Strain Fitness in Pantoea sp. MT58 around IAI47_11140

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,349,105	+		IAI47_11135	0.40	+0.2
2,349,106	-		IAI47_11135	0.41	-1.4
2,349,106	-		IAI47_11135	0.41	+0.6
2,349,106	-		IAI47_11135	0.41	+0.2
2,349,128	+		IAI47_11135	0.42	-0.1
2,349,128	+		IAI47_11135	0.42	-0.9
2,349,128	+		IAI47_11135	0.42	-0.3
2,349,129	-		IAI47_11135	0.42	+2.7
2,349,129	-		IAI47_11135	0.42	-1.3
2,349,129	-		IAI47_11135	0.42	-1.9
2,349,129	-		IAI47_11135	0.42	+0.6
2,349,129	-		IAI47_11135	0.42	+0.4
2,349,159	+		IAI47_11135	0.44	+0.5
2,349,254	+		IAI47_11135	0.50	+0.8
2,349,254	+		IAI47_11135	0.50	-0.9
2,349,273	+		IAI47_11135	0.51	+0.8
2,349,274	-		IAI47_11135	0.51	+1.0
2,349,274	-		IAI47_11135	0.51	-0.3
2,349,274	-		IAI47_11135	0.51	+0.8
2,349,274	-		IAI47_11135	0.51	-1.0
2,349,407	+		IAI47_11135	0.60	+0.8
2,349,407	+		IAI47_11135	0.60	+0.2
2,349,407	+		IAI47_11135	0.60	-1.4
2,349,407	+		IAI47_11135	0.60	+0.1
2,349,407	+		IAI47_11135	0.60	+1.9
2,349,407	+		IAI47_11135	0.60	+0.4
2,349,407	+		IAI47_11135	0.60	+1.1
2,349,408	-		IAI47_11135	0.60	+1.0
2,349,408	-		IAI47_11135	0.60	+1.4
2,349,408	-		IAI47_11135	0.60	+0.7
2,349,408	-		IAI47_11135	0.60	-1.3
2,349,408	-		IAI47_11135	0.60	+0.5
2,349,408	-		IAI47_11135	0.60	+0.3
2,349,544	+		IAI47_11135	0.69	-1.5
2,349,545	-		IAI47_11135	0.69	-0.6
2,349,638	+		IAI47_11135	0.75	+1.8
2,349,639	-		IAI47_11135	0.75	-0.0
2,349,658	+		IAI47_11135	0.77	-0.5
2,349,658	+		IAI47_11135	0.77	+1.2
2,349,659	-		IAI47_11135	0.77	-0.3
2,349,703	+		IAI47_11135	0.79	+0.7
2,349,703	+		IAI47_11135	0.79	+1.2
2,349,703	+		IAI47_11135	0.79	-0.5
2,349,704	-		IAI47_11135	0.80	+1.7
2,349,704	-		IAI47_11135	0.80	-0.1
2,349,704	-		IAI47_11135	0.80	+2.7
2,349,704	-		IAI47_11135	0.80	-0.4
2,349,728	-		IAI47_11135	0.81	-0.3
2,349,728	-		IAI47_11135	0.81	-0.6
2,349,751	-		IAI47_11135	0.83	-1.2
2,349,908	+				+3.8
2,349,917	+				-0.9
2,350,029	+				-0.5
2,350,029	+				-0.8
2,350,029	+				-0.3
2,350,030	-				-0.0
2,350,087	+				-1.6
2,350,088	-				+0.3
2,350,114	+		IAI47_11140	0.14	+1.3
2,350,174	+		IAI47_11140	0.24	+1.0
2,350,179	+		IAI47_11140	0.25	+0.1
2,350,204	+		IAI47_11140	0.29	+1.1
2,350,215	+		IAI47_11140	0.31	+0.8
2,350,228	+		IAI47_11140	0.33	+1.7
2,350,228	+		IAI47_11140	0.33	-2.0
2,350,228	+		IAI47_11140	0.33	+0.8
2,350,228	+		IAI47_11140	0.33	+1.6
2,350,228	+		IAI47_11140	0.33	+0.5
2,350,230	+		IAI47_11140	0.33	+0.3
2,350,230	+		IAI47_11140	0.33	-0.5
2,350,230	+		IAI47_11140	0.33	+1.4
2,350,231	-		IAI47_11140	0.33	+1.1
2,350,231	-		IAI47_11140	0.33	-1.2
2,350,258	+		IAI47_11140	0.38	-0.2
2,350,338	-		IAI47_11140	0.51	-0.1
2,350,369	+		IAI47_11140	0.56	-0.8
2,350,401	+		IAI47_11140	0.61	-1.9
2,350,407	+		IAI47_11140	0.62	+3.0
2,350,407	+		IAI47_11140	0.62	-0.5
2,350,407	+		IAI47_11140	0.62	+1.2
2,350,407	+		IAI47_11140	0.62	+1.5
2,350,407	+		IAI47_11140	0.62	+0.7
2,350,407	+		IAI47_11140	0.62	-0.0
2,350,407	+		IAI47_11140	0.62	-0.1
2,350,407	+		IAI47_11140	0.62	+2.4
2,350,407	+		IAI47_11140	0.62	+0.3
2,350,407	+		IAI47_11140	0.62	+0.0
2,350,407	+		IAI47_11140	0.62	+1.8
2,350,408	-		IAI47_11140	0.62	+0.2
2,350,408	-		IAI47_11140	0.62	-0.0
2,350,408	-		IAI47_11140	0.62	-0.8
