-		IAI47_12025	0.15	+0.4
2,546,840	-		IAI47_12025	0.15	+1.4
2,546,840	-		IAI47_12025	0.15	-2.0
2,546,840	-		IAI47_12025	0.15	-0.9
2,546,883	-		IAI47_12025	0.19	-1.7
2,546,897	+		IAI47_12025	0.20	+0.5
2,546,897	+		IAI47_12025	0.20	+1.1
2,546,897	+		IAI47_12025	0.20	-0.3
2,546,897	+		IAI47_12025	0.20	+0.7
2,546,897	+		IAI47_12025	0.20	+0.1
2,546,898	-		IAI47_12025	0.20	-2.2
2,546,898	-		IAI47_12025	0.20	+0.5
2,546,898	-		IAI47_12025	0.20	+2.3
2,546,900	+		IAI47_12025	0.20	-0.3
2,546,900	+		IAI47_12025	0.20	+0.0
2,546,900	+		IAI47_12025	0.20	-0.5
2,546,900	+		IAI47_12025	0.20	-0.4
2,546,900	+		IAI47_12025	0.20	-0.2
2,546,900	+		IAI47_12025	0.20	-1.0
2,546,901	-		IAI47_12025	0.20	+0.8
2,546,901	-		IAI47_12025	0.20	-0.1
2,546,901	-		IAI47_12025	0.20	+0.4
2,546,901	-		IAI47_12025	0.20	-0.3
2,546,901	-		IAI47_12025	0.20	+1.5
2,546,951	-		IAI47_12025	0.25	+0.2
2,546,992	+		IAI47_12025	0.28	-0.4
2,546,993	-		IAI47_12025	0.28	+1.4
2,547,026	+		IAI47_12025	0.31	+2.1
2,547,089	+		IAI47_12025	0.37	+0.7
2,547,089	+		IAI47_12025	0.37	+0.7
2,547,089	+		IAI47_12025	0.37	-0.5
2,547,089	+		IAI47_12025	0.37	-1.1
2,547,089	+		IAI47_12025	0.37	+2.2
2,547,089	+		IAI47_12025	0.37	+0.1
2,547,089	+		IAI47_12025	0.37	-0.4
2,547,090	-		IAI47_12025	0.37	+0.0
2,547,090	-		IAI47_12025	0.37	+0.3
2,547,090	-		IAI47_12025	0.37	-2.2
2,547,090	-		IAI47_12025	0.37	-1.4
2,547,103	+		IAI47_12025	0.38	+0.1
2,547,104	-		IAI47_12025	0.38	-1.9
2,547,127	+		IAI47_12025	0.40	+0.4
2,547,127	+		IAI47_12025	0.40	-1.0
2,547,127	+		IAI47_12025	0.40	+2.0
2,547,127	+		IAI47_12025	0.40	+0.4
2,547,127	+		IAI47_12025	0.40	-0.6
2,547,127	+		IAI47_12025	0.40	+0.0
2,547,127	+		IAI47_12025	0.40	+0.5
2,547,127	+		IAI47_12025	0.40	+2.1
2,547,127	+		IAI47_12025	0.40	+1.7
2,547,127	+		IAI47_12025	0.40	+0.4
2,547,127	+		IAI47_12025	0.40	+1.0
2,547,128	-		IAI47_12025	0.40	+1.1
2,547,128	-		IAI47_12025	0.40	-0.3
2,547,128	-		IAI47_12025	0.40	+3.3
2,547,128	-		IAI47_12025	0.40	-0.5
2,547,128	-		IAI47_12025	0.40	-1.5
2,547,134	+		IAI47_12025	0.41	+0.4
2,547,135	-		IAI47_12025	0.41	-0.2
2,547,170	-		IAI47_12025	0.44	+0.3
2,547,170	-		IAI47_12025	0.44	-0.6
2,547,186	+		IAI47_12025	0.45	-0.8
2,547,187	-		IAI47_12025	0.45	-1.2
2,547,297	+		IAI47_12025	0.55	+2.0
2,547,297	+		IAI47_12025	0.55	-0.3
2,547,533	+		IAI47_12025	0.76	+0.0
