Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS05435

Experiment: McCas_formate_complete Phenazine methosulfate 0.0166666666666667 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Phenazine methosulfate 0.0166666666666667 mM
1,010,401	-				-1.0
1,010,410	-				-0.2
1,010,414	-				-0.7
1,010,415	+				-0.7
1,010,420	-				-2.2
1,010,425	+				+2.2
1,010,425	+				+0.1
1,010,430	-				-2.1
1,010,431	+				+1.3
1,010,431	+				+0.9
1,010,431	+				-1.7
1,010,434	-				+0.9
1,010,435	+				+0.1
1,010,439	-				+1.3
1,010,439	-				+2.7
1,010,439	-				+1.4
1,010,439	-				+1.4
1,010,440	+				+3.0
1,010,440	+				+1.0
1,010,440	+				-1.3
1,010,443	-				-1.0
1,010,443	-				-1.4
1,010,444	+				+0.3
1,010,447	-				+1.6
1,010,448	+				-1.0
1,010,486	-				+0.3
1,010,511	-				-0.6
1,010,540	+				-1.6
1,010,545	-				+1.5
1,010,574	-				+1.7
1,010,578	+				-4.4
1,010,578	+				+1.6
1,010,623	-				+0.3
1,010,628	-		MMJJ_RS05435	0.10	+1.9
1,010,628	-		MMJJ_RS05435	0.10	-1.2
1,010,629	+		MMJJ_RS05435	0.10	+0.3
1,010,630	-		MMJJ_RS05435	0.10	+1.1
1,010,630	-		MMJJ_RS05435	0.10	+1.8
1,010,631	+		MMJJ_RS05435	0.10	-0.2
1,010,631	+		MMJJ_RS05435	0.10	-0.2
1,010,631	+		MMJJ_RS05435	0.10	+1.0
1,010,631	+		MMJJ_RS05435	0.10	+1.3
1,010,635	-		MMJJ_RS05435	0.10	+2.3
1,010,711	+		MMJJ_RS05435	0.15	+1.1
1,010,722	+		MMJJ_RS05435	0.16	-2.1
1,010,746	-		MMJJ_RS05435	0.17	+2.4
1,010,751	+		MMJJ_RS05435	0.18	-0.0
1,010,772	+		MMJJ_RS05435	0.19	+0.1
1,010,772	+		MMJJ_RS05435	0.19	+1.5
1,010,773	-		MMJJ_RS05435	0.19	-0.0
1,010,776	-		MMJJ_RS05435	0.19	-3.5
1,010,781	-		MMJJ_RS05435	0.20	+2.2
1,010,781	-		MMJJ_RS05435	0.20	+1.5
1,010,781	-		MMJJ_RS05435	0.20	+0.4
1,010,781	-		MMJJ_RS05435	0.20	-1.4
1,010,782	+		MMJJ_RS05435	0.20	+0.8
1,010,782	+		MMJJ_RS05435	0.20	+2.0
1,010,799	-		MMJJ_RS05435	0.21	+1.9
1,010,845	-		MMJJ_RS05435	0.24	-1.4
1,010,850	+		MMJJ_RS05435	0.24	+1.6
1,010,850	+		MMJJ_RS05435	0.24	+2.6
1,010,850	+		MMJJ_RS05435	0.24	+0.6
1,010,859	-		MMJJ_RS05435	0.25	+0.4
1,010,866	-		MMJJ_RS05435	0.25	+1.6
1,010,866	-		MMJJ_RS05435	0.25	+0.3
1,010,866	-		MMJJ_RS05435	0.25	+1.6
1,010,866	-		MMJJ_RS05435	0.25	-1.6
1,010,866	-		MMJJ_RS05435	0.25	-0.1
1,010,871	-		MMJJ_RS05435	0.25	+3.3
1,010,872	+		MMJJ_RS05435	0.25	-2.2
1,010,872	+		MMJJ_RS05435	0.25	+1.2
1,010,872	+		MMJJ_RS05435	0.25	-2.5
1,010,881	-		MMJJ_RS05435	0.26	-0.1
1,010,907	-		MMJJ_RS05435	0.28	+0.8
1,010,908	+		MMJJ_RS05435	0.28	-1.0
1,010,929	-		MMJJ_RS05435	0.29	-1.1
1,010,930	+		MMJJ_RS05435	0.29	+1.2
1,010,951	-		MMJJ_RS05435	0.30	+1.8
