Strain Fitness in Pantoea sp. MT58 around IAI47_19405

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
106,555	+		IAI47_19395	0.86	+0.3
106,555	+		IAI47_19395	0.86	+1.2
106,555	+		IAI47_19395	0.86	-0.8
106,555	+		IAI47_19395	0.86	-0.6
106,556	-		IAI47_19395	0.86	-0.8
106,556	-		IAI47_19395	0.86	-1.4
106,556	-		IAI47_19395	0.86	+0.8
106,556	-		IAI47_19395	0.86	-1.0
106,564	-		IAI47_19395	0.86	+2.8
106,647	+		IAI47_19395	0.90	-1.3
106,665	+				+1.0
106,665	+				-0.6
106,666	-				-2.8
106,666	-				-0.9
106,681	+				+0.2
106,682	-				+0.1
106,682	-				-1.4
106,682	-				-0.5
106,682	-				+0.3
106,682	-				-0.0
106,704	+				+0.4
106,716	+				+1.0
106,716	+				-0.6
106,716	+				+1.3
106,717	-				-0.4
106,717	-				+0.3
106,717	-				-0.2
106,717	-				-1.5
106,717	-				-0.4
106,755	+				-1.1
106,756	-				-0.8
106,878	+				+1.2
106,999	+				-2.3
106,999	+				-0.1
107,000	-				-0.0
107,048	+		IAI47_19400	0.12	-2.0
107,048	+		IAI47_19400	0.12	+0.4
107,049	-		IAI47_19400	0.12	+2.9
107,049	-		IAI47_19400	0.12	+3.4
107,049	-		IAI47_19400	0.12	-0.3
107,049	-		IAI47_19400	0.12	+2.3
107,090	+		IAI47_19400	0.19	-1.8
107,090	+		IAI47_19400	0.19	+0.1
107,090	+		IAI47_19400	0.19	-1.4
107,090	+		IAI47_19400	0.19	+0.7
107,090	+		IAI47_19400	0.19	+0.9
107,090	+		IAI47_19400	0.19	-1.3
107,090	+		IAI47_19400	0.19	+1.6
107,091	-		IAI47_19400	0.20	-0.7
107,185	+		IAI47_19400	0.36	-0.1
107,186	-		IAI47_19400	0.36	+1.8
107,186	-		IAI47_19400	0.36	+0.2
107,195	+		IAI47_19400	0.38	+1.1
107,196	-		IAI47_19400	0.38	-0.6
107,196	-		IAI47_19400	0.38	-1.8
107,250	+		IAI47_19400	0.48	+0.3
107,251	-		IAI47_19400	0.48	+1.5
107,304	+		IAI47_19400	0.57	+2.1
107,305	-		IAI47_19400	0.57	+1.0
107,527	+				-0.7
107,527	+				-0.4
107,528	-				-0.0
107,528	-				+0.6
107,531	-				-0.8
107,547	+				+0.2
107,547	+				-0.4
107,548	-				-1.0
107,584	+				+3.4
107,584	+				-1.9
107,584	+				+0.4
107,585	-				-2.2
107,617	+				-0.2
107,630	-				+2.0
107,630	-				-0.9
107,633	+				+2.6
107,633	+				+3.0
107,633	+				-0.3
107,633	+				+0.6
107,633	+				-1.0
107,633	+				+1.4
107,633	+				+1.8
107,633	+				+0.1
107,633	+				-0.8
107,633	+				+0.6
107,633	+				+0.5
107,633	+				+2.2
107,634	-				+0.7
107,634	-				-0.8
107,634	-				+1.8
107,634	-				-1.0
107,634	-				-0.0
107,634	-				-0.7
107,634	-				+3.2
107,691	-		IAI47_19405	0.15	-1.3
107,691	-		IAI47_19405	0.15	-0.2
107,718	+		IAI47_19405	0.18	+2.0
107,718	+		IAI47_19405	0.18	+1.7
107,718	+		IAI47_19405	0.18	+0.1
107,718	+		IAI47_19405	0.18	+2.4
107,718	+		IAI47_19405	0.18	-0.9
107,718	+		IAI47_19405	0.18	+1.9
107,718	+		IAI47_19405	0.18	+2.8
107,718	+		IAI47_19405	0.18	+3.1
107,719	-		IAI47_19405	0.18	+1.0
107,719	-		IAI47_19405	0.18	+0.8
107,719	-		IAI47_19405	0.18	-1.0
107,783	+		IAI47_19405	0.24	-1.8
107,784	-		IAI47_19405	0.24	+1.8
107,813	-		IAI47_19405	0.27	+0.6
107,813	-		IAI47_19405	0.27	-1.9
107,813	-		IAI47_19405	0.27	+1.3
107,852	+		IAI47_19405	0.31	-0.4
107,852	+		IAI47_19405	0.31	+2.4
107,852	+		IAI47_19405	0.31	+2.9
107,873	-		IAI47_19405	0.34	-1.6
