Strain Fitness in Pantoea sp. MT58 around IAI47_05300

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,118,502	-				+0.6
1,118,532	-				-0.1
1,118,532	-				-1.3
1,118,569	+				-0.8
1,118,569	+				-0.5
1,118,569	+				-1.5
1,118,570	-				-0.8
1,118,570	-				-0.4
1,118,570	-				+0.4
1,118,570	-				-0.3
1,118,573	+				-0.5
1,118,573	+				+0.9
1,118,574	-				+1.4
1,118,574	-				-0.1
1,118,574	-				-1.9
1,118,593	-				-1.0
1,118,593	-				+0.1
1,118,593	-				+0.4
1,118,617	+				+0.3
1,118,617	+				+1.4
1,118,617	+				+0.6
1,118,763	+		IAI47_05290	0.30	-1.9
1,118,763	+		IAI47_05290	0.30	-0.7
1,118,763	+		IAI47_05290	0.30	-0.1
1,118,764	-		IAI47_05290	0.30	-0.9
1,118,858	+		IAI47_05290	0.44	-1.4
1,118,858	+		IAI47_05290	0.44	-0.4
1,118,858	+		IAI47_05290	0.44	-0.7
1,118,859	-		IAI47_05290	0.44	-1.7
1,118,883	+		IAI47_05290	0.48	-0.4
1,118,883	+		IAI47_05290	0.48	-1.4
1,118,884	-		IAI47_05290	0.48	+1.3
1,118,884	-		IAI47_05290	0.48	-0.3
1,118,884	-		IAI47_05290	0.48	-2.0
1,118,884	-		IAI47_05290	0.48	+0.7
1,118,952	+		IAI47_05290	0.58	-1.2
1,118,952	+		IAI47_05290	0.58	+0.1
1,119,010	+		IAI47_05290	0.67	-0.7
1,119,010	+		IAI47_05290	0.67	+0.5
1,119,010	+		IAI47_05290	0.67	-1.3
1,119,011	-		IAI47_05290	0.67	+1.0
1,119,011	-		IAI47_05290	0.67	-0.1
1,119,011	-		IAI47_05290	0.67	-2.4
1,119,159	+		IAI47_05290	0.88	+0.1
1,119,159	+		IAI47_05290	0.88	-0.1
1,119,159	+		IAI47_05290	0.88	-0.6
1,119,159	+		IAI47_05290	0.88	+1.3
1,119,159	+		IAI47_05290	0.88	+0.5
1,119,160	-		IAI47_05290	0.89	+0.9
1,119,160	-		IAI47_05290	0.89	-0.6
1,119,160	-		IAI47_05290	0.89	-0.1
1,119,160	-		IAI47_05290	0.89	+0.1
1,119,160	-		IAI47_05290	0.89	-0.3
1,119,160	-		IAI47_05290	0.89	-0.2
1,119,160	-		IAI47_05290	0.89	-1.5
1,119,160	-		IAI47_05290	0.89	-0.1
1,119,235	+				+1.0
1,119,235	+				+3.9
1,119,236	-				-2.1
1,119,271	-				-0.0
1,119,271	-				-1.1
1,119,271	-				+1.9
1,119,290	-		IAI47_05295	0.11	+2.3
1,119,307	+		IAI47_05295	0.20	+0.7
1,119,307	+		IAI47_05295	0.20	-0.5
1,119,307	+		IAI47_05295	0.20	+0.1
1,119,308	-		IAI47_05295	0.21	+1.0
1,119,308	-		IAI47_05295	0.21	+1.5
1,119,347	-		IAI47_05295	0.41	-2.2
1,119,349	-		IAI47_05295	0.42	+0.2
1,119,386	-		IAI47_05295	0.62	+1.6
1,119,387	+		IAI47_05295	0.62	-0.2
1,119,388	-		IAI47_05295	0.63	+0.6
1,119,388	-		IAI47_05295	0.63	+1.4
1,119,438	+		IAI47_05295	0.89	+1.3
1,119,439	-				-0.9
