Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS07660

Experiment: McCas_formate_complete Phenazine methosulfate 0.0166666666666667 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Phenazine methosulfate 0.0166666666666667 mM
1,400,459	+		MMJJ_RS07650	0.53	+5.3
1,400,511	-		MMJJ_RS07650	0.59	+5.9
1,400,512	+		MMJJ_RS07650	0.59	+4.9
1,400,512	+		MMJJ_RS07650	0.59	+7.6
1,400,558	-		MMJJ_RS07650	0.65	+6.7
1,400,558	-		MMJJ_RS07650	0.65	+5.0
1,400,567	-		MMJJ_RS07650	0.66	+5.3
1,400,575	-		MMJJ_RS07650	0.67	+6.4
1,400,576	+		MMJJ_RS07650	0.67	+4.4
1,400,580	+		MMJJ_RS07650	0.67	+4.2
1,400,593	-		MMJJ_RS07650	0.69	+7.6
1,400,593	-		MMJJ_RS07650	0.69	+3.0
1,400,593	-		MMJJ_RS07650	0.69	+3.1
1,400,593	-		MMJJ_RS07650	0.69	+4.1
1,400,594	+		MMJJ_RS07650	0.69	+6.4
1,400,594	+		MMJJ_RS07650	0.69	+6.6
1,400,594	+		MMJJ_RS07650	0.69	+5.3
1,400,697	-		MMJJ_RS07650	0.81	+5.1
1,400,697	-		MMJJ_RS07650	0.81	+5.0
1,400,697	-		MMJJ_RS07650	0.81	+6.0
1,400,698	+		MMJJ_RS07650	0.82	-0.4
1,400,698	+		MMJJ_RS07650	0.82	+5.9
1,400,698	+		MMJJ_RS07650	0.82	+6.0
1,400,698	+		MMJJ_RS07650	0.82	+6.8
1,400,703	+		MMJJ_RS07650	0.82	+4.9
1,400,804	+				+2.3
1,400,818	-				+4.8
1,400,818	-				+3.1
1,400,818	-				+5.4
1,400,818	-				-0.4
1,400,819	+				+5.1
1,400,819	+				+7.2
1,400,819	+				+7.0
1,400,819	+				+5.6
1,400,820	-				+4.7
1,400,821	+				+5.1
1,400,860	-				+5.9
1,400,861	+				+6.9
1,400,864	+				+4.9
1,400,884	+				+2.5
1,400,884	+				+0.2
1,400,884	+				+4.8
1,400,895	+				+5.5
1,400,900	-				-0.4
1,400,901	+				+3.3
1,400,901	+				+4.1
1,400,906	-				+4.0
1,400,906	-				+5.1
1,400,907	+				+1.2
1,400,949	-		MMJJ_RS07655	0.12	+5.8
1,400,950	+		MMJJ_RS07655	0.12	+0.2
1,400,963	-		MMJJ_RS07655	0.14	+6.2
1,400,963	-		MMJJ_RS07655	0.14	+0.2
1,400,963	-		MMJJ_RS07655	0.14	+6.0
1,400,964	+		MMJJ_RS07655	0.14	+3.7
1,400,964	+		MMJJ_RS07655	0.14	+5.1
1,400,992	-		MMJJ_RS07655	0.20	+2.0
1,400,992	-		MMJJ_RS07655	0.20	+5.7
1,400,992	-		MMJJ_RS07655	0.20	+5.7
1,400,994	-		MMJJ_RS07655	0.20	+4.3
1,400,995	+		MMJJ_RS07655	0.20	+5.5
1,401,000	-		MMJJ_RS07655	0.21	+4.2
1,401,001	+		MMJJ_RS07655	0.21	+4.4
1,401,018	+		MMJJ_RS07655	0.25	+4.1
1,401,018	+		MMJJ_RS07655	0.25	+6.5
1,401,036	-		MMJJ_RS07655	0.28	+4.7
1,401,036	-		MMJJ_RS07655	0.28	+5.4
1,401,036	-		MMJJ_RS07655	0.28	+6.0
1,401,041	-		MMJJ_RS07655	0.29	+1.2
1,401,082	+		MMJJ_RS07655	0.37	+5.2
1,401,090	+		MMJJ_RS07655	0.38	+4.8
