Strain Fitness in Pantoea sp. MT58 around IAI47_17690

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,753,976	+				+0.7
3,753,976	+				-0.3
3,753,976	+				+0.5
3,753,977	-				-0.3
3,753,993	+				-0.2
3,754,020	+				+0.0
3,754,063	-				-1.5
3,754,074	+				-1.4
3,754,074	+				-0.5
3,754,074	+				+1.4
3,754,074	+				-0.7
3,754,075	-				-0.2
3,754,113	+		IAI47_17685	0.11	-0.1
3,754,114	-		IAI47_17685	0.11	+3.0
3,754,114	-		IAI47_17685	0.11	+0.3
3,754,366	+		IAI47_17685	0.37	+0.7
3,754,366	+		IAI47_17685	0.37	+0.0
3,754,366	+		IAI47_17685	0.37	+1.2
3,754,366	+		IAI47_17685	0.37	+0.4
3,754,367	-		IAI47_17685	0.37	-1.7
3,754,424	+		IAI47_17685	0.43	-0.6
3,754,424	+		IAI47_17685	0.43	-2.0
3,754,425	-		IAI47_17685	0.43	-0.2
3,754,425	-		IAI47_17685	0.43	+0.3
3,754,613	+		IAI47_17685	0.62	-0.1
3,754,613	+		IAI47_17685	0.62	+0.5
3,754,614	-		IAI47_17685	0.62	-0.6
3,754,769	+		IAI47_17685	0.78	-0.1
3,754,770	-		IAI47_17685	0.79	+1.6
3,754,770	-		IAI47_17685	0.79	+0.6
3,754,785	+		IAI47_17685	0.80	+0.4
3,754,786	-		IAI47_17685	0.80	-0.8
3,754,786	-		IAI47_17685	0.80	-0.8
3,754,786	-		IAI47_17685	0.80	+0.3
3,754,790	+		IAI47_17685	0.81	-2.2
3,754,791	-		IAI47_17685	0.81	-0.6
3,754,860	+		IAI47_17685	0.88	+0.6
3,754,860	+		IAI47_17685	0.88	-0.3
3,754,860	+		IAI47_17685	0.88	+0.8
3,754,860	+		IAI47_17685	0.88	-0.6
3,754,860	+		IAI47_17685	0.88	-0.1
3,754,860	+		IAI47_17685	0.88	+1.6
3,754,861	-		IAI47_17685	0.88	-0.2
3,754,861	-		IAI47_17685	0.88	-0.6
3,754,904	+				-2.9
3,754,974	+				-1.2
3,754,975	-				+0.4
3,755,077	+				+1.0
3,755,077	+				+0.7
3,755,077	+				+0.3
3,755,077	+				+1.4
3,755,077	+				-0.0
3,755,078	-				-0.2
3,755,078	-				-1.2
3,755,078	-				-1.3
3,755,078	-				-2.0
3,755,078	-				+1.0
3,755,093	+				-1.3
3,755,094	-				-1.7
3,755,094	-				-1.7
3,755,094	-				+0.7
3,755,273	-		IAI47_17690	0.19	-0.6
3,755,290	+		IAI47_17690	0.21	-0.3
3,755,291	-		IAI47_17690	0.21	-1.3
3,755,291	-		IAI47_17690	0.21	-2.0
3,755,344	+		IAI47_17690	0.24	-1.2
3,755,344	+		IAI47_17690	0.24	+0.4
3,755,396	-		IAI47_17690	0.27	+0.7
3,755,398	+		IAI47_17690	0.28	+1.1
3,755,399	-		IAI47_17690	0.28	-1.2
3,755,432	+		IAI47_17690	0.30	-0.0
3,755,432	+		IAI47_17690	0.30	-1.8
3,755,433	-		IAI47_17690	0.30	-0.9
3,755,433	-		IAI47_17690	0.30	-0.5
3,755,433	-		IAI47_17690	0.30	+0.4
3,755,433	-		IAI47_17690	0.30	-1.2
3,755,434	+		IAI47_17690	0.30	+0.6
3,755,435	-		IAI47_17690	0.30	-0.7
3,755,435	-		IAI47_17690	0.30	-0.1
3,755,486	-		IAI47_17690	0.33	-0.0
3,755,486	-		IAI47_17690	0.33	-1.1
3,755,543	-		IAI47_17690	0.37	-1.0
3,755,655	+		IAI47_17690	0.44	+0.0
3,755,662	+		IAI47_17690	0.45	-0.2
3,755,662	+		IAI47_17690	0.45	-0.9
3,755,663	-		IAI47_17690	0.45	-0.6
3,755,663	-		IAI47_17690	0.45	+0.5
