Strain Fitness in Pantoea sp. MT58 around IAI47_16580

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,513,814	+		IAI47_16575	0.16	-1.8
3,513,820	+		IAI47_16575	0.17	-1.4
3,513,894	-		IAI47_16575	0.24	+1.1
3,513,897	-		IAI47_16575	0.24	-1.3
3,513,897	-		IAI47_16575	0.24	+0.5
3,513,897	-		IAI47_16575	0.24	-0.4
3,513,914	+		IAI47_16575	0.26	+1.3
3,513,914	+		IAI47_16575	0.26	-1.3
3,513,917	-		IAI47_16575	0.26	+0.8
3,513,917	-		IAI47_16575	0.26	+0.1
3,513,942	-		IAI47_16575	0.29	-0.4
3,513,944	+		IAI47_16575	0.29	-1.5
3,513,944	+		IAI47_16575	0.29	-0.7
3,513,945	-		IAI47_16575	0.29	+2.7
3,513,945	-		IAI47_16575	0.29	+1.3
3,513,948	+		IAI47_16575	0.29	+0.0
3,513,949	-		IAI47_16575	0.30	+0.6
3,513,950	+		IAI47_16575	0.30	+1.1
3,513,951	-		IAI47_16575	0.30	-1.1
3,513,958	+		IAI47_16575	0.30	-0.1
3,513,971	+		IAI47_16575	0.32	-1.5
3,513,971	+		IAI47_16575	0.32	+0.2
3,513,971	+		IAI47_16575	0.32	-1.2
3,513,972	-		IAI47_16575	0.32	+0.6
3,514,002	-		IAI47_16575	0.35	-1.1
3,514,035	-		IAI47_16575	0.38	-1.8
3,514,043	+		IAI47_16575	0.39	-1.7
3,514,043	+		IAI47_16575	0.39	+0.7
3,514,043	+		IAI47_16575	0.39	-1.0
3,514,044	-		IAI47_16575	0.39	+0.3
3,514,045	+		IAI47_16575	0.39	-0.0
3,514,045	+		IAI47_16575	0.39	-0.3
3,514,045	+		IAI47_16575	0.39	+0.5
3,514,046	-		IAI47_16575	0.39	+0.2
3,514,046	-		IAI47_16575	0.39	-1.7
3,514,046	-		IAI47_16575	0.39	-1.8
3,514,046	-		IAI47_16575	0.39	+1.1
3,514,046	-		IAI47_16575	0.39	-0.2
3,514,046	-		IAI47_16575	0.39	-0.6
3,514,047	+		IAI47_16575	0.39	-1.1
3,514,049	+		IAI47_16575	0.39	+2.7
3,514,049	+		IAI47_16575	0.39	-0.3
3,514,067	-		IAI47_16575	0.41	+1.0
3,514,076	+		IAI47_16575	0.42	-2.1
3,514,127	+		IAI47_16575	0.47	-1.4
3,514,128	-		IAI47_16575	0.47	-2.7
3,514,128	-		IAI47_16575	0.47	-2.3
3,514,129	+		IAI47_16575	0.47	-0.5
3,514,129	+		IAI47_16575	0.47	-2.8
3,514,129	+		IAI47_16575	0.47	+0.3
3,514,129	+		IAI47_16575	0.47	+2.6
3,514,130	-		IAI47_16575	0.48	-1.4
3,514,164	-		IAI47_16575	0.51	-2.2
3,514,189	+		IAI47_16575	0.53	-1.3
3,514,211	-		IAI47_16575	0.56	+1.1
3,514,219	+		IAI47_16575	0.56	+0.7
3,514,219	+		IAI47_16575	0.56	-1.1
3,514,220	-		IAI47_16575	0.56	+3.7
3,514,249	+		IAI47_16575	0.59	-0.6
3,514,252	+		IAI47_16575	0.60	-1.3
3,514,252	+		IAI47_16575	0.60	-1.0
3,514,253	-		IAI47_16575	0.60	-0.4
3,514,253	-		IAI47_16575	0.60	-0.1
3,514,277	+		IAI47_16575	0.62	-0.7
3,514,277	+		IAI47_16575	0.62	-2.1
3,514,277	+		IAI47_16575	0.62	-2.4
3,514,277	+		IAI47_16575	0.62	-1.4
3,514,278	-		IAI47_16575	0.62	-0.3
3,514,278	-		IAI47_16575	0.62	+1.8
3,514,278	-		IAI47_16575	0.62	-0.1
3,514,282	+		IAI47_16575	0.63	+1.0
3,514,282	+		IAI47_16575	0.63	-2.2
3,514,282	+		IAI47_16575	0.63	+0.3
3,514,282	+		IAI47_16575	0.63	-2.1