1,401,113	+		MMJJ_RS07655	0.42	+5.5
1,401,113	+		MMJJ_RS07655	0.42	+5.9
1,401,116	-		MMJJ_RS07655	0.43	+6.7
1,401,116	-		MMJJ_RS07655	0.43	+1.9
1,401,116	-		MMJJ_RS07655	0.43	+4.8
1,401,116	-		MMJJ_RS07655	0.43	+6.2
1,401,116	-		MMJJ_RS07655	0.43	+4.1
1,401,117	+		MMJJ_RS07655	0.43	+5.7
1,401,117	+		MMJJ_RS07655	0.43	+4.4
1,401,117	+		MMJJ_RS07655	0.43	+5.4
1,401,117	+		MMJJ_RS07655	0.43	+3.0
1,401,117	+		MMJJ_RS07655	0.43	+4.8
1,401,117	+		MMJJ_RS07655	0.43	+6.1
1,401,117	+		MMJJ_RS07655	0.43	+2.3
1,401,117	+		MMJJ_RS07655	0.43	+6.8
1,401,117	+		MMJJ_RS07655	0.43	+5.2
1,401,117	+		MMJJ_RS07655	0.43	+5.4
1,401,133	-		MMJJ_RS07655	0.46	+4.6
1,401,138	-		MMJJ_RS07655	0.47	+5.2
1,401,139	+		MMJJ_RS07655	0.47	+3.9
1,401,139	+		MMJJ_RS07655	0.47	+4.6
1,401,139	+		MMJJ_RS07655	0.47	+6.8
1,401,139	+		MMJJ_RS07655	0.47	+2.8
1,401,139	+		MMJJ_RS07655	0.47	+3.1
1,401,139	+		MMJJ_RS07655	0.47	+4.0
1,401,153	-		MMJJ_RS07655	0.50	+4.8
1,401,160	+		MMJJ_RS07655	0.51	+3.2
1,401,160	+		MMJJ_RS07655	0.51	+5.3
1,401,165	+		MMJJ_RS07655	0.52	+4.2
1,401,203	-		MMJJ_RS07655	0.59	+5.7
1,401,203	-		MMJJ_RS07655	0.59	+5.3
1,401,215	-		MMJJ_RS07655	0.61	+6.7
1,401,241	+		MMJJ_RS07655	0.66	+3.7
1,401,260	-		MMJJ_RS07655	0.70	+6.0
1,401,261	+		MMJJ_RS07655	0.70	+6.1
1,401,261	+		MMJJ_RS07655	0.70	+2.2
1,401,310	+		MMJJ_RS07655	0.79	+3.9
1,401,314	-		MMJJ_RS07655	0.80	+4.1
1,401,314	-		MMJJ_RS07655	0.80	+7.0
1,401,315	+		MMJJ_RS07655	0.80	+5.5
1,401,315	+		MMJJ_RS07655	0.80	+4.7
1,401,315	+		MMJJ_RS07655	0.80	+5.4
1,401,315	+		MMJJ_RS07655	0.80	+3.6
1,401,315	+		MMJJ_RS07655	0.80	+3.4
1,401,315	+		MMJJ_RS07655	0.80	+4.7
1,401,332	-		MMJJ_RS07655	0.83	+5.2
1,401,333	+		MMJJ_RS07655	0.84	+4.2
1,401,333	+		MMJJ_RS07655	0.84	-0.4
1,401,336	-		MMJJ_RS07655	0.84	+5.0
1,401,360	+		MMJJ_RS07655	0.89	+5.1
1,401,388	+				+4.4
1,401,388	+				+3.9
1,401,392	-				+6.1
1,401,392	-				+4.4
1,401,392	-				+5.4
1,401,392	-				+4.2
1,401,393	+				+4.6
1,401,393	+				+5.5
1,401,394	-				+0.2
1,401,436	+				+5.6
1,401,438	+				+6.0
1,401,494	-		MMJJ_RS07660	0.12	+6.1
1,401,494	-		MMJJ_RS07660	0.12	-0.8
1,401,577	-		MMJJ_RS07660	0.30	+6.3
1,401,589	-		MMJJ_RS07660	0.33	+5.2
1,401,602	+		MMJJ_RS07660	0.36	+4.0
1,401,602	+		MMJJ_RS07660	0.36	+5.6
1,401,604	-		MMJJ_RS07660	0.36	+4.5
1,401,605	+		MMJJ_RS07660	0.36	+5.4
1,401,613	-		MMJJ_RS07660	0.38	-0.8
1,401,613	-		MMJJ_RS07660	0.38	+0.2
1,401,614	+		MMJJ_RS07660	0.38	+6.2
