Strain Fitness in Pantoea sp. MT58 around IAI47_09535

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,013,683	+				+0.4
2,013,695	+				-1.1
2,013,696	-				+1.8
2,013,727	+				-1.2
2,013,727	+				+0.1
2,013,727	+				+3.2
2,013,733	+				+1.7
2,013,733	+				+0.6
2,013,733	+				-1.1
2,013,736	+				+0.8
2,013,736	+				+0.3
2,013,736	+				+0.4
2,013,736	+				-1.4
2,013,736	+				+0.5
2,013,737	-				-0.2
2,013,740	+				-1.0
2,013,740	+				-1.9
2,013,740	+				-2.2
2,013,741	-				+1.2
2,013,741	-				+1.1
2,013,741	-				-0.1
2,013,741	-				+1.8
2,013,741	-				-1.6
2,013,741	-				-0.2
2,013,741	-				+2.7
2,013,744	+				+1.6
2,013,744	+				-1.4
2,013,744	+				+0.3
2,013,749	+				+0.0
2,013,749	+				-0.2
2,013,750	-				-2.3
2,013,753	+				-0.2
2,013,753	+				-2.2
2,013,753	+				-0.8
2,013,753	+				-1.0
2,013,754	-				+3.0
2,013,754	-				+0.9
2,013,754	-				+1.6
2,013,754	-				+1.7
2,013,754	-				+0.9
2,013,755	+				-0.9
2,013,756	-				+2.2
2,013,792	-				+0.7
2,013,804	-				+1.2
2,013,804	-				+1.6
2,013,816	+				-0.3
2,013,852	+				+2.9
2,013,852	+				-1.0
2,013,852	+				-0.2
2,013,853	-				-1.2
2,013,864	+				-0.5
2,013,889	+				-0.3
2,013,889	+				-2.5
2,013,890	-				-0.1
2,013,890	-				-0.4
2,013,956	-				+0.1
2,013,956	-				+0.2
2,013,993	-				+1.1
2,014,038	+				-0.8
2,014,039	-				+2.3
2,014,068	+		IAI47_09530	0.15	+0.3
2,014,068	+		IAI47_09530	0.15	+0.9
2,014,069	-		IAI47_09530	0.15	+0.4
2,014,069	-		IAI47_09530	0.15	+1.9
2,014,072	+		IAI47_09530	0.15	+0.1
2,014,125	+		IAI47_09530	0.25	+0.4
2,014,126	-		IAI47_09530	0.25	-0.4
2,014,152	+		IAI47_09530	0.30	+0.9
2,014,266	+		IAI47_09530	0.52	+1.6
2,014,266	+		IAI47_09530	0.52	-0.4
2,014,266	+		IAI47_09530	0.52	+3.9
2,014,350	+		IAI47_09530	0.68	-1.0
2,014,350	+		IAI47_09530	0.68	+0.5
2,014,351	-		IAI47_09530	0.68	+1.4
2,014,410	+		IAI47_09530	0.79	-1.2
2,014,410	+		IAI47_09530	0.79	+2.2
2,014,410	+		IAI47_09530	0.79	+0.2
2,014,411	-		IAI47_09530	0.79	-0.4
2,014,413	+		IAI47_09530	0.79	+0.8
2,014,413	+		IAI47_09530	0.79	-0.2
2,014,413	+		IAI47_09530	0.79	-1.2
2,014,413	+		IAI47_09530	0.79	+0.6
2,014,413	+		IAI47_09530	0.79	-0.1
2,014,414	-		IAI47_09530	0.80	+0.0
2,014,414	-		IAI47_09530	0.80	+1.2
2,014,414	-		IAI47_09530	0.80	+2.6
2,014,414	-		IAI47_09530	0.80	+3.6
2,014,414	-		IAI47_09530	0.80	+0.6
