Strain Fitness in Pantoea sp. MT58 around IAI47_09980

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,110,320	+		IAI47_09970	0.55	+0.2
2,110,320	+		IAI47_09970	0.55	+0.0
2,110,320	+		IAI47_09970	0.55	-0.6
2,110,320	+		IAI47_09970	0.55	+0.2
2,110,321	-		IAI47_09970	0.55	+2.5
2,110,321	-		IAI47_09970	0.55	-0.9
2,110,321	-		IAI47_09970	0.55	+0.5
2,110,340	+		IAI47_09970	0.57	+0.6
2,110,340	+		IAI47_09970	0.57	-0.8
2,110,340	+		IAI47_09970	0.57	+0.7
2,110,340	+		IAI47_09970	0.57	+1.5
2,110,341	-		IAI47_09970	0.57	+0.2
2,110,341	-		IAI47_09970	0.57	-1.5
2,110,342	+		IAI47_09970	0.57	-0.8
2,110,342	+		IAI47_09970	0.57	+2.6
2,110,342	+		IAI47_09970	0.57	+1.2
2,110,372	+		IAI47_09970	0.61	-0.5
2,110,372	+		IAI47_09970	0.61	+0.6
2,110,372	+		IAI47_09970	0.61	-0.6
2,110,372	+		IAI47_09970	0.61	-0.1
2,110,372	+		IAI47_09970	0.61	+0.9
2,110,373	-		IAI47_09970	0.62	-1.0
2,110,373	-		IAI47_09970	0.62	+0.5
2,110,373	-		IAI47_09970	0.62	+0.6
2,110,396	+		IAI47_09970	0.65	+0.5
2,110,415	-		IAI47_09970	0.67	-1.1
2,110,585	+		IAI47_09970	0.90	+0.0
2,110,585	+		IAI47_09970	0.90	+0.7
2,110,687	+				-0.5
2,110,783	+		IAI47_09975	0.25	+1.3
2,110,784	-		IAI47_09975	0.25	-0.5
2,110,784	-		IAI47_09975	0.25	-0.5
2,110,819	+		IAI47_09975	0.32	+0.4
2,110,819	+		IAI47_09975	0.32	-1.3
2,110,819	+		IAI47_09975	0.32	+1.2
2,110,819	+		IAI47_09975	0.32	+0.4
2,110,842	-		IAI47_09975	0.36	-0.1
2,110,961	+		IAI47_09975	0.59	-0.5
2,111,018	+		IAI47_09975	0.70	-0.1
2,111,019	-		IAI47_09975	0.71	+0.6
2,111,019	-		IAI47_09975	0.71	-0.8
2,111,108	+		IAI47_09975	0.88	+0.3
2,111,238	-				-0.7
2,111,240	+				+0.7
2,111,240	+				-0.6
2,111,241	-				-0.7
2,111,293	+				-1.0
2,111,294	-				+0.3
2,111,294	-				+2.6
2,111,299	+				-1.5
2,111,300	-				-0.4
2,111,300	-				-0.0
2,111,357	+		IAI47_09980	0.15	+0.5
2,111,357	+		IAI47_09980	0.15	-1.8
2,111,358	-		IAI47_09980	0.15	-0.4
2,111,358	-		IAI47_09980	0.15	-1.2
2,111,390	+		IAI47_09980	0.23	-0.8
2,111,390	+		IAI47_09980	0.23	+0.0
2,111,390	+		IAI47_09980	0.23	-0.4
2,111,390	+		IAI47_09980	0.23	+1.2
2,111,391	-		IAI47_09980	0.23	-0.1
2,111,391	-		IAI47_09980	0.23	-0.8
2,111,432	+		IAI47_09980	0.34	-0.2
2,111,467	+		IAI47_09980	0.42	+2.6
2,111,467	+		IAI47_09980	0.42	+0.6
2,111,467	+		IAI47_09980	0.42	-1.0
2,111,467	+		IAI47_09980	0.42	-0.5
2,111,468	-		IAI47_09980	0.43	+0.5
2,111,468	-		IAI47_09980	0.43	-0.2
2,111,468	-		IAI47_09980	0.43	-0.5
2,111,468	-		IAI47_09980	0.43	-1.5
2,111,594	+		IAI47_09980	0.74	+0.6
2,111,632	+		IAI47_09980	0.84	-0.6
2,111,632	+		IAI47_09980	0.84	-1.2
2,111,632	+		IAI47_09980	0.84	-0.3
2,111,632	+		IAI47_09980	0.84	+0.0
2,111,633	-		IAI47_09980	0.84	-1.4
2,111,633	-		IAI47_09980	0.84	+1.0
2,111,633	-		IAI47_09980	0.84	-1.5
2,111,633	-		IAI47_09980	0.84	-0.6
2,111,633	-		IAI47_09980	0.84	+0.7
2,111,635	-		IAI47_09980	0.84	+3.7