3,755,663	-		IAI47_17690	0.45	-0.7
3,755,765	+		IAI47_17690	0.51	-1.9
3,755,765	+		IAI47_17690	0.51	-0.2
3,755,765	+		IAI47_17690	0.51	+0.8
3,755,766	-		IAI47_17690	0.51	-1.3
3,755,766	-		IAI47_17690	0.51	+1.5
3,755,766	-		IAI47_17690	0.51	+0.8
3,755,766	-		IAI47_17690	0.51	-0.4
3,755,860	+		IAI47_17690	0.57	-1.0
3,755,861	-		IAI47_17690	0.57	-0.4
3,755,861	-		IAI47_17690	0.57	-1.2
3,755,861	-		IAI47_17690	0.57	-1.9
3,755,861	-		IAI47_17690	0.57	-0.4
3,755,947	-		IAI47_17690	0.63	-1.7
3,756,129	+		IAI47_17690	0.75	-2.4
3,756,129	+		IAI47_17690	0.75	-1.5
3,756,129	+		IAI47_17690	0.75	-0.5
3,756,130	-		IAI47_17690	0.75	-0.5
3,756,130	-		IAI47_17690	0.75	+0.1
3,756,163	+		IAI47_17690	0.77	-2.5
3,756,163	+		IAI47_17690	0.77	+1.0
3,756,163	+		IAI47_17690	0.77	-0.4
3,756,163	+		IAI47_17690	0.77	+0.2
3,756,164	-		IAI47_17690	0.77	-2.7
3,756,184	+		IAI47_17690	0.78	-1.2
3,756,184	+		IAI47_17690	0.78	-0.4
3,756,184	+		IAI47_17690	0.78	-0.7
3,756,184	+		IAI47_17690	0.78	-0.2
3,756,184	+		IAI47_17690	0.78	-0.1
3,756,184	+		IAI47_17690	0.78	+1.0
3,756,184	+		IAI47_17690	0.78	-1.7
3,756,184	+		IAI47_17690	0.78	-0.2
3,756,184	+		IAI47_17690	0.78	+0.9
3,756,184	+		IAI47_17690	0.78	-0.7
3,756,184	+		IAI47_17690	0.78	+0.3
3,756,184	+		IAI47_17690	0.78	-0.3
3,756,184	+		IAI47_17690	0.78	-0.1
3,756,184	+		IAI47_17690	0.78	-2.5
3,756,184	+		IAI47_17690	0.78	-0.1
3,756,184	+		IAI47_17690	0.78	-1.0
3,756,184	+		IAI47_17690	0.78	+0.8
3,756,185	-		IAI47_17690	0.78	+0.7
3,756,185	-		IAI47_17690	0.78	-1.2
3,756,185	-		IAI47_17690	0.78	+1.3
3,756,185	-		IAI47_17690	0.78	-2.3
3,756,185	-		IAI47_17690	0.78	+0.8
3,756,185	-		IAI47_17690	0.78	+0.7
3,756,185	-		IAI47_17690	0.78	-0.7
3,756,185	-		IAI47_17690	0.78	-0.7
3,756,185	-		IAI47_17690	0.78	+0.2
3,756,185	-		IAI47_17690	0.78	-2.2
3,756,185	-		IAI47_17690	0.78	-0.5
3,756,185	-		IAI47_17690	0.78	-2.1
3,756,185	-		IAI47_17690	0.78	-0.2
3,756,185	-		IAI47_17690	0.78	-0.2
3,756,185	-		IAI47_17690	0.78	+0.8
3,756,185	-		IAI47_17690	0.78	-2.0
3,756,185	-		IAI47_17690	0.78	+0.6
3,756,185	-		IAI47_17690	0.78	-0.1
3,756,185	-		IAI47_17690	0.78	+0.4
3,756,185	-		IAI47_17690	0.78	-2.7
3,756,185	-		IAI47_17690	0.78	-1.0
3,756,186	+		IAI47_17690	0.79	-3.2
3,756,186	+		IAI47_17690	0.79	-0.7
3,756,186	+		IAI47_17690	0.79	-0.2
3,756,186	+		IAI47_17690	0.79	-2.1
3,756,186	+		IAI47_17690	0.79	-1.4
3,756,186	+		IAI47_17690	0.79	-1.5
3,756,186	+		IAI47_17690	0.79	-0.3
3,756,186	+		IAI47_17690	0.79	+0.8
3,756,186	+		IAI47_17690	0.79	-2.0
3,756,186	+		IAI47_17690	0.79	-0.8
3,756,186	+		IAI47_17690	0.79	+0.1
3,756,186	+		IAI47_17690	0.79	-0.6
3,756,186	+		IAI47_17690	0.79	-0.5
3,756,186	+		IAI47_17690	0.79	+1.3
3,756,186	+		IAI47_17690	0.79	-1.4