2,014,414	-		IAI47_09530	0.80	-0.4
2,014,414	-		IAI47_09530	0.80	+0.4
2,014,479	+				+0.3
2,014,479	+				+0.3
2,014,479	+				+1.2
2,014,479	+				+0.8
2,014,479	+				+1.0
2,014,479	+				-1.1
2,014,480	-				+1.0
2,014,480	-				+0.9
2,014,480	-				+1.6
2,014,480	-				+0.2
2,014,485	+				+0.3
2,014,486	-				-0.4
2,014,554	+				-0.1
2,014,554	+				+0.7
2,014,554	+				-0.5
2,014,555	-				-1.1
2,014,555	-				-0.0
2,014,555	-				-1.3
2,014,582	+				+0.3
2,014,582	+				+2.0
2,014,582	+				-1.4
2,014,583	-				+0.1
2,014,583	-				+1.6
2,014,583	-				+0.4
2,014,583	-				+1.1
2,014,583	-				+0.0
2,014,584	+				-1.5
2,014,584	+				-1.1
2,014,631	-				-0.8
2,014,631	-				-0.7
2,014,641	-				-0.6
2,014,682	+				-0.4
2,014,682	+				-1.2
2,014,682	+				+0.0
2,014,682	+				-0.4
2,014,682	+				-2.1
2,014,683	-				-0.4
2,014,683	-				+0.0
2,014,683	-				-0.3
2,014,686	+				-0.1
2,014,686	+				-0.1
2,014,686	+				-0.9
2,014,687	-				+0.4
2,014,687	-				-0.4
2,014,687	-				+1.8
2,014,687	-				+1.5
2,014,687	-				+0.2
2,014,687	-				-1.8
2,014,687	-				-0.1
2,014,689	+				+2.9
2,014,689	+				+0.8
2,014,689	+				-2.3
2,014,689	+				+2.9
2,014,690	-				-1.7
2,014,690	-				-1.2
2,014,694	+				-0.2
2,014,694	+				+0.0
2,014,694	+				+1.5
2,014,694	+				-0.9
2,014,695	-				+0.9
2,014,695	-				+1.1
2,014,695	-				+0.9
2,014,797	+				+0.6
2,014,798	-				+2.0
2,014,798	-				+0.0
2,014,901	+		IAI47_09535	0.15	+0.8
2,014,917	+		IAI47_09535	0.16	+0.4
2,014,917	+		IAI47_09535	0.16	+1.9
2,014,917	+		IAI47_09535	0.16	-1.0
2,014,917	+		IAI47_09535	0.16	-0.2
2,014,918	-		IAI47_09535	0.16	-2.7
2,014,918	-		IAI47_09535	0.16	+2.0
2,014,918	-		IAI47_09535	0.16	-0.0
2,014,918	-		IAI47_09535	0.16	-1.4
2,014,919	+		IAI47_09535	0.16	-0.5
2,014,919	+				-0.5
2,014,919	+		IAI47_09535	0.16	-0.4
2,014,920	-		IAI47_09535	0.16	-1.1
2,014,920	-		IAI47_09535	0.16	-0.9
2,014,920	-		IAI47_09535	0.16	-0.8
2,014,920	-		IAI47_09535	0.16	+0.2
2,014,920	-		IAI47_09535	0.16	+1.4
2,014,920	-		IAI47_09535	0.16	-0.2
2,014,931	+		IAI47_09535	0.17	+1.6
2,014,968	+		IAI47_09535	0.19	+0.0
2,014,969	-		IAI47_09535	0.19	-0.9
2,014,969	-		IAI47_09535	0.19	+0.2
2,014,982	+		IAI47_09535	0.20	-1.7
2,014,987	-		IAI47_09535	0.21	-0.0
2,015,091	-		IAI47_09535	0.28	-1.3
2,015,096	-		IAI47_09535	0.28	+1.3