107,937	+		IAI47_19405	0.40	-0.8
107,937	+		IAI47_19405	0.40	+0.3
107,937	+		IAI47_19405	0.40	+0.6
107,968	+		IAI47_19405	0.43	-2.1
107,969	-		IAI47_19405	0.43	+0.2
108,062	+		IAI47_19405	0.53	+0.3
108,077	+		IAI47_19405	0.54	+4.0
108,077	+		IAI47_19405	0.54	+0.6
108,077	+		IAI47_19405	0.54	+1.3
108,077	+		IAI47_19405	0.54	+0.7
108,077	+		IAI47_19405	0.54	-0.9
108,077	+		IAI47_19405	0.54	+1.2
108,078	-		IAI47_19405	0.54	-2.0
108,078	-		IAI47_19405	0.54	-0.8
108,078	-		IAI47_19405	0.54	-1.3
108,078	-		IAI47_19405	0.54	-0.1
108,323	+		IAI47_19405	0.79	-0.2
108,323	+		IAI47_19405	0.79	+0.2
108,323	+		IAI47_19405	0.79	-0.5
108,323	+		IAI47_19405	0.79	+0.3
108,323	+		IAI47_19405	0.79	-2.2
108,323	+		IAI47_19405	0.79	+2.8
108,323	+		IAI47_19405	0.79	+0.3
108,323	+		IAI47_19405	0.79	-1.4
108,323	+		IAI47_19405	0.79	-0.6
108,324	-		IAI47_19405	0.79	-0.1
108,324	-		IAI47_19405	0.79	-0.8
108,324	-		IAI47_19405	0.79	+1.8
108,324	-		IAI47_19405	0.79	+1.0
108,324	-		IAI47_19405	0.79	+1.3
108,324	-		IAI47_19405	0.79	+0.2
108,324	-		IAI47_19405	0.79	+0.7
108,325	+		IAI47_19405	0.79	-0.8
108,331	+		IAI47_19405	0.80	-2.3
108,332	-		IAI47_19405	0.80	-0.4
108,487	+				+0.7
108,488	-				+1.1
108,556	-				-0.5
108,561	+				-0.7
108,561	+				-0.3
108,561	+				+1.2
108,561	+				+0.8
108,561	+				-0.9
108,561	+				+2.4
108,562	-				+0.6
108,562	-				+1.5
108,562	-				+1.0
108,608	+				+2.4
108,608	+				-0.0
108,609	-				+1.5
108,648	+		IAI47_19410	0.12	+1.8
108,677	+		IAI47_19410	0.15	-0.3
108,678	-		IAI47_19410	0.15	-0.4
108,678	-		IAI47_19410	0.15	-1.4
108,678	-		IAI47_19410	0.15	-0.0
108,680	+		IAI47_19410	0.15	-2.6
108,680	+		IAI47_19410	0.15	-0.0
108,680	+		IAI47_19410	0.15	+0.7
108,680	+		IAI47_19410	0.15	-0.8
108,680	+		IAI47_19410	0.15	+2.5
108,681	-		IAI47_19410	0.15	-0.4
108,681	-		IAI47_19410	0.15	+1.3
108,681	-		IAI47_19410	0.15	+0.4
108,681	-		IAI47_19410	0.15	+0.5
108,699	+		IAI47_19410	0.17	-1.4
108,715	+		IAI47_19410	0.18	+2.3
108,715	+		IAI47_19410	0.18	-0.7
108,716	-		IAI47_19410	0.18	-0.1
108,769	+		IAI47_19410	0.23	+0.6
108,770	-		IAI47_19410	0.23	-1.6
108,770	-		IAI47_19410	0.23	+0.7
108,770	-		IAI47_19410	0.23	-0.3
108,866	-		IAI47_19410	0.32	-0.2
108,873	+		IAI47_19410	0.33	+0.7
108,873	+		IAI47_19410	0.33	+0.2
108,874	-		IAI47_19410	0.33	-0.1
108,948	-		IAI47_19410	0.40	+0.2
109,111	-		IAI47_19410	0.54	+2.8
109,111	-		IAI47_19410	0.54	+1.5
109,120	+		IAI47_19410	0.55	-0.5
109,120	+		IAI47_19410	0.55	+0.6
109,151	+		IAI47_19410	0.58	+0.5
109,152	-		IAI47_19410	0.58	-0.4
109,152	-		IAI47_19410	0.58	+0.6
109,163	+		IAI47_19410	0.59	-1.5
109,163	+		IAI47_19410	0.59	+0.2
109,163	+		IAI47_19410	0.59	-1.6
109,164	-		IAI47_19410	0.59	-1.6
109,190	+		IAI47_19410	0.62	+0.8
109,257	-		IAI47_19410	0.68	-0.8
109,373	-		IAI47_19410	0.78	+0.6
109,373	-		IAI47_19410	0.78	+1.0
109,426	-		IAI47_19410	0.83	+1.2
109,426	-		IAI47_19410	0.83	-1.5
109,456	+		IAI47_19410	0.86	+0.5
109,457	-		IAI47_19410	0.86	+1.1
109,457	-		IAI47_19410	0.86	+3.1
109,526	-				-1.8
109,526	-				-0.8
109,526	-				-0.2