3,514,283	-		IAI47_16575	0.63	-0.7
3,514,295	-		IAI47_16575	0.64	+1.5
3,514,298	-		IAI47_16575	0.64	+0.3
3,514,325	-		IAI47_16575	0.67	+1.6
3,514,343	+		IAI47_16575	0.69	-1.2
3,514,343	+		IAI47_16575	0.69	+0.6
3,514,348	-		IAI47_16575	0.69	-0.6
3,514,348	-		IAI47_16575	0.69	-1.6
3,514,348	-		IAI47_16575	0.69	-2.2
3,514,348	-		IAI47_16575	0.69	+0.7
3,514,380	+		IAI47_16575	0.72	+1.1
3,514,381	-		IAI47_16575	0.72	+1.0
3,514,385	+		IAI47_16575	0.73	-0.1
3,514,409	-		IAI47_16575	0.75	+2.7
3,514,432	-		IAI47_16575	0.77	-2.7
3,514,435	+		IAI47_16575	0.78	-0.2
3,514,435	+		IAI47_16575	0.78	+0.7
3,514,436	-		IAI47_16575	0.78	-1.2
3,514,440	-		IAI47_16575	0.78	+0.9
3,514,440	-		IAI47_16575	0.78	+1.3
3,514,471	+		IAI47_16575	0.81	-0.3
3,514,471	+		IAI47_16575	0.81	+0.1
3,514,471	+		IAI47_16575	0.81	+0.8
3,514,471	+		IAI47_16575	0.81	+1.0
3,514,471	+		IAI47_16575	0.81	+3.2
3,514,471	+		IAI47_16575	0.81	-2.0
3,514,471	+		IAI47_16575	0.81	-0.3
3,514,472	-		IAI47_16575	0.81	+1.5
3,514,472	-		IAI47_16575	0.81	-0.2
3,514,472	-		IAI47_16575	0.81	-0.3
3,514,472	-		IAI47_16575	0.81	-0.5
3,514,479	-		IAI47_16575	0.82	+1.7
3,514,479	-		IAI47_16575	0.82	-0.4
3,514,489	+		IAI47_16575	0.83	+0.0
3,514,493	+		IAI47_16575	0.84	-1.1
3,514,494	-		IAI47_16575	0.84	-1.9
3,514,494	-		IAI47_16575	0.84	+0.1
3,514,506	+		IAI47_16575	0.85	+0.4
3,514,506	+		IAI47_16575	0.85	+1.3
3,514,507	-		IAI47_16575	0.85	-1.0
3,514,525	-		IAI47_16575	0.87	+0.4
3,514,525	-		IAI47_16575	0.87	+0.7
3,514,531	+		IAI47_16575	0.87	+2.1
3,514,532	-		IAI47_16575	0.87	-2.0
3,514,532	-		IAI47_16575	0.87	-0.7
3,514,532	-		IAI47_16575	0.87	-2.0
3,514,545	+		IAI47_16575	0.89	-1.0
3,514,545	+		IAI47_16575	0.89	+0.6
3,514,545	+		IAI47_16575	0.89	-0.6
3,514,545	+		IAI47_16575	0.89	+1.1
3,514,546	-		IAI47_16575	0.89	-1.4
3,514,553	+		IAI47_16575	0.89	-0.6
3,514,554	-		IAI47_16575	0.90	-1.7
3,514,554	-		IAI47_16575	0.90	-0.5
3,514,595	+				+1.1
3,514,600	+				+1.6
3,514,601	-				-1.5
3,514,601	-				+0.3
3,514,725	+				-0.2
3,514,725	+				-0.7
3,514,725	+				-0.9
3,514,726	-				-0.9
3,514,726	-				+0.1
3,514,726	-				+0.4
3,514,726	-				+0.1
3,514,728	+				-1.1
3,514,764	+				-0.5
3,514,765	-				-0.2
3,514,776	+				-0.3
3,514,777	-				-0.4
3,514,778	+				+0.2
3,514,837	+				+3.1
3,514,837	+				+1.8
3,514,837	+				+0.1
3,514,837	+				-1.4
3,514,838	-				-0.4
3,514,853	+				-0.2
3,514,912	+		IAI47_16580	0.10	-0.6
3,514,912	+		IAI47_16580	0.10	-1.9
3,514,932	+		IAI47_16580	0.12	+1.1
3,514,933	-		IAI47_16580	0.12	+0.9
3,514,933	-		IAI47_16580	0.12	+1.8
3,514,933	-		IAI47_16580	0.12	-0.2
3,514,945	+		IAI47_16580	0.13	+0.3
3,514,945	+		IAI47_16580	0.13	+2.1
3,514,946	-		IAI47_16580	0.13	+1.0
3,514,946	-		IAI47_16580	0.13	+0.2