2,015,115	-		IAI47_09535	0.29	-0.6
2,015,323	+		IAI47_09535	0.43	+1.3
2,015,363	+		IAI47_09535	0.46	+0.7
2,015,527	-		IAI47_09535	0.57	+0.5
2,015,527	-		IAI47_09535	0.57	+0.1
2,015,527	-		IAI47_09535	0.57	+0.5
2,015,581	+		IAI47_09535	0.60	-1.3
2,015,621	-		IAI47_09535	0.63	-0.7
2,015,632	+		IAI47_09535	0.64	-1.2
2,015,682	+		IAI47_09535	0.67	+0.0
2,015,682	+		IAI47_09535	0.67	+4.2
2,015,682	+		IAI47_09535	0.67	-0.8
2,015,682	+		IAI47_09535	0.67	+1.9
2,015,682	+		IAI47_09535	0.67	-0.1
2,015,682	+		IAI47_09535	0.67	+3.5
2,015,682	+		IAI47_09535	0.67	-0.6
2,015,683	-		IAI47_09535	0.67	+2.2
2,015,683	-		IAI47_09535	0.67	-1.3
2,015,693	+		IAI47_09535	0.68	-1.3
2,015,693	+		IAI47_09535	0.68	+0.8
2,015,694	-		IAI47_09535	0.68	+3.5
2,015,694	-		IAI47_09535	0.68	+0.8
2,015,715	-		IAI47_09535	0.69	-1.0
2,015,906	+		IAI47_09535	0.82	-2.0
2,015,906	+		IAI47_09535	0.82	+1.0
2,015,906	+		IAI47_09535	0.82	+3.9
2,015,906	+		IAI47_09535	0.82	+2.1
2,015,907	-		IAI47_09535	0.82	+1.8
2,015,973	+		IAI47_09535	0.87	+1.0
2,015,974	-		IAI47_09535	0.87	+1.4
2,016,155	+				-0.4
2,016,156	-				-1.4
2,016,170	+				+0.4
2,016,170	+				-0.7
2,016,170	+				-0.0
2,016,170	+				+0.4
2,016,170	+				+0.8
2,016,170	+				-1.1
2,016,171	-				+1.0
2,016,171	-				-1.6
2,016,188	+				+0.6
2,016,189	-				+0.6
2,016,189	-				-2.2
2,016,189	-				+0.2
2,016,214	+				+0.3
2,016,300	+				+0.3
2,016,300	+				-1.1
2,016,301	-				-0.8
2,016,301	-				+1.2
2,016,301	-				+0.7
2,016,301	-				-1.6
2,016,305	+				-0.7
2,016,305	+				+0.5
2,016,306	+				+2.6
2,016,460	+		IAI47_09540	0.21	+1.6
2,016,461	-		IAI47_09540	0.21	+1.4
2,016,589	+		IAI47_09540	0.31	-0.9
2,016,589	+		IAI47_09540	0.31	-1.6
2,016,590	-		IAI47_09540	0.31	-0.8
2,016,590	-		IAI47_09540	0.31	+0.4
2,016,657	+		IAI47_09540	0.36	-1.4
2,016,657	+		IAI47_09540	0.36	-0.0
2,016,657	+		IAI47_09540	0.36	-0.4
2,016,695	+		IAI47_09540	0.39	-1.5
2,016,695	+		IAI47_09540	0.39	+0.6
2,016,695	+		IAI47_09540	0.39	+0.4
2,016,695	+		IAI47_09540	0.39	+0.3
2,016,696	-		IAI47_09540	0.39	+0.4
2,016,696	-		IAI47_09540	0.39	-0.2
2,016,696	-		IAI47_09540	0.39	+1.2
2,016,696	-		IAI47_09540	0.39	+0.8
2,016,696	-		IAI47_09540	0.39	+0.6
2,016,713	-		IAI47_09540	0.40	-0.0
2,016,713	-		IAI47_09540	0.40	+0.2
2,016,788	-		IAI47_09540	0.46	-0.3