3,756,186	+		IAI47_17690	0.79	-0.1
3,756,186	+		IAI47_17690	0.79	+1.0
3,756,186	+		IAI47_17690	0.79	-1.2
3,756,186	+		IAI47_17690	0.79	-0.2
3,756,186	+		IAI47_17690	0.79	-2.2
3,756,186	+		IAI47_17690	0.79	-0.2
3,756,187	-		IAI47_17690	0.79	-0.6
3,756,187	-		IAI47_17690	0.79	+0.4
3,756,187	-		IAI47_17690	0.79	-1.0
3,756,187	-		IAI47_17690	0.79	-1.6
3,756,187	-		IAI47_17690	0.79	-1.7
3,756,187	-		IAI47_17690	0.79	+0.0
3,756,187	-		IAI47_17690	0.79	-1.2
3,756,187	-		IAI47_17690	0.79	+0.3
3,756,187	-		IAI47_17690	0.79	-2.1
3,756,187	-		IAI47_17690	0.79	-0.5
3,756,187	-		IAI47_17690	0.79	-1.6
3,756,187	-		IAI47_17690	0.79	+0.2
3,756,187	-		IAI47_17690	0.79	+0.1
3,756,187	-		IAI47_17690	0.79	-2.9
3,756,199	+		IAI47_17690	0.79	-0.2
3,756,199	+		IAI47_17690	0.79	-1.2
3,756,200	-		IAI47_17690	0.79	-1.8
3,756,200	-		IAI47_17690	0.79	-0.8
3,756,200	-		IAI47_17690	0.79	+0.3
3,756,210	-		IAI47_17690	0.80	-0.4
3,756,313	+		IAI47_17690	0.87	+1.8
3,756,313	+		IAI47_17690	0.87	-0.8
3,756,313	+		IAI47_17690	0.87	+0.8
3,756,314	-		IAI47_17690	0.87	-0.1
3,756,359	-		IAI47_17690	0.90	-1.3
3,756,359	-		IAI47_17690	0.90	-0.7
3,756,359	-		IAI47_17690	0.90	+1.6
3,756,359	-		IAI47_17690	0.90	-1.4
3,756,359	-		IAI47_17690	0.90	-0.8
3,756,359	-		IAI47_17690	0.90	+0.0
3,756,427	+				-1.9
3,756,427	+				-0.7
3,756,427	+				-0.2
3,756,427	+				+0.4
3,756,427	+				-1.0
3,756,427	+				-0.9
3,756,427	+				-1.0
3,756,427	+				-1.5
3,756,427	+				+0.0
3,756,427	+				-0.2
3,756,427	+				-0.3
3,756,428	-				-0.6
3,756,428	-				-0.5
3,756,428	-				+1.0
3,756,428	-				+0.1
3,756,428	-				-0.5
3,756,428	-				-0.9
3,756,483	+				+1.5
3,756,483	+				-0.9
3,756,483	+				-1.0
3,756,483	+				-1.7
3,756,483	+				-2.8
3,756,484	-				-2.2
3,756,484	-				-1.2
3,756,484	-				-1.1
3,756,484	-				-1.1
3,756,484	-				+0.2
3,756,484	-				+0.7
3,756,511	+				+0.4
3,756,511	+				+0.5
3,756,512	-				-1.2
3,756,512	-				-1.1
3,756,591	+				-2.5
3,756,591	+				-1.2
3,756,591	+				-2.8
3,756,592	-				-0.4
3,756,592	-				-2.3
3,756,592	-				-1.1
3,756,592	-				-2.1
3,756,592	-				-1.9
3,756,608	+				-1.4
3,756,609	-				-0.3
3,756,638	+				-0.1
3,756,639	-				-0.3
3,756,639	-				-1.0
3,756,639	-				-1.0
3,756,639	-				-1.0
3,756,639	-				+0.2
3,756,642	-				-0.7
3,756,644	+				-1.6
3,756,644	+				+1.0
3,756,644	+				-1.3
3,756,644	+				-2.2
3,756,644	+				-0.5
3,756,645	-				+0.3
3,756,645	-				-2.0
3,756,645	-				-1.0
3,756,645	-				-0.7
3,756,645	-				+0.0
3,756,709	+				+3.4
3,756,746	+				+1.7
3,756,746	+				+1.5
3,756,762	+				-0.6
3,756,762	+				+3.3
3,756,763	-				+1.9
3,756,763	-				-2.2
3,756,828	-				+1.1
3,756,901	+		IAI47_17695	0.11	-0.4
3,756,987	+		IAI47_17695	0.17	+0.6
3,756,988	-		IAI47_17695	0.17	+2.3
