Strain Fitness in Pantoea sp. MT58 around IAI47_10055

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,128,349	+		IAI47_10045	0.62	+1.3
2,128,349	+		IAI47_10045	0.62	-0.7
2,128,350	-		IAI47_10045	0.62	-0.0
2,128,541	+		IAI47_10045	0.78	-1.3
2,128,553	+		IAI47_10045	0.79	-1.4
2,128,554	-		IAI47_10045	0.79	+0.4
2,128,581	+		IAI47_10045	0.81	+1.3
2,128,592	+		IAI47_10045	0.82	+0.3
2,128,592	+		IAI47_10045	0.82	-0.4
2,128,592	+		IAI47_10045	0.82	-1.6
2,128,593	-		IAI47_10045	0.82	-0.5
2,128,593	-		IAI47_10045	0.82	+0.7
2,128,602	+		IAI47_10045	0.83	+3.4
2,128,660	+		IAI47_10045	0.88	+0.4
2,128,660	+		IAI47_10045	0.88	+0.4
2,128,660	+		IAI47_10045	0.88	-0.4
2,128,660	+		IAI47_10045	0.88	+0.6
2,128,660	+		IAI47_10045	0.88	+0.0
2,128,660	+		IAI47_10045	0.88	-1.5
2,128,660	+		IAI47_10045	0.88	-0.1
2,128,660	+		IAI47_10045	0.88	-0.7
2,128,660	+		IAI47_10045	0.88	-1.4
2,128,660	+		IAI47_10045	0.88	-2.0
2,128,661	-		IAI47_10045	0.88	-1.2
2,128,661	-		IAI47_10045	0.88	+0.2
2,128,661	-		IAI47_10045	0.88	+1.0
2,128,661	-		IAI47_10045	0.88	+1.8
2,128,661	-		IAI47_10045	0.88	+0.7
2,128,661	-		IAI47_10045	0.88	-0.0
2,128,661	-		IAI47_10045	0.88	+0.9
2,128,661	-		IAI47_10045	0.88	+0.8
2,128,661	-		IAI47_10045	0.88	-0.4
2,128,661	-		IAI47_10045	0.88	-0.2
2,128,661	-		IAI47_10045	0.88	+0.6
2,128,661	-		IAI47_10045	0.88	+0.9
2,128,662	+		IAI47_10045	0.88	+0.8
2,128,662	+		IAI47_10045	0.88	-1.2
2,128,662	+		IAI47_10045	0.88	-0.7
2,128,662	+		IAI47_10045	0.88	+1.5
2,128,662	+		IAI47_10045	0.88	+1.6
2,128,662	+		IAI47_10045	0.88	+1.2
2,128,662	+		IAI47_10045	0.88	+0.5
2,128,662	+		IAI47_10045	0.88	-1.3
2,128,662	+		IAI47_10045	0.88	+1.1
2,128,662	+		IAI47_10045	0.88	-1.2
2,128,663	-		IAI47_10045	0.88	-1.2
2,128,663	-		IAI47_10045	0.88	+2.7
2,128,663	-		IAI47_10045	0.88	+2.4
2,128,663	-		IAI47_10045	0.88	-0.8
2,128,663	-		IAI47_10045	0.88	-1.4
2,128,663	-		IAI47_10045	0.88	-0.2
2,128,663	-		IAI47_10045	0.88	+0.1
2,128,663	-		IAI47_10045	0.88	-0.8
2,128,673	-		IAI47_10045	0.89	+0.7
2,128,673	-		IAI47_10045	0.89	-1.0
2,128,708	-				+2.9
2,128,708	-				-0.9
2,128,717	+				+1.3
2,128,717	+				-0.4
2,128,717	+				+2.5
2,128,718	-				-0.7
2,128,718	-				+1.9
2,128,747	+				-1.8
2,128,790	-				+0.1
2,128,794	+				+1.4
2,128,795	-				-0.7
2,128,795	-				+0.2
2,128,805	-				+1.0
2,128,813	+				+0.4
2,128,813	+				+0.4
2,128,813	+				-0.4
2,128,813	+				+1.3
2,128,813	+				+0.2
2,128,813	+				-0.2
2,128,813	+				-0.9
2,128,814	-				+0.8
2,128,814	-				-1.1
2,128,814	-				+1.6
2,128,814	-				-0.8
2,128,814	-				-2.2
2,128,814	-				-0.4
2,128,829	+				+2.3
2,128,829	+				+0.6
2,128,830	-				-1.0
2,128,830	-				+0.8
2,128,830	-				-0.2