2,016,863	-		IAI47_09540	0.52	+0.9
2,016,870	+		IAI47_09540	0.52	-1.8
2,016,870	+		IAI47_09540	0.52	-0.4
2,016,871	-		IAI47_09540	0.53	-0.4
2,016,871	-		IAI47_09540	0.53	-0.6
2,016,876	+		IAI47_09540	0.53	+0.3
2,016,876	+		IAI47_09540	0.53	-0.0
2,016,927	+		IAI47_09540	0.57	-0.8
2,016,927	+		IAI47_09540	0.57	-0.1
2,016,928	-		IAI47_09540	0.57	-0.1
2,016,928	-		IAI47_09540	0.57	+1.8
2,016,946	+		IAI47_09540	0.58	-0.6
2,016,946	+		IAI47_09540	0.58	-0.6
2,016,946	+		IAI47_09540	0.58	+2.4
2,016,946	+		IAI47_09540	0.58	+0.4
2,016,946	+		IAI47_09540	0.58	-0.8
2,016,946	+		IAI47_09540	0.58	-2.2
2,016,946	+		IAI47_09540	0.58	+0.1
2,016,946	+		IAI47_09540	0.58	-1.8
2,016,946	+		IAI47_09540	0.58	-0.2
2,016,946	+		IAI47_09540	0.58	-0.4
2,016,946	+		IAI47_09540	0.58	-1.4
2,016,946	+		IAI47_09540	0.58	+1.4
2,016,946	+		IAI47_09540	0.58	+0.0
2,016,946	+		IAI47_09540	0.58	+0.9
2,016,946	+		IAI47_09540	0.58	-0.7
2,016,947	-		IAI47_09540	0.58	+0.1
2,016,947	-		IAI47_09540	0.58	+0.4
2,016,947	-		IAI47_09540	0.58	+1.7
2,016,947	-		IAI47_09540	0.58	+0.9
2,016,947	-		IAI47_09540	0.58	+3.2
2,016,947	-		IAI47_09540	0.58	+1.5
2,016,947	-		IAI47_09540	0.58	+1.3
2,016,947	-		IAI47_09540	0.58	-1.3
2,016,947	-		IAI47_09540	0.58	+0.7
2,016,947	-		IAI47_09540	0.58	+0.0
2,016,947	-		IAI47_09540	0.58	-0.9
2,017,057	-		IAI47_09540	0.67	+2.2
2,017,057	-		IAI47_09540	0.67	+0.6
2,017,057	-		IAI47_09540	0.67	-0.6
2,017,074	+		IAI47_09540	0.68	-0.5
2,017,101	-		IAI47_09540	0.70	+0.9
2,017,110	-		IAI47_09540	0.71	+1.4
2,017,136	+		IAI47_09540	0.73	+0.6
2,017,136	+		IAI47_09540	0.73	-1.2
2,017,136	+		IAI47_09540	0.73	+2.0
2,017,136	+		IAI47_09540	0.73	-0.8
2,017,137	-		IAI47_09540	0.73	-0.9
2,017,137	-		IAI47_09540	0.73	-0.7
2,017,137	-		IAI47_09540	0.73	+0.2
2,017,137	-		IAI47_09540	0.73	-0.8
2,017,137	-		IAI47_09540	0.73	+1.6
2,017,137	-		IAI47_09540	0.73	-1.7
2,017,137	-		IAI47_09540	0.73	+0.0
2,017,137	-		IAI47_09540	0.73	+1.4
2,017,137	-		IAI47_09540	0.73	-0.1
2,017,137	-		IAI47_09540	0.73	+0.4
2,017,152	+		IAI47_09540	0.74	+1.0
2,017,152	+		IAI47_09540	0.74	+1.4
2,017,152	+		IAI47_09540	0.74	-1.0
2,017,152	+		IAI47_09540	0.74	+0.7
2,017,152	+		IAI47_09540	0.74	+0.6
2,017,153	-		IAI47_09540	0.74	-0.0
2,017,153	-		IAI47_09540	0.74	+0.3
2,017,153	-		IAI47_09540	0.74	-0.6