2,547,533	+		IAI47_12025	0.76	+0.1
2,547,534	-		IAI47_12025	0.76	-0.6
2,547,534	-		IAI47_12025	0.76	-0.8
2,547,596	+		IAI47_12025	0.81	+1.2
2,547,596	+		IAI47_12025	0.81	+1.0
2,547,645	+		IAI47_12025	0.86	+0.1
2,547,646	-		IAI47_12025	0.86	+0.5
2,547,656	-		IAI47_12025	0.87	-0.3
2,547,656	-		IAI47_12025	0.87	-0.2
2,547,656	-		IAI47_12025	0.87	-0.1
2,547,656	-		IAI47_12025	0.87	-0.2
2,547,719	+				+2.0
2,547,720	-				+0.8
2,547,720	-				-0.4
2,547,720	-				-0.5
2,547,720	-				+0.7
2,547,722	+				+0.7
2,547,752	+				+0.7
2,547,753	-				-0.2
2,547,788	+				-1.8
2,547,789	-				-0.3
2,547,789	-				+1.0
2,547,789	-				-1.5
2,547,789	-				+0.5
2,547,800	+				+0.5
2,547,800	+				-0.2
2,547,800	+				+0.9
2,547,855	+				-0.5
2,547,855	+				-1.3
2,547,855	+				-0.3
2,547,856	-				+3.1
2,547,860	+				-1.5
2,547,862	+				-0.8
2,547,862	+				-0.1
2,547,862	+				-1.7
2,547,863	-				-1.0
2,547,863	-				+2.3
2,547,877	+				+0.2
2,547,877	+				-1.2
2,547,877	+				-0.3
2,547,878	-				+0.9
2,547,878	-				+2.1
2,547,878	-				-1.9
2,547,878	-				+0.0
2,547,878	-				+2.0
2,547,878	-				+0.2
2,547,878	-				-0.1
2,547,931	-				-0.9
2,548,000	-				+0.5
2,548,000	-				+1.9
2,548,021	-		IAI47_12030	0.11	+0.1
2,548,021	-		IAI47_12030	0.11	+0.5
2,548,021	-		IAI47_12030	0.11	+0.1
2,548,031	+		IAI47_12030	0.12	+3.7
2,548,031	+		IAI47_12030	0.12	+1.3
2,548,032	-		IAI47_12030	0.12	-0.3
2,548,061	+		IAI47_12030	0.14	+0.7
2,548,062	-		IAI47_12030	0.14	+0.7
2,548,062	-		IAI47_12030	0.14	-3.1
2,548,078	-		IAI47_12030	0.15	-1.5
2,548,078	-		IAI47_12030	0.15	-0.9
2,548,112	+		IAI47_12030	0.17	+0.0
2,548,112	+		IAI47_12030	0.17	-2.0
2,548,112	+		IAI47_12030	0.17	-2.0
2,548,113	-		IAI47_12030	0.18	+1.2
2,548,185	+		IAI47_12030	0.23	+0.4
2,548,192	+		IAI47_12030	0.23	-1.0
2,548,192	+		IAI47_12030	0.23	-1.5
2,548,193	-		IAI47_12030	0.23	-1.4
2,548,193	-		IAI47_12030	0.23	-0.5
2,548,195	+		IAI47_12030	0.23	+2.4
2,548,195	-		IAI47_12030	0.23	+1.1
2,548,196	-		IAI47_12030	0.23	+0.2
2,548,196	-		IAI47_12030	0.23	+2.7
2,548,207	+		IAI47_12030	0.24	+0.0
2,548,207	+		IAI47_12030	0.24	-0.5
2,548,207	+		IAI47_12030	0.24	+0.7
2,548,207	+		IAI47_12030	0.24	-1.4
2,548,207	+		IAI47_12030	0.24	-1.1
2,548,208	-		IAI47_12030	0.24	+0.1
2,548,208	-		IAI47_12030	0.24	+0.4
2,548,208	-		IAI47_12030	0.24	-0.0