3,757,019	+		IAI47_17695	0.19	+0.0
3,757,019	+		IAI47_17695	0.19	-0.1
3,757,019	+		IAI47_17695	0.19	+1.3
3,757,019	+		IAI47_17695	0.19	-1.4
3,757,019	+		IAI47_17695	0.19	+0.3
3,757,019	+		IAI47_17695	0.19	+2.3
3,757,019	+		IAI47_17695	0.19	-1.9
3,757,019	+		IAI47_17695	0.19	-0.9
3,757,019	+		IAI47_17695	0.19	-3.4
3,757,019	+		IAI47_17695	0.19	-0.5
3,757,019	+		IAI47_17695	0.19	+0.8
3,757,020	-		IAI47_17695	0.19	+0.2
3,757,020	-		IAI47_17695	0.19	-1.2
3,757,020	-		IAI47_17695	0.19	-1.1
3,757,020	-		IAI47_17695	0.19	-1.1
3,757,020	-		IAI47_17695	0.19	-0.7
3,757,020	-		IAI47_17695	0.19	-0.1
3,757,020	-		IAI47_17695	0.19	-0.0
3,757,020	-		IAI47_17695	0.19	+0.0
3,757,020	-		IAI47_17695	0.19	+1.1
3,757,020	-		IAI47_17695	0.19	+1.8
3,757,020	-		IAI47_17695	0.19	+0.4
3,757,173	+		IAI47_17695	0.29	-1.2
3,757,173	+		IAI47_17695	0.29	+0.8
3,757,173	+		IAI47_17695	0.29	-1.1
3,757,174	-		IAI47_17695	0.29	-2.2
3,757,174	-		IAI47_17695	0.29	+1.8
3,757,202	+		IAI47_17695	0.31	+0.7
3,757,202	+		IAI47_17695	0.31	+1.0
3,757,203	-		IAI47_17695	0.31	+1.0
3,757,203	-		IAI47_17695	0.31	+0.2
3,757,203	-		IAI47_17695	0.31	-2.7
3,757,212	+		IAI47_17695	0.32	-1.2
3,757,212	+		IAI47_17695	0.32	+0.5
3,757,212	+		IAI47_17695	0.32	-0.2
3,757,212	+		IAI47_17695	0.32	+0.7
3,757,212	+		IAI47_17695	0.32	-0.1
3,757,212	+		IAI47_17695	0.32	+0.9
3,757,212	+		IAI47_17695	0.32	+1.3
3,757,213	-		IAI47_17695	0.32	-2.3
3,757,228	-		IAI47_17695	0.33	+0.9
3,757,228	-		IAI47_17695	0.33	-0.0
3,757,228	-		IAI47_17695	0.33	+1.1
3,757,287	+		IAI47_17695	0.37	-0.7
3,757,287	+		IAI47_17695	0.37	-1.3
3,757,287	+		IAI47_17695	0.37	+0.0
3,757,288	-		IAI47_17695	0.37	-2.3
3,757,288	-		IAI47_17695	0.37	+2.2
3,757,288	-		IAI47_17695	0.37	-0.6
3,757,299	+		IAI47_17695	0.38	+0.2
3,757,299	+		IAI47_17695	0.38	-0.7
3,757,300	-		IAI47_17695	0.38	-1.2
3,757,300	-		IAI47_17695	0.38	+1.5
3,757,320	+		IAI47_17695	0.40	-1.6
3,757,344	+		IAI47_17695	0.41	+0.3
3,757,344	+		IAI47_17695	0.41	-0.4
3,757,344	+		IAI47_17695	0.41	+0.7
3,757,345	-		IAI47_17695	0.41	-1.3
3,757,345	-		IAI47_17695	0.41	-0.5
3,757,345	-		IAI47_17695	0.41	+1.3
3,757,355	+		IAI47_17695	0.42	-0.4
3,757,355	+		IAI47_17695	0.42	-0.2
3,757,355	+		IAI47_17695	0.42	+1.5
3,757,355	+		IAI47_17695	0.42	+1.1
3,757,356	-		IAI47_17695	0.42	-1.3
3,757,384	-		IAI47_17695	0.44	-0.6
3,757,384	-		IAI47_17695	0.44	-1.1
3,757,384	-		IAI47_17695	0.44	+1.5
3,757,404	+		IAI47_17695	0.45	+0.6
3,757,404	+		IAI47_17695	0.45	-1.6
3,757,405	-		IAI47_17695	0.45	+2.2
3,757,405	-		IAI47_17695	0.45	+0.4
3,757,444	+		IAI47_17695	0.48	+2.4
3,757,445	-		IAI47_17695	0.48	-0.0
3,757,480	+		IAI47_17695	0.51	-0.1
3,757,482	+		IAI47_17695	0.51	-0.5
3,757,482	+		IAI47_17695	0.51	+0.8
3,757,483	-		IAI47_17695	0.51	-0.2