3,514,953	-		IAI47_16580	0.14	-1.0
3,514,965	+		IAI47_16580	0.14	+0.1
3,514,965	+		IAI47_16580	0.14	-1.9
3,514,966	-		IAI47_16580	0.15	+0.4
3,514,966	-		IAI47_16580	0.15	-0.4
3,514,977	+		IAI47_16580	0.15	-0.6
3,514,977	+		IAI47_16580	0.15	+3.0
3,514,977	+		IAI47_16580	0.15	-1.1
3,514,977	+		IAI47_16580	0.15	+1.0
3,514,992	+		IAI47_16580	0.16	+0.8
3,514,993	-		IAI47_16580	0.17	+1.8
3,515,050	+		IAI47_16580	0.21	-0.7
3,515,051	-		IAI47_16580	0.21	-0.7
3,515,051	-		IAI47_16580	0.21	-2.3
3,515,051	-		IAI47_16580	0.21	-1.5
3,515,096	+		IAI47_16580	0.24	-1.7
3,515,097	-		IAI47_16580	0.24	-1.9
3,515,097	-		IAI47_16580	0.24	+2.2
3,515,097	-		IAI47_16580	0.24	-0.8
3,515,097	-		IAI47_16580	0.24	+1.1
3,515,113	+		IAI47_16580	0.26	-0.1
3,515,113	+		IAI47_16580	0.26	-0.3
3,515,119	+		IAI47_16580	0.26	+1.1
3,515,120	-		IAI47_16580	0.26	+0.2
3,515,185	+		IAI47_16580	0.31	-1.5
3,515,186	-		IAI47_16580	0.31	+0.3
3,515,186	-		IAI47_16580	0.31	+1.2
3,515,186	-		IAI47_16580	0.31	-1.4
3,515,191	+		IAI47_16580	0.32	-0.6
3,515,192	-		IAI47_16580	0.32	-0.6
3,515,192	-		IAI47_16580	0.32	-2.6
3,515,337	+		IAI47_16580	0.43	+0.0
3,515,337	+		IAI47_16580	0.43	-1.5
3,515,337	+		IAI47_16580	0.43	-0.6
3,515,337	+				-1.0
3,515,337	+		IAI47_16580	0.43	-0.4
3,515,337	+		IAI47_16580	0.43	+0.4
3,515,338	-		IAI47_16580	0.43	-2.1
3,515,338	-		IAI47_16580	0.43	-0.9
3,515,347	+		IAI47_16580	0.43	-0.3
3,515,347	+		IAI47_16580	0.43	+0.6
3,515,347	+		IAI47_16580	0.43	-0.3
3,515,347	+		IAI47_16580	0.43	-0.5
3,515,347	+		IAI47_16580	0.43	-0.0
3,515,347	+		IAI47_16580	0.43	-1.6
3,515,347	+		IAI47_16580	0.43	+0.5
3,515,347	+		IAI47_16580	0.43	-0.6
3,515,347	+		IAI47_16580	0.43	-1.0
3,515,347	+		IAI47_16580	0.43	+0.4
3,515,347	+		IAI47_16580	0.43	+1.0
3,515,347	+		IAI47_16580	0.43	+0.1
3,515,348	-		IAI47_16580	0.44	-0.3
3,515,348	-		IAI47_16580	0.44	+0.2
3,515,348	-		IAI47_16580	0.44	-0.3
3,515,348	-		IAI47_16580	0.44	+1.7
3,515,348	-		IAI47_16580	0.44	+0.7
3,515,348	-		IAI47_16580	0.44	+0.6
3,515,348	-		IAI47_16580	0.44	+1.4
3,515,348	-		IAI47_16580	0.44	-1.2
3,515,348	-		IAI47_16580	0.44	-0.4
3,515,348	-		IAI47_16580	0.44	-0.2
3,515,348	-		IAI47_16580	0.44	+1.7
3,515,348	-		IAI47_16580	0.44	+2.6
3,515,348	-		IAI47_16580	0.44	-0.1
3,515,348	-		IAI47_16580	0.44	+2.5
3,515,404	+		IAI47_16580	0.48	+3.0
3,515,404	+		IAI47_16580	0.48	-0.6
3,515,404	+		IAI47_16580	0.48	-1.9
3,515,405	-		IAI47_16580	0.48	-1.1
3,515,424	-		IAI47_16580	0.49	+1.7
3,515,424	-		IAI47_16580	0.49	-0.5
3,515,424	-		IAI47_16580	0.49	-0.4
3,515,431	+		IAI47_16580	0.50	+0.1
3,515,431	+		IAI47_16580	0.50	-1.4
3,515,438	+		IAI47_16580	0.50	+1.4
3,515,438	+		IAI47_16580	0.50	+1.7
3,515,439	-		IAI47_16580	0.50	+0.1
3,515,441	+		IAI47_16580	0.51	+0.9