1,010,960	+		MMJJ_RS05435	0.31	-1.0
1,010,977	-		MMJJ_RS05435	0.32	+1.8
1,010,977	-		MMJJ_RS05435	0.32	+0.3
1,010,987	+		MMJJ_RS05435	0.33	-1.2
1,011,051	-				+0.3
1,011,051	-		MMJJ_RS05435	0.37	+2.2
1,011,068	-		MMJJ_RS05435	0.38	-2.3
1,011,096	-		MMJJ_RS05435	0.40	-0.2
1,011,099	-		MMJJ_RS05435	0.40	+0.1
1,011,100	+		MMJJ_RS05435	0.40	+1.0
1,011,101	-		MMJJ_RS05435	0.40	+1.3
1,011,101	-		MMJJ_RS05435	0.40	-1.7
1,011,102	+		MMJJ_RS05435	0.40	-1.2
1,011,103	-		MMJJ_RS05435	0.40	+2.5
1,011,104	+		MMJJ_RS05435	0.40	+2.7
1,011,104	+		MMJJ_RS05435	0.40	-2.7
1,011,104	+				+1.3
1,011,104	+		MMJJ_RS05435	0.40	+1.8
1,011,104	+		MMJJ_RS05435	0.40	+1.8
1,011,132	-		MMJJ_RS05435	0.42	+1.4
1,011,132	-		MMJJ_RS05435	0.42	-1.7
1,011,132	-		MMJJ_RS05435	0.42	+0.3
1,011,133	+		MMJJ_RS05435	0.42	+1.1
1,011,175	+		MMJJ_RS05435	0.45	+2.4
1,011,175	+		MMJJ_RS05435	0.45	-1.7
1,011,229	+		MMJJ_RS05435	0.48	+3.2
1,011,229	+		MMJJ_RS05435	0.48	+0.5
1,011,232	-		MMJJ_RS05435	0.48	+2.0
1,011,232	-		MMJJ_RS05435	0.48	-0.7
1,011,232	-		MMJJ_RS05435	0.48	+1.8
1,011,232	-		MMJJ_RS05435	0.48	-0.7
1,011,233	+		MMJJ_RS05435	0.48	+0.7
1,011,233	+		MMJJ_RS05435	0.48	+0.9
1,011,233	+		MMJJ_RS05435	0.48	-3.0
1,011,233	+		MMJJ_RS05435	0.48	+1.3
1,011,233	+		MMJJ_RS05435	0.48	+0.3
1,011,233	+		MMJJ_RS05435	0.48	+1.9
1,011,233	+		MMJJ_RS05435	0.48	+2.1
1,011,243	+		MMJJ_RS05435	0.49	-3.0
1,011,243	+		MMJJ_RS05435	0.49	-0.4
1,011,265	+		MMJJ_RS05435	0.50	-1.6
1,011,299	+		MMJJ_RS05435	0.52	-1.5
1,011,331	-		MMJJ_RS05435	0.54	+1.9
1,011,331	-		MMJJ_RS05435	0.54	+2.3
1,011,331	-		MMJJ_RS05435	0.54	-0.7
1,011,331	-		MMJJ_RS05435	0.54	-1.5
1,011,332	+		MMJJ_RS05435	0.54	+0.0
1,011,332	+		MMJJ_RS05435	0.54	+2.7
1,011,332	+		MMJJ_RS05435	0.54	-2.3
1,011,343	+		MMJJ_RS05435	0.55	+3.3
1,011,349	-		MMJJ_RS05435	0.56	+1.2
1,011,350	+		MMJJ_RS05435	0.56	-2.4
1,011,350	+		MMJJ_RS05435	0.56	-0.9
1,011,393	-		MMJJ_RS05435	0.58	-0.2
1,011,393	-		MMJJ_RS05435	0.58	+2.5
1,011,394	+		MMJJ_RS05435	0.58	+1.0
1,011,394	+		MMJJ_RS05435	0.58	+0.5
1,011,405	-		MMJJ_RS05435	0.59	+2.6
1,011,406	+		MMJJ_RS05435	0.59	-1.3
1,011,413	+		MMJJ_RS05435	0.60	+0.6
1,011,413	+		MMJJ_RS05435	0.60	-0.3
1,011,413	+		MMJJ_RS05435	0.60	+2.4
1,011,413	+		MMJJ_RS05435	0.60	+1.9
1,011,419	+		MMJJ_RS05435	0.60	-2.6
1,011,443	+		MMJJ_RS05435	0.61	+3.5
1,011,474	+		MMJJ_RS05435	0.63	-1.9
1,011,474	+		MMJJ_RS05435	0.63	-2.1
1,011,474	+		MMJJ_RS05435	0.63	+1.3
1,011,478	-		MMJJ_RS05435	0.64	+0.8
1,011,479	+		MMJJ_RS05435	0.64	-1.2
1,011,500	-		MMJJ_RS05435	0.65	-2.5