2,128,830	-				+0.0
2,128,848	+				+1.0
2,128,912	+				+0.8
2,128,912	+				-0.4
2,128,912	+				+4.0
2,128,928	+				+2.2
2,128,928	+				-0.5
2,128,928	+				+2.2
2,128,928	+				+0.4
2,128,928	+				+0.6
2,128,928	+				-0.4
2,128,928	+				-0.8
2,128,928	+				+0.9
2,128,929	-				+3.0
2,128,929	-				+0.7
2,128,929	-				+2.2
2,128,929	-				-0.3
2,128,929	-				-0.2
2,128,929	-				-0.8
2,128,929	-				-1.0
2,128,929	-				+0.5
2,128,929	-				+0.9
2,128,929	-				-1.5
2,128,929	-				+3.2
2,128,977	-				-0.2
2,128,978	+				+0.3
2,128,978	+				-2.1
2,128,978	+				-2.2
2,128,979	-				+0.8
2,128,979	-				-0.2
2,128,979	-				-0.8
2,128,979	-				+2.2
2,128,998	+				+0.2
2,128,999	-				+0.5
2,128,999	-				+0.8
2,128,999	-				+1.2
2,129,000	+				+1.0
2,129,000	+				-1.0
2,129,000	+				-1.5
2,129,000	+				-1.8
2,129,000	+				+1.4
2,129,000	+				+0.2
2,129,000	+				+0.4
2,129,000	+				+0.6
2,129,000	+				+0.4
2,129,000	+				-0.8
2,129,000	+				-0.2
2,129,000	+				+2.1
2,129,001	-				-0.6
2,129,001	-				-0.8
2,129,001	-				+1.5
2,129,001	-				+0.3
2,129,001	-				+3.2
2,129,001	-				-0.2
2,129,001	-				-1.0
2,129,001	-				+0.0
2,129,001	-				-0.0
2,129,001	-				+0.3
2,129,005	+				-0.4
2,129,005	+				-0.8
2,129,005	+				-1.2
2,129,005	+				-0.4
2,129,006	-				+1.6
2,129,006	-				+1.0
2,129,078	+		IAI47_10050	0.14	+3.2
2,129,079	-		IAI47_10050	0.15	+0.0
2,129,204	+		IAI47_10050	0.61	+0.2
2,129,204	+		IAI47_10050	0.61	+1.0
2,129,205	-		IAI47_10050	0.62	+0.6
2,129,276	+		IAI47_10050	0.88	+0.4
2,129,301	-				-1.2
2,129,304	+				+1.7
2,129,332	+				-0.7
2,129,344	+				-1.0
2,129,345	-				+0.9
2,129,345	-				-1.2
2,129,345	-				+0.3
2,129,345	-				-1.0
2,129,348	+				-2.4
2,129,348	+				+0.2
2,129,349	-				+0.8
2,129,518	+		IAI47_10055	0.28	+1.0
2,129,519	-		IAI47_10055	0.28	+1.6
2,129,579	+		IAI47_10055	0.37	+0.0
2,129,634	+		IAI47_10055	0.46	-2.1
2,129,634	+		IAI47_10055	0.46	-0.7
2,129,634	+		IAI47_10055	0.46	-2.4
2,129,634	+		IAI47_10055	0.46	-1.0
2,129,634	+		IAI47_10055	0.46	+1.0
2,129,635	-		IAI47_10055	0.46	-0.5
2,129,635	-		IAI47_10055	0.46	+1.2
2,129,692	+		IAI47_10055	0.55	-0.5
2,129,692	+		IAI47_10055	0.55	-0.3
2,129,692	+		IAI47_10055	0.55	-1.7
2,129,692	+		IAI47_10055	0.55	+0.8
2,129,692	+		IAI47_10055	0.55	-0.8
2,129,692	+		IAI47_10055	0.55	-1.0
2,129,693	-		IAI47_10055	0.55	+0.1
2,129,693	-		IAI47_10055	0.55	-1.4
2,129,693	-		IAI47_10055	0.55	-0.6
2,129,695	+		IAI47_10055	0.56	+0.2
2,129,695	+		IAI47_10055	0.56	-1.0
2,129,695	+		IAI47_10055	0.56	-1.0
2,129,695	+		IAI47_10055	0.56	-0.7
2,129,695	+		IAI47_10055	0.56	-0.0
2,129,696	-		IAI47_10055	0.56	-0.1
2,129,696	-		IAI47_10055	0.56	+0.6
2,129,696	-		IAI47_10055	0.56	-0.5