2,548,208	-		IAI47_12030	0.24	-1.3
2,548,208	-		IAI47_12030	0.24	-1.1
2,548,319	+		IAI47_12030	0.32	-1.5
2,548,320	-		IAI47_12030	0.32	+1.4
2,548,363	+		IAI47_12030	0.35	+0.0
2,548,363	+		IAI47_12030	0.35	-0.3
2,548,363	+		IAI47_12030	0.35	-1.3
2,548,363	+		IAI47_12030	0.35	+0.4
2,548,363	+		IAI47_12030	0.35	+0.7
2,548,363	+		IAI47_12030	0.35	-0.2
2,548,363	+		IAI47_12030	0.35	-1.6
2,548,363	+		IAI47_12030	0.35	+1.5
2,548,363	+		IAI47_12030	0.35	+1.2
2,548,364	-		IAI47_12030	0.35	-1.2
2,548,364	-		IAI47_12030	0.35	-0.8
2,548,364	-		IAI47_12030	0.35	+0.0
2,548,364	-		IAI47_12030	0.35	+0.6
2,548,496	+		IAI47_12030	0.44	-1.8
2,548,496	+		IAI47_12030	0.44	-1.7
2,548,497	-		IAI47_12030	0.44	-0.5
2,548,522	+		IAI47_12030	0.46	-1.6
2,548,523	-		IAI47_12030	0.46	-0.0
2,548,553	+		IAI47_12030	0.48	-0.3
2,548,579	+		IAI47_12030	0.50	-0.0
2,548,579	+		IAI47_12030	0.50	+1.5
2,548,579	+		IAI47_12030	0.50	-1.1
2,548,579	+		IAI47_12030	0.50	+2.8
2,548,579	+		IAI47_12030	0.50	-1.9
2,548,579	+		IAI47_12030	0.50	-1.2
2,548,579	+		IAI47_12030	0.50	+1.4
2,548,579	+		IAI47_12030	0.50	+0.7
2,548,579	+		IAI47_12030	0.50	-2.5
2,548,579	+		IAI47_12030	0.50	+0.0
2,548,579	+		IAI47_12030	0.50	-0.1
2,548,580	-		IAI47_12030	0.50	-0.5
2,548,580	-		IAI47_12030	0.50	-2.2
2,548,580	-		IAI47_12030	0.50	+0.7
2,548,580	-		IAI47_12030	0.50	+0.7
2,548,580	-		IAI47_12030	0.50	+0.1
2,548,580	-		IAI47_12030	0.50	-1.6
2,548,602	+		IAI47_12030	0.52	-1.0
2,548,603	-		IAI47_12030	0.52	+0.0
2,548,622	+		IAI47_12030	0.53	-1.5
2,548,622	+		IAI47_12030	0.53	-0.2
2,548,622	+		IAI47_12030	0.53	-1.4
2,548,622	+		IAI47_12030	0.53	+0.3
2,548,622	+		IAI47_12030	0.53	+0.0
2,548,622	+		IAI47_12030	0.53	-0.9
2,548,622	+		IAI47_12030	0.53	-0.1
2,548,622	+		IAI47_12030	0.53	+4.4
2,548,623	-		IAI47_12030	0.53	-0.6
2,548,623	-		IAI47_12030	0.53	-1.1
2,548,623	-		IAI47_12030	0.53	-0.9
2,548,624	+		IAI47_12030	0.53	-0.9
2,548,625	-		IAI47_12030	0.53	-0.8
2,548,625	-		IAI47_12030	0.53	-1.2
2,548,651	-		IAI47_12030	0.55	-0.5
2,548,705	+		IAI47_12030	0.59	-0.5
2,548,705	+		IAI47_12030	0.59	+0.6
2,548,706	-		IAI47_12030	0.59	-1.4
2,548,710	-		IAI47_12030	0.59	-2.2
2,548,787	+		IAI47_12030	0.64	-1.2
2,548,787	+		IAI47_12030	0.64	-0.3
2,548,787	+		IAI47_12030	0.64	-0.1
2,548,788	-		IAI47_12030	0.65	+0.3