2,111,675	+				-1.0
2,111,675	+				+0.5
2,111,676	-				+1.6
2,111,676	-				-0.8
2,111,690	+				-0.5
2,111,690	+				+0.3
2,111,723	+				-1.5
2,111,724	-				+0.6
2,111,724	-				+0.7
2,111,724	-				-2.2
2,111,724	-				+0.4
2,111,724	-				-0.8
2,111,724	-				+1.9
2,111,724	-				+1.2
2,111,727	+				-0.7
2,111,728	-				+0.3
2,111,728	-				-1.0
2,111,728	-				+1.8
2,111,728	-				-0.4
2,111,728	-				+1.6
2,111,820	+				+0.8
2,111,820	+				+2.0
2,111,821	-				-0.6
2,111,821	-				+1.2
2,111,821	-				+2.6
2,111,913	-				-0.5
2,111,927	+				+0.3
2,111,952	+				+0.3
2,111,952	+				-0.1
2,111,952	+				-0.4
2,111,952	+				+0.3
2,111,953	-				+1.2
2,111,953	-				+1.9
2,111,953	-				-0.4
2,111,999	+				-0.2
2,112,001	+				+1.2
2,112,001	+				+0.5
2,112,001	+				+0.8
2,112,002	-				-0.2
2,112,002	-				+0.0
2,112,015	+				-0.5
2,112,015	+				-0.6
2,112,015	+				+0.4
2,112,015	+				+1.2
2,112,015	+				-1.2
2,112,015	+				-0.3
2,112,015	+				+0.7
2,112,016	-				-0.5
2,112,016	-				-0.4
2,112,051	-				-1.1
2,112,154	+		IAI47_09985	0.13	-0.0
2,112,154	+		IAI47_09985	0.13	+1.8
2,112,154	+		IAI47_09985	0.13	+0.6
2,112,154	+		IAI47_09985	0.13	-0.5
2,112,154	+		IAI47_09985	0.13	+0.3
2,112,154	+		IAI47_09985	0.13	-0.7
2,112,154	+		IAI47_09985	0.13	+0.1
2,112,155	-		IAI47_09985	0.13	-0.5
2,112,155	-		IAI47_09985	0.13	-1.0
2,112,155	-		IAI47_09985	0.13	+0.3
2,112,155	-		IAI47_09985	0.13	+0.3
2,112,172	+		IAI47_09985	0.15	-1.5
2,112,172	+		IAI47_09985	0.15	+1.0
2,112,172	+		IAI47_09985	0.15	+0.6
2,112,173	-		IAI47_09985	0.15	+0.0
2,112,198	+		IAI47_09985	0.18	-0.2
2,112,199	-		IAI47_09985	0.18	+1.0
2,112,205	+		IAI47_09985	0.18	-1.1
2,112,206	-		IAI47_09985	0.18	-0.4
2,112,285	+		IAI47_09985	0.26	+3.4
2,112,285	+		IAI47_09985	0.26	-1.8
2,112,285	+		IAI47_09985	0.26	-0.2
2,112,286	-		IAI47_09985	0.26	+0.0
2,112,328	+		IAI47_09985	0.30	-0.2
2,112,329	-		IAI47_09985	0.30	+1.3
2,112,329	-		IAI47_09985	0.30	+2.9
2,112,372	+		IAI47_09985	0.34	+0.7
2,112,372	+		IAI47_09985	0.34	+2.0
2,112,372	+		IAI47_09985	0.34	+1.2
2,112,372	+		IAI47_09985	0.34	-0.2
2,112,380	-		IAI47_09985	0.35	+0.3
2,112,380	-		IAI47_09985	0.35	+0.2
2,112,409	-		IAI47_09985	0.38	-0.9
2,112,409	-		IAI47_09985	0.38	+2.0
2,112,427	+		IAI47_09985	0.40	+0.5
2,112,427	+		IAI47_09985	0.40	+0.5
2,112,427	+		IAI47_09985	0.40	+0.3
2,112,427	+		IAI47_09985	0.40	+0.7
2,112,427	+		IAI47_09985	0.40	-0.7
2,112,428	-		IAI47_09985	0.40	+1.2
2,112,428	-		IAI47_09985	0.40	-0.3
2,112,428	-		IAI47_09985	0.40	+0.5
2,112,428	-		IAI47_09985	0.40	-1.8
2,112,428	-		IAI47_09985	0.40	+0.0
2,112,428	-		IAI47_09985	0.40	+0.6
2,112,430	-		IAI47_09985	0.40	+2.6
2,112,546	-		IAI47_09985	0.51	-0.3
2,112,675	+		IAI47_09985	0.64	+0.2
2,112,679	+		IAI47_09985	0.64	+0.5
2,112,679	+		IAI47_09985	0.64	-0.8
2,112,680	-		IAI47_09985	0.64	+0.6
2,112,680	-		IAI47_09985	0.64	-0.4