2,129,696	-		IAI47_10055	0.56	-0.4
2,129,707	+		IAI47_10055	0.58	-0.2
2,129,707	+		IAI47_10055	0.58	-0.0
2,129,711	+		IAI47_10055	0.58	+0.5
2,129,711	+		IAI47_10055	0.58	-0.5
2,129,712	-				+1.0
2,129,712	-		IAI47_10055	0.58	-0.4
2,129,712	-		IAI47_10055	0.58	-1.9
2,129,712	-		IAI47_10055	0.58	-0.2
2,129,830	+		IAI47_10055	0.77	+2.6
2,129,830	+		IAI47_10055	0.77	+0.9
2,129,830	+		IAI47_10055	0.77	-0.6
2,129,830	+		IAI47_10055	0.77	+0.0
2,129,831	-		IAI47_10055	0.77	-0.4
2,129,853	-		IAI47_10055	0.81	+0.2
2,129,853	-		IAI47_10055	0.81	-0.6
2,129,854	+		IAI47_10055	0.81	+0.1
2,129,854	+		IAI47_10055	0.81	+1.0
2,129,955	+				+1.9
2,129,955	+				-0.6
2,129,956	-				+0.7
2,129,975	+				+0.8
2,129,975	+				-1.4
2,129,975	+				+2.5
2,129,975	+				+0.7
2,129,975	+				+0.2
2,129,975	+				-2.1
2,129,975	+				+0.7
2,129,975	+				-1.0
2,129,975	+				+0.1
2,129,975	+				+1.6
2,129,975	+				-0.0
2,129,975	+				-0.3
2,129,975	+				-0.6
2,129,975	+				+0.3
2,129,975	+				+0.4
2,129,975	+				-1.1
2,129,975	+				+0.6
2,129,975	+				-1.1
2,129,976	-				-1.8
2,129,976	-				+2.2
2,129,976	-				-0.4
2,129,976	-				+1.3
2,129,976	-				+0.2
2,129,976	-				-1.0
2,129,976	-				-1.3
2,129,976	-				+0.4
2,129,976	-				+0.5
2,129,976	-				-2.2
2,129,976	-				-0.6
2,129,976	-				+1.6
2,129,976	-				+0.2
2,129,976	-				+0.2
2,129,976	-				-1.1
2,129,976	-				+0.8
2,129,978	+				+0.2
2,129,978	+				-0.8
2,129,979	-				+0.7
2,129,979	-				+0.2
2,130,025	+				-1.1
2,130,033	+				+0.2
2,130,034	-				+0.3
2,130,034	-				+0.4
2,130,034	-				+0.1
2,130,034	-				-1.7
2,130,034	-				+1.2
2,130,052	-				+0.5
2,130,083	-				-0.8
2,130,134	+				-0.4
2,130,134	+				-1.3
2,130,185	+				-0.1
2,130,215	+				+1.4
2,130,216	-				+0.1
2,130,269	+				+0.8
2,130,269	+				+1.4
2,130,269	+				-0.4
2,130,270	-				-0.8
2,130,310	+				+2.3
2,130,311	-				-0.4
2,130,537	+				+0.8
2,130,570	+				+1.0
2,130,587	+				-1.4
2,130,588	-				+2.1
2,130,607	+				-1.8
2,130,608	-				-1.0
2,130,608	-				-0.3
2,130,635	+				-0.8
2,130,635	+				+0.2
2,130,635	+				-1.4
2,130,636	-				-0.6
2,130,636	-				+0.0
2,130,636	-				+0.0
2,130,638	+				-0.7
2,130,638	+				+1.0
2,130,638	+				-0.6
2,130,638	+				+1.0
2,130,638	+				+2.1
2,130,639	-				+1.9
2,130,760	-		IAI47_10060	0.12	-2.2
2,130,797	+		IAI47_10060	0.15	-0.4
2,130,797	+		IAI47_10060	0.15	+1.6
2,130,797	+		IAI47_10060	0.15	+0.3
2,130,798	-		IAI47_10060	0.15	+0.0
2,130,799	+		IAI47_10060	0.15	+0.0
2,130,800	-		IAI47_10060	0.15	+0.4
2,130,842	+		IAI47_10060	0.18	+0.0
2,130,843	-		IAI47_10060	0.18	+1.0
2,130,883	+		IAI47_10060	0.21	-1.2
2,130,925	+		IAI47_10060	0.25	-0.1
2,130,948	+		IAI47_10060	0.26	-0.2