1,401,615	-		MMJJ_RS07660	0.38	+4.5
1,401,616	+		MMJJ_RS07660	0.39	+5.6
1,401,616	+		MMJJ_RS07660	0.39	+4.8
1,401,616	+		MMJJ_RS07660	0.39	+4.0
1,401,616	+		MMJJ_RS07660	0.39	+5.9
1,401,645	+		MMJJ_RS07660	0.45	+5.8
1,401,707	+		MMJJ_RS07660	0.59	+5.5
1,401,833	-		MMJJ_RS07660	0.87	+4.9
1,401,853	-				+4.5
1,401,853	-				+4.2
1,401,862	-				+5.6
1,401,863	+				+5.3
1,401,886	-				+5.4
1,401,941	+				+4.1
1,401,955	-				+3.7
1,401,956	+				+5.2
1,401,956	+				+6.8
1,401,960	+				+6.1
1,401,976	-				+3.8
1,401,976	-				+6.5
1,401,985	-				+5.7
1,401,986	+				+5.6
1,401,995	-				+4.9
1,401,996	+				+5.5
1,402,009	-				+5.8
1,402,009	-				+4.6
1,402,014	-				+5.0
1,402,017	-				+5.4
1,402,018	+				+5.7
1,402,018	+				+4.4
1,402,018	+				+8.9
1,402,019	-				+6.6
1,402,019	-				+5.7
1,402,019	-				+5.5
1,402,019	-				+5.2
1,402,020	+				+5.1
1,402,020	+				+4.8
1,402,020	+				+6.2
1,402,020	+				+4.9
1,402,020	+				+6.1
1,402,023	-				+4.5
1,402,023	-				+5.4
1,402,024	+				+6.3
1,402,024	+				+6.3
1,402,024	+				+6.0
1,402,024	+				+4.6
1,402,024	+				+6.0
1,402,027	-				+5.1
1,402,027	-				+4.2
1,402,027	-				+5.5
1,402,027	-				+2.5
1,402,027	-				+5.7
1,402,027	-				+6.2
1,402,027	-				+3.2
1,402,027	-				+4.9
1,402,027	-				+5.7
1,402,027	-				+3.9
1,402,028	+				+5.7
1,402,028	+				+6.2
1,402,028	+				+5.3
1,402,028	+				+4.3
1,402,028	+				+4.7
1,402,028	+				+4.9
1,402,029	-				+4.8
1,402,030	+				+3.9
1,402,030	+				+6.4
1,402,030	+				+6.0
1,402,033	-				+6.7
1,402,034	+				+4.6
1,402,050	-				+0.2
1,402,051	+				+3.7
1,402,063	-				+5.2
1,402,063	-				+4.7
1,402,063	-				+4.8
1,402,064	+				+3.9
1,402,078	-				+4.0
1,402,083	-				+4.2
1,402,083	-				+3.6
1,402,084	+				+5.4
1,402,084	+				+4.2
1,402,087	-				+4.5
1,402,093	-				+4.1
1,402,096	-				+3.5
1,402,168	-				+3.7
1,402,169	+				+5.0
1,402,170	-				+3.9
1,402,170	-				+0.6
1,402,170	-				+4.9
1,402,170	-				+4.5
1,402,171	+				+4.5
1,402,175	+				+3.6
1,402,177	+				+4.4
1,402,193	-				+4.4
1,402,201	-				+3.8
1,402,259	+				+4.6
1,402,296	+				+4.2
1,402,331	-				+3.1
1,402,331	-				+4.3
1,402,341	-				+4.4
1,402,341	-				+3.5
1,402,341	-				+4.6
1,402,342	+				+5.2
1,402,371	+				+3.7
1,402,371	+				+3.5
1,402,435	-		MMJJ_RS07665	0.12	+4.0
1,402,436	+		MMJJ_RS07665	0.12	+3.7
1,402,465	+		MMJJ_RS07665	0.13	+4.1
1,402,505	-		MMJJ_RS07665	0.15	+4.3
1,402,506	+		MMJJ_RS07665	0.15	+3.8