2,350,408	-		IAI47_11140	0.62	+0.5
2,350,408	-		IAI47_11140	0.62	-0.2
2,350,408	-		IAI47_11140	0.62	-0.3
2,350,408	-		IAI47_11140	0.62	+0.5
2,350,408	-		IAI47_11140	0.62	+2.2
2,350,408	-		IAI47_11140	0.62	-0.6
2,350,408	-		IAI47_11140	0.62	+2.8
2,350,599	-				-0.8
2,350,604	+				+1.4
2,350,604	+				+0.5
2,350,604	+				+0.7
2,350,605	-				+2.2
2,350,605	-				-0.3
2,350,605	-				-1.5
2,350,663	-				+1.7
2,350,682	+				+2.7
2,350,682	+				-1.0
2,350,683	-				+0.7
2,350,686	+				-1.3
2,350,687	-				+0.7
2,350,695	+				-2.2
2,350,695	+				-1.6
2,350,695	+				+1.1
2,350,695	+				+1.4
2,350,696	-				-0.5
2,350,696	-				+1.2
2,350,696	-				+0.4
2,350,696	-				+0.9
2,350,795	+		IAI47_11145	0.12	+1.1
2,350,891	+		IAI47_11145	0.22	+0.5
2,350,892	-		IAI47_11145	0.22	-0.7
2,350,994	+		IAI47_11145	0.33	-0.0
2,350,994	+		IAI47_11145	0.33	+1.1
2,350,994	+		IAI47_11145	0.33	+0.1
2,350,995	-		IAI47_11145	0.33	+1.7
2,350,995	-		IAI47_11145	0.33	-1.1
2,351,017	+		IAI47_11145	0.35	+0.9
2,351,017	+		IAI47_11145	0.35	+1.0
2,351,018	-		IAI47_11145	0.36	-0.3
2,351,018	-		IAI47_11145	0.36	+0.4
2,351,018	-		IAI47_11145	0.36	+1.3
2,351,026	+		IAI47_11145	0.36	+0.5
2,351,027	-		IAI47_11145	0.37	+0.4
2,351,027	-		IAI47_11145	0.37	-0.7
2,351,035	+		IAI47_11145	0.37	-0.3
2,351,036	-		IAI47_11145	0.38	-0.9
2,351,036	-		IAI47_11145	0.38	-1.3
2,351,084	-		IAI47_11145	0.43	+2.2
2,351,084	-		IAI47_11145	0.43	+1.7
2,351,091	+		IAI47_11145	0.43	-1.7
2,351,102	+		IAI47_11145	0.45	+0.3
2,351,102	+		IAI47_11145	0.45	+0.5
2,351,137	+		IAI47_11145	0.48	-0.3
2,351,138	-		IAI47_11145	0.48	+0.1
2,351,138	-		IAI47_11145	0.48	-0.3
2,351,138	-		IAI47_11145	0.48	+1.5
2,351,138	-		IAI47_11145	0.48	+0.9
2,351,169	+		IAI47_11145	0.52	-2.4
2,351,169	+		IAI47_11145	0.52	-1.7
2,351,170	-		IAI47_11145	0.52	+0.1
2,351,170	-		IAI47_11145	0.52	-0.1
2,351,234	-		IAI47_11145	0.59	+0.3
2,351,234	-		IAI47_11145	0.59	-0.7
2,351,234	-		IAI47_11145	0.59	+0.5
2,351,288	+		IAI47_11145	0.64	-0.9
2,351,289	-		IAI47_11145	0.65	+3.9
2,351,289	-		IAI47_11145	0.65	-1.2
2,351,323	+		IAI47_11145	0.68	-1.7
2,351,323	+		IAI47_11145	0.68	-0.0
2,351,324	-		IAI47_11145	0.68	+0.8
2,351,324	-		IAI47_11145	0.68	-0.2
2,351,363	+		IAI47_11145	0.72	-0.0
2,351,363	+		IAI47_11145	0.72	-1.9
2,351,363	+		IAI47_11145	0.72	-2.3
2,351,364	-		IAI47_11145	0.73	-0.5
2,351,364	-		IAI47_11145	0.73	+1.5
2,351,368	+		IAI47_11145	0.73	-2.2
2,351,454	+		IAI47_11145	0.82	-1.7
2,351,455	-		IAI47_11145	0.82	+0.7
2,351,455	-		IAI47_11145	0.82	-0.1
2,351,455	-		IAI47_11145	0.82	-0.5
2,351,455	-		IAI47_11145	0.82	-1.8
2,351,455	-		IAI47_11145	0.82	+1.5
2,351,502	+		IAI47_11145	0.87	-0.9
2,351,502	+		IAI47_11145	0.87	+0.7
2,351,503	-		IAI47_11145	0.87	+1.0
2,351,503	-		IAI47_11145	0.87	+1.2
2,351,503	-		IAI47_11145	0.87	+1.1
2,351,503	-		IAI47_11145	0.87	+1.0
2,351,505	+		IAI47_11145	0.88	-0.3
2,351,505	+		IAI47_11145	0.88	+1.2
2,351,505	+		IAI47_11145	0.88	+0.7
2,351,513	-		IAI47_11145	0.88	+1.0
2,351,536	+				-0.1
2,351,536	+				+1.6
2,351,536	+				-0.1
2,351,536	+				+1.2
2,351,537	-				-0.6
2,351,537	-				-1.0
2,351,608	+				+2.2
2,351,633	+				+0.2
2,351,633	+				+1.7
2,351,633	+				-1.0
2,351,633	+				-0.5
2,351,633	+				+1.1
2,351,634	-				-2.1