Strain Fitness in Pantoea sp. MT58 around IAI47_15295

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,222,959	+		IAI47_15290	0.30	-0.1
3,222,959	+		IAI47_15290	0.30	+0.7
3,223,120	+		IAI47_15290	0.41	+1.2
3,223,120	+		IAI47_15290	0.41	+2.5
3,223,121	-		IAI47_15290	0.41	+1.3
3,223,226	+		IAI47_15290	0.49	-2.3
3,223,226	+		IAI47_15290	0.49	-1.0
3,223,226	+		IAI47_15290	0.49	-1.4
3,223,226	+		IAI47_15290	0.49	-0.0
3,223,227	-		IAI47_15290	0.49	+0.2
3,223,227	-		IAI47_15290	0.49	-1.1
3,223,227	-		IAI47_15290	0.49	-1.1
3,223,465	+		IAI47_15290	0.66	-1.6
3,223,465	+		IAI47_15290	0.66	+3.0
3,223,465	+		IAI47_15290	0.66	-0.4
3,223,466	-		IAI47_15290	0.66	-0.6
3,223,466	-		IAI47_15290	0.66	+1.8
3,223,496	+		IAI47_15290	0.68	-0.2
3,223,496	+		IAI47_15290	0.68	-0.8
3,223,496	+		IAI47_15290	0.68	-0.7
3,223,497	-		IAI47_15290	0.68	+0.7
3,223,497	-		IAI47_15290	0.68	+1.9
3,223,564	+		IAI47_15290	0.73	-0.1
3,223,586	+		IAI47_15290	0.74	-1.8
3,223,586	+		IAI47_15290	0.74	+1.1
3,223,586	+		IAI47_15290	0.74	-0.7
3,223,586	+		IAI47_15290	0.74	-0.0
3,223,586	+		IAI47_15290	0.74	+1.1
3,223,586	+		IAI47_15290	0.74	-1.8
3,223,587	-		IAI47_15290	0.75	+0.4
3,223,587	-		IAI47_15290	0.75	-2.6
3,223,587	-		IAI47_15290	0.75	+0.3
3,223,587	-		IAI47_15290	0.75	-1.3
3,223,587	-		IAI47_15290	0.75	-0.9
3,223,690	+		IAI47_15290	0.82	+2.6
3,223,690	+		IAI47_15290	0.82	-0.3
3,223,694	-		IAI47_15290	0.82	-1.3
3,223,694	-		IAI47_15290	0.82	-1.2
3,223,796	-		IAI47_15290	0.89	-0.4
3,223,796	-		IAI47_15290	0.89	+2.6
3,223,796	-		IAI47_15290	0.89	-1.6
3,223,836	+				+2.3
3,223,837	-				-0.8
3,223,837	-				+1.8
3,223,837	-				-0.4
3,223,859	-				-1.5
3,223,859	-				-0.2
3,223,859	-				+0.3
3,223,872	+				+0.6
3,223,872	+				+0.7
3,223,873	-				-0.0
3,223,873	-				-1.3
3,223,873	-				-0.2
3,223,875	+				+0.4
3,223,875	+				+1.4
3,223,876	-				-0.6
3,223,876	-				-0.4
3,223,909	+				+2.5
3,223,910	-				-1.6
3,223,910	-				+1.0
3,223,910	-				+0.4
3,223,910	-				+1.1
3,223,910	-				+1.2
3,223,910	-				+1.3
3,223,910	-				-0.4
3,223,927	+				+0.3
3,223,927	+				-0.4
3,223,928	-				+0.3
3,223,956	+				+0.3
3,223,956	+				-0.9
3,223,962	-				-0.5
3,223,962	-				-2.5
3,223,982	+		IAI47_15295	0.10	-0.7
3,223,996	+		IAI47_15295	0.14	-0.8
3,223,997	-		IAI47_15295	0.14	+0.4
3,224,099	-		IAI47_15295	0.41	-0.5
3,224,099	-		IAI47_15295	0.41	-0.1
3,224,179	-		IAI47_15295	0.62	+0.3
3,224,179	-		IAI47_15295	0.62	-0.1
3,224,197	+		IAI47_15295	0.67	-0.8
3,224,197	+		IAI47_15295	0.67	+0.8
3,224,198	-		IAI47_15295	0.67	-0.6
3,224,238	+		IAI47_15295	0.78	+0.6
3,224,239	-		IAI47_15295	0.78	-0.5
3,224,374	+				+2.3
3,224,374	+				-0.6
3,224,374	+				+0.6
3,224,374	+				-1.3
3,224,374	+				+2.6
3,224,375	-				+0.3
3,224,375	-				+1.2
3,224,557	+		IAI47_15300	0.19	+0.4
3,224,557	+		IAI47_15300	0.19	-0.4
3,224,558	-		IAI47_15300	0.19	+0.2
3,224,558	-		IAI47_15300	0.19	-0.4
3,224,558	-		IAI47_15300	0.19	-1.6
3,224,558	-		IAI47_15300	0.19	+0.7
3,224,558	-		IAI47_15300	0.19	-2.0
3,224,558	-		IAI47_15300	0.19	-0.5
3,224,558	-		IAI47_15300	0.19	+0.2
3,224,584	+		IAI47_15300	0.22	+1.4