3,515,441	+		IAI47_16580	0.51	-1.5
3,515,441	+		IAI47_16580	0.51	-1.0
3,515,441	+		IAI47_16580	0.51	-1.1
3,515,441	+		IAI47_16580	0.51	+0.4
3,515,441	+		IAI47_16580	0.51	-0.0
3,515,442	-		IAI47_16580	0.51	+0.9
3,515,442	-		IAI47_16580	0.51	-2.1
3,515,442	-		IAI47_16580	0.51	+0.3
3,515,442	-		IAI47_16580	0.51	+1.4
3,515,442	-		IAI47_16580	0.51	-0.1
3,515,442	-		IAI47_16580	0.51	+0.7
3,515,442	-		IAI47_16580	0.51	+1.7
3,515,442	-		IAI47_16580	0.51	+0.6
3,515,444	+		IAI47_16580	0.51	+1.0
3,515,444	+		IAI47_16580	0.51	-0.4
3,515,444	+		IAI47_16580	0.51	+0.0
3,515,444	+		IAI47_16580	0.51	+1.8
3,515,444	+		IAI47_16580	0.51	+0.4
3,515,444	+		IAI47_16580	0.51	+2.9
3,515,444	+		IAI47_16580	0.51	+0.3
3,515,445	-		IAI47_16580	0.51	+2.1
3,515,445	-		IAI47_16580	0.51	-1.5
3,515,445	-		IAI47_16580	0.51	-1.0
3,515,445	-		IAI47_16580	0.51	-1.1
3,515,445	-		IAI47_16580	0.51	-0.6
3,515,495	+		IAI47_16580	0.55	+0.8
3,515,496	-		IAI47_16580	0.55	-1.4
3,515,524	-		IAI47_16580	0.57	-0.1
3,515,573	+		IAI47_16580	0.61	-0.4
3,515,574	-		IAI47_16580	0.61	+3.0
3,515,630	+		IAI47_16580	0.65	-0.6
3,515,630	+		IAI47_16580	0.65	+2.3
3,515,630	+		IAI47_16580	0.65	+0.5
3,515,630	+		IAI47_16580	0.65	-1.7
3,515,630	+		IAI47_16580	0.65	+0.7
3,515,630	+		IAI47_16580	0.65	+1.0
3,515,630	+		IAI47_16580	0.65	-0.9
3,515,630	+		IAI47_16580	0.65	+1.6
3,515,630	+		IAI47_16580	0.65	-2.0
3,515,630	+		IAI47_16580	0.65	+1.4
3,515,630	+		IAI47_16580	0.65	+0.0
3,515,630	+		IAI47_16580	0.65	-0.1
3,515,630	+		IAI47_16580	0.65	-0.9
3,515,630	+		IAI47_16580	0.65	-1.2
3,515,630	+		IAI47_16580	0.65	-1.4
3,515,630	+		IAI47_16580	0.65	+1.7
3,515,630	+		IAI47_16580	0.65	+2.4
3,515,630	+		IAI47_16580	0.65	-0.4
3,515,630	+		IAI47_16580	0.65	+1.5
3,515,630	+		IAI47_16580	0.65	-0.3
3,515,630	+		IAI47_16580	0.65	+1.8
3,515,631	-		IAI47_16580	0.65	-1.0
3,515,631	-		IAI47_16580	0.65	-0.9
3,515,631	-		IAI47_16580	0.65	-1.4
3,515,631	-		IAI47_16580	0.65	-1.2
3,515,631	-		IAI47_16580	0.65	-0.9
3,515,631	-		IAI47_16580	0.65	+0.9
3,515,631	-		IAI47_16580	0.65	-1.4
3,515,631	-		IAI47_16580	0.65	-1.5
3,515,631	-		IAI47_16580	0.65	-0.5
3,515,631	-		IAI47_16580	0.65	-0.8
3,515,631	-		IAI47_16580	0.65	+2.2
3,515,632	+		IAI47_16580	0.65	-0.1
3,515,632	+		IAI47_16580	0.65	+1.1
3,515,632	+		IAI47_16580	0.65	-1.0
3,515,632	+		IAI47_16580	0.65	+0.4
3,515,632	+		IAI47_16580	0.65	-2.1
3,515,632	+		IAI47_16580	0.65	-1.4
3,515,633	-		IAI47_16580	0.65	-3.6
3,515,633	-		IAI47_16580	0.65	+1.3
3,515,633	-		IAI47_16580	0.65	-0.7
3,515,633	-		IAI47_16580	0.65	-0.3
3,515,634	+		IAI47_16580	0.65	+2.8
3,515,634	+		IAI47_16580	0.65	-0.4
3,515,634	+		IAI47_16580	0.65	+0.3
3,515,634	+		IAI47_16580	0.65	+0.2
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