1,011,500	-		MMJJ_RS05435	0.65	-1.0
1,011,501	+		MMJJ_RS05435	0.65	-0.5
1,011,532	-		MMJJ_RS05435	0.67	-3.8
1,011,595	-		MMJJ_RS05435	0.71	-2.4
1,011,610	-		MMJJ_RS05435	0.72	+1.0
1,011,611	+		MMJJ_RS05435	0.72	-0.3
1,011,611	+		MMJJ_RS05435	0.72	+0.5
1,011,611	+		MMJJ_RS05435	0.72	-2.0
1,011,685	-		MMJJ_RS05435	0.77	-0.7
1,011,817	-		MMJJ_RS05435	0.85	-0.2
1,011,827	+		MMJJ_RS05435	0.86	+2.7
1,011,835	-		MMJJ_RS05435	0.86	+0.9
1,011,897	+				+1.5
1,011,968	-				-2.7
1,011,970	-				-0.5
1,011,970	-				+1.2
1,011,971	+				+2.9
1,011,971	+				+1.3
1,011,971	+				+1.4
1,011,975	+				+0.3
1,011,988	-				+1.3
1,012,018	-				+1.8
1,012,018	-				-1.3
1,012,019	+				+3.1
1,012,019	+				-1.6
1,012,046	-				-1.5
1,012,046	-				+3.2
1,012,046	-				-3.4
1,012,047	+				+0.7
1,012,068	-				+0.9
1,012,069	+				+0.5
1,012,069	+				-0.7
1,012,076	-				+1.2
1,012,077	+				-0.7
1,012,080	+				+0.8
1,012,080	+				+0.2
1,012,080	+				-3.7
1,012,080	+				-0.8
1,012,118	+				+0.1
1,012,278	+		MMJJ_RS05440	0.16	+2.1
1,012,326	-		MMJJ_RS05440	0.21	-2.0
1,012,327	+		MMJJ_RS05440	0.22	-1.6
1,012,337	+		MMJJ_RS05440	0.23	-2.7
1,012,352	-		MMJJ_RS05440	0.24	-1.1
1,012,355	+		MMJJ_RS05440	0.25	+2.1
1,012,367	+		MMJJ_RS05440	0.26	+1.3
1,012,416	-		MMJJ_RS05440	0.31	+0.4
1,012,520	-		MMJJ_RS05440	0.43	-0.2
1,012,657	-		MMJJ_RS05440	0.58	-2.3
1,012,658	+		MMJJ_RS05440	0.58	+1.7
1,012,673	+		MMJJ_RS05440	0.60	+2.6
1,012,673	+		MMJJ_RS05440	0.60	-2.0
1,012,696	-		MMJJ_RS05440	0.63	-3.7
1,012,696	-		MMJJ_RS05440	0.63	+0.3
1,012,742	-		MMJJ_RS05440	0.68	+0.4
1,012,752	-		MMJJ_RS05440	0.69	-1.6
1,012,752	-		MMJJ_RS05440	0.69	+2.9
1,012,767	+		MMJJ_RS05440	0.71	-0.2
1,012,767	+		MMJJ_RS05440	0.71	-1.8
1,012,780	-		MMJJ_RS05440	0.72	+2.1
1,012,780	-		MMJJ_RS05440	0.72	-1.5
1,012,781	+		MMJJ_RS05440	0.72	-2.6
1,012,793	-		MMJJ_RS05440	0.73	-0.3
1,012,793	-		MMJJ_RS05440	0.73	-0.7
1,012,879	-		MMJJ_RS05440	0.83	+0.1
1,012,880	+		MMJJ_RS05440	0.83	-1.4
1,012,894	-		MMJJ_RS05440	0.85	-1.7
1,012,899	-		MMJJ_RS05440	0.85	+1.8
1,012,900	+		MMJJ_RS05440	0.85	+2.3
1,012,900	+		MMJJ_RS05440	0.85	+0.1
1,012,918	-		MMJJ_RS05440	0.87	-0.2
1,012,918	-		MMJJ_RS05440	0.87	+1.9
1,012,919	+		MMJJ_RS05440	0.88	+3.1
1,012,919	+		MMJJ_RS05440	0.88	-1.2
1,012,928	-		MMJJ_RS05440	0.89	-0.4
1,012,947	-				+1.2
1,012,952	-				+3.6
1,012,982	-				+1.3
1,012,982	-				+3.7
1,012,983	+				+1.3
1,012,988	+				+1.9
1,012,989	-				+0.3
1,012,989	-				-0.2
1,012,991	-				+1.3
1,012,996	+				-0.2
1,013,009	-				+1.3
1,013,012	+				+3.0
1,013,029	+				-1.5