1,402,506	+		MMJJ_RS07665	0.15	+1.2
1,402,521	-		MMJJ_RS07665	0.16	+4.5
1,402,521	-		MMJJ_RS07665	0.16	+4.3
1,402,521	-		MMJJ_RS07665	0.16	+6.9
1,402,521	-		MMJJ_RS07665	0.16	+4.8
1,402,521	-		MMJJ_RS07665	0.16	+3.9
1,402,521	-		MMJJ_RS07665	0.16	+5.2
1,402,521	-		MMJJ_RS07665	0.16	+4.5
1,402,521	-		MMJJ_RS07665	0.16	+4.6
1,402,521	-		MMJJ_RS07665	0.16	+3.8
1,402,521	-		MMJJ_RS07665	0.16	+3.6
1,402,521	-		MMJJ_RS07665	0.16	+4.4
1,402,522	+		MMJJ_RS07665	0.16	+4.8
1,402,522	+		MMJJ_RS07665	0.16	+4.4
1,402,522	+		MMJJ_RS07665	0.16	+4.3
1,402,522	+		MMJJ_RS07665	0.16	+2.2
1,402,522	+		MMJJ_RS07665	0.16	+4.3
1,402,522	+		MMJJ_RS07665	0.16	+5.4
1,402,522	+		MMJJ_RS07665	0.16	+2.3
1,402,525	-		MMJJ_RS07665	0.16	+4.8
1,402,525	-		MMJJ_RS07665	0.16	+3.5
1,402,525	-		MMJJ_RS07665	0.16	+6.5
1,402,525	-		MMJJ_RS07665	0.16	+5.8
1,402,526	+		MMJJ_RS07665	0.16	+4.7
1,402,552	-		MMJJ_RS07665	0.18	+4.5
1,402,562	-		MMJJ_RS07665	0.18	+5.1
1,402,562	-		MMJJ_RS07665	0.18	+5.6
1,402,563	+		MMJJ_RS07665	0.18	+4.7
1,402,637	-		MMJJ_RS07665	0.22	+4.9
1,402,660	-		MMJJ_RS07665	0.23	+3.2
1,402,660	-		MMJJ_RS07665	0.23	+4.3
1,402,660	-		MMJJ_RS07665	0.23	+4.5
1,402,660	-		MMJJ_RS07665	0.23	+3.4
1,402,660	-		MMJJ_RS07665	0.23	+5.7
1,402,660	-		MMJJ_RS07665	0.23	+5.3
1,402,661	+		MMJJ_RS07665	0.23	+4.0
1,402,676	-		MMJJ_RS07665	0.24	+4.3
1,402,676	-		MMJJ_RS07665	0.24	+5.1
1,402,676	-		MMJJ_RS07665	0.24	+4.0
1,402,677	+		MMJJ_RS07665	0.24	+4.7
1,402,677	+		MMJJ_RS07665	0.24	+5.7
1,402,677	+		MMJJ_RS07665	0.24	+4.1
1,402,677	+		MMJJ_RS07665	0.24	+3.9
1,402,679	+		MMJJ_RS07665	0.24	+4.7
1,402,684	-		MMJJ_RS07665	0.24	+3.9
1,402,684	-		MMJJ_RS07665	0.24	+5.2
1,402,685	+		MMJJ_RS07665	0.24	+3.9
1,402,697	-		MMJJ_RS07665	0.25	+5.4
1,402,697	-		MMJJ_RS07665	0.25	+3.6
1,402,697	-		MMJJ_RS07665	0.25	+4.0
1,402,698	+		MMJJ_RS07665	0.25	+5.5
1,402,757	-		MMJJ_RS07665	0.28	+4.5
1,402,771	-		MMJJ_RS07665	0.28	+5.0
1,402,772	+		MMJJ_RS07665	0.29	+4.3
1,402,772	+		MMJJ_RS07665	0.29	+4.9
1,402,772	+		MMJJ_RS07665	0.29	+6.0
1,402,772	+		MMJJ_RS07665	0.29	+2.5
1,402,813	+		MMJJ_RS07665	0.31	+5.0
1,402,816	-		MMJJ_RS07665	0.31	+5.0
1,402,816	-		MMJJ_RS07665	0.31	+4.9
1,402,816	-		MMJJ_RS07665	0.31	+3.3
1,402,816	-		MMJJ_RS07665	0.31	+3.5
1,402,817	+		MMJJ_RS07665	0.31	+4.4
1,402,822	-		MMJJ_RS07665	0.31	+4.8
1,402,838	-		MMJJ_RS07665	0.32	+5.9
1,402,859	+		MMJJ_RS07665	0.33	+6.4
1,402,868	+		MMJJ_RS07665	0.33	+5.3