1,119,439	-				-1.4
1,119,449	-				+1.5
1,119,469	+				-1.1
1,119,470	-				-1.3
1,120,608	-				-0.9
1,120,608	-				+2.1
1,120,609	-				-1.0
1,120,611	-				-4.2
1,120,611	-				-0.2
1,120,611	-				-3.1
1,120,638	-				-0.9
1,120,698	+		IAI47_05305	0.24	+4.6
1,120,698	+		IAI47_05305	0.24	-0.8
1,120,698	+		IAI47_05305	0.24	-0.4
1,120,780	-		IAI47_05305	0.46	+0.3
1,120,803	+		IAI47_05305	0.53	-1.4
1,120,803	+		IAI47_05305	0.53	-0.6
1,120,803	+		IAI47_05305	0.53	-1.3
1,120,803	+		IAI47_05305	0.53	-0.0
1,120,804	-		IAI47_05305	0.53	+2.2
1,120,804	-		IAI47_05305	0.53	+0.1
1,120,804	-		IAI47_05305	0.53	+0.2
1,120,804	-		IAI47_05305	0.53	-1.6
1,120,804	-		IAI47_05305	0.53	-1.1
1,120,804	-		IAI47_05305	0.53	-0.3
1,120,817	+		IAI47_05305	0.56	-0.7
1,120,818	-		IAI47_05305	0.57	-0.2
1,120,875	-		IAI47_05305	0.72	+0.1
1,120,889	+		IAI47_05305	0.76	-0.8
1,120,890	-		IAI47_05305	0.76	+1.8
1,120,930	+		IAI47_05305	0.87	-0.1
1,120,989	+				-1.1
1,121,038	+				+0.6
1,121,038	+				+0.1
1,121,038	+				-1.0
1,121,039	-				-0.8
1,121,039	-				+0.6
1,121,039	-				+1.3
1,121,039	-				-0.4
1,121,043	+				-1.0
1,121,043	+				-0.1
1,121,044	-				-0.1
1,121,044	-				-0.4
1,121,044	-				+0.2
1,121,197	+				+0.6
1,121,197	+				-1.0
1,121,198	-				-1.1
1,121,202	+				+1.9
1,121,202	+				-0.6
1,121,202	+				+0.2
1,121,203	-				+0.1
1,121,203	-				-0.2
1,121,203	-				-0.7
1,121,203	-				-0.5
1,121,219	+				-0.5
1,121,224	+				+1.3
1,121,225	-				-0.9
1,121,229	+				+1.7
1,121,298	+				+0.7
1,121,318	-				-0.7
1,121,318	-				+0.6
1,121,318	-				-0.7
1,121,328	+				-1.1
1,121,328	+				+1.0
1,121,328	+				+1.6
1,121,328	+				-1.4
1,121,329	-				+0.1
1,121,329	-				-1.5
1,121,329	-				+2.0
1,121,334	+				-1.2
1,121,334	+				+1.4
1,121,335	-				+0.6
1,121,335	-				-1.4
1,121,359	+				-0.4
1,121,376	+				-1.1
1,121,376	+				+0.1
1,121,376	+				+1.1
1,121,376	+				+3.0
1,121,376	+				+2.3
1,121,376	+				-0.2
1,121,376	+				-1.1
1,121,377	-				+0.6
1,121,377	-				+1.4
1,121,377	-				+0.4
1,121,377	-				+0.3
1,121,377	-				+1.2
1,121,439	+				-0.7
1,121,439	+				+1.0
1,121,450	+				+1.2
1,121,450	+				+0.6
1,121,450	+				+0.1
1,121,450	+				+0.1
1,121,451	-				-2.5
1,121,463	+				-0.3
1,121,464	-				+0.4
1,121,464	-				-1.4
1,121,497	-				+1.5
1,121,511	+				-1.0
1,121,511	+				+1.5
1,121,511	+				+3.0
1,121,512	-				+0.0
1,121,543	+				+1.1