3,224,584	+		IAI47_15300	0.22	+2.1
3,224,584	+		IAI47_15300	0.22	+0.6
3,224,585	-		IAI47_15300	0.22	+0.7
3,224,585	-		IAI47_15300	0.22	-1.3
3,224,585	-		IAI47_15300	0.22	-3.2
3,224,585	-		IAI47_15300	0.22	+0.3
3,224,610	-		IAI47_15300	0.25	-0.7
3,224,610	-		IAI47_15300	0.25	-1.2
3,224,610	-		IAI47_15300	0.25	+3.1
3,224,610	-		IAI47_15300	0.25	+2.1
3,224,636	+		IAI47_15300	0.28	-1.9
3,224,636	+		IAI47_15300	0.28	-0.8
3,224,636	+		IAI47_15300	0.28	+1.8
3,224,637	-		IAI47_15300	0.28	+1.3
3,224,656	+		IAI47_15300	0.30	-1.7
3,224,656	+		IAI47_15300	0.30	-0.4
3,224,656	+		IAI47_15300	0.30	-2.2
3,224,657	-		IAI47_15300	0.30	+0.3
3,224,657	-		IAI47_15300	0.30	-2.0
3,224,657	-		IAI47_15300	0.30	-0.0
3,224,679	+		IAI47_15300	0.32	+0.6
3,224,680	-		IAI47_15300	0.32	+3.0
3,224,680	-		IAI47_15300	0.32	+2.6
3,224,699	+		IAI47_15300	0.34	-0.4
3,224,699	+		IAI47_15300	0.34	-1.9
3,224,700	-		IAI47_15300	0.34	-1.1
3,224,700	-		IAI47_15300	0.34	-0.2
3,224,700	-		IAI47_15300	0.34	-0.6
3,224,700	-		IAI47_15300	0.34	-2.9
3,224,731	+		IAI47_15300	0.38	+0.0
3,224,731	+		IAI47_15300	0.38	+0.8
3,224,731	+		IAI47_15300	0.38	+1.2
3,224,732	-		IAI47_15300	0.38	+0.2
3,224,734	+		IAI47_15300	0.38	-0.9
3,224,735	-		IAI47_15300	0.38	-2.4
3,224,746	+		IAI47_15300	0.39	-1.0
3,224,746	+		IAI47_15300	0.39	-1.7
3,224,746	+		IAI47_15300	0.39	-0.4
3,224,746	+		IAI47_15300	0.39	-1.0
3,224,746	+		IAI47_15300	0.39	-0.7
3,224,747	-		IAI47_15300	0.39	-0.4
3,224,747	-		IAI47_15300	0.39	+1.0
3,224,806	+		IAI47_15300	0.45	-0.4
3,224,806	+		IAI47_15300	0.45	+1.2
3,224,807	-		IAI47_15300	0.45	+0.5
3,224,807	-		IAI47_15300	0.45	-1.7
3,224,807	-		IAI47_15300	0.45	+0.3
3,224,864	+		IAI47_15300	0.51	+0.9
3,224,864	+		IAI47_15300	0.51	-0.2
3,224,864	+		IAI47_15300	0.51	-0.8
3,224,864	+		IAI47_15300	0.51	-0.9
3,224,864	+		IAI47_15300	0.51	-0.9
3,224,864	+		IAI47_15300	0.51	-1.5
3,224,865	-		IAI47_15300	0.52	-0.2
3,224,865	-		IAI47_15300	0.52	+1.0
3,224,865	-		IAI47_15300	0.52	+1.3
3,224,899	+		IAI47_15300	0.55	+1.0
3,224,935	+		IAI47_15300	0.59	-1.7
3,224,935	+		IAI47_15300	0.59	-1.9
3,224,935	+		IAI47_15300	0.59	-0.8
3,224,935	+		IAI47_15300	0.59	+1.4
3,224,935	+		IAI47_15300	0.59	+0.0
3,224,936	-		IAI47_15300	0.59	-2.3
3,225,067	+		IAI47_15300	0.73	-0.8
3,225,067	+		IAI47_15300	0.73	+0.3
3,225,068	-		IAI47_15300	0.73	-0.8
3,225,073	+		IAI47_15300	0.73	-0.2
3,225,073	+		IAI47_15300	0.73	+0.8
3,225,074	-		IAI47_15300	0.73	+2.0
3,225,074	-		IAI47_15300	0.73	+0.2
3,225,104	+		IAI47_15300	0.77	-1.2
3,225,104	+		IAI47_15300	0.77	-1.2
3,225,104	+		IAI47_15300	0.77	-0.7
3,225,104	+		IAI47_15300	0.77	-0.6
3,225,104	+		IAI47_15300	0.77	+0.1
3,225,105	-		IAI47_15300	0.77	+1.0
3,225,106	+		IAI47_15300	0.77	-2.4
3,225,106	+		IAI47_15300	0.77	+0.1
3,225,106	+		IAI47_15300	0.77	+1.6
3,225,107	-		IAI47_15300	0.77	-2.2
3,225,107	-		IAI47_15300	0.77	+1.8
3,225,107	-		IAI47_15300	0.77	-1.3
3,225,107	-		IAI47_15300	0.77	+0.6
3,225,107	-		IAI47_15300	0.77	-1.0
3,225,191	-		IAI47_15300	0.86	-1.2
3,225,268	-				+0.2
3,225,281	-				-1.3
3,225,298	+				-0.1
3,225,299	-				-0.6