Strain Fitness in Pantoea sp. MT58 around IAI47_13290

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,810,282	+		IAI47_13285	0.20	-1.0
2,810,283	-		IAI47_13285	0.20	+0.4
2,810,360	+		IAI47_13285	0.27	+0.2
2,810,360	+		IAI47_13285	0.27	-0.5
2,810,361	-		IAI47_13285	0.27	+0.8
2,810,406	-		IAI47_13285	0.31	-0.3
2,810,511	+		IAI47_13285	0.40	+0.4
2,810,512	-		IAI47_13285	0.40	+0.6
2,810,512	-		IAI47_13285	0.40	+2.6
2,810,559	-		IAI47_13285	0.44	-0.9
2,810,601	-		IAI47_13285	0.48	-1.7
2,810,601	-		IAI47_13285	0.48	+2.3
2,810,601	-		IAI47_13285	0.48	-2.3
2,810,613	-		IAI47_13285	0.49	+0.5
2,810,751	+		IAI47_13285	0.61	+1.7
2,810,751	+		IAI47_13285	0.61	-1.1
2,810,751	+		IAI47_13285	0.61	-1.0
2,810,752	-		IAI47_13285	0.61	-0.1
2,810,752	-		IAI47_13285	0.61	-0.2
2,810,789	+		IAI47_13285	0.64	-2.4
2,810,789	+		IAI47_13285	0.64	-0.6
2,810,789	+		IAI47_13285	0.64	-0.3
2,810,790	-		IAI47_13285	0.64	-0.7
2,810,790	-		IAI47_13285	0.64	-0.6
2,810,790	-		IAI47_13285	0.64	-0.6
2,810,790	-		IAI47_13285	0.64	-0.8
2,810,790	-		IAI47_13285	0.64	-1.5
2,811,069	+		IAI47_13285	0.88	-0.8
2,811,069	+		IAI47_13285	0.88	+0.3
2,811,069	+		IAI47_13285	0.88	-0.2
2,811,070	-		IAI47_13285	0.88	-2.1
2,811,070	-		IAI47_13285	0.88	-2.8
2,811,112	+				+0.3
2,811,116	+				-0.6
2,811,116	+				-0.2
2,811,116	+				-1.0
2,811,117	-				+1.9
2,811,117	-				+0.1
2,811,126	+				-0.6
2,811,126	+				+0.2
2,811,126	+				-0.4
2,811,447	+		IAI47_13290	0.25	+1.5
2,811,447	+		IAI47_13290	0.25	-1.6
2,811,447	+		IAI47_13290	0.25	+0.3
2,811,447	+		IAI47_13290	0.25	+0.0
2,811,448	-		IAI47_13290	0.25	+1.4
2,811,448	-		IAI47_13290	0.25	+1.0
2,811,448	-		IAI47_13290	0.25	-1.9
2,811,479	+		IAI47_13290	0.28	+2.0
2,811,508	+		IAI47_13290	0.31	-1.7
2,811,557	+		IAI47_13290	0.36	+0.1
2,811,557	+		IAI47_13290	0.36	-0.5
2,811,557	+		IAI47_13290	0.36	-0.1
2,811,557	+		IAI47_13290	0.36	+0.4
2,811,557	+		IAI47_13290	0.36	-1.1
2,811,557	+		IAI47_13290	0.36	+0.1
2,811,558	-		IAI47_13290	0.36	-1.0
2,811,558	-		IAI47_13290	0.36	+0.5
2,811,558	-		IAI47_13290	0.36	-1.0
2,811,630	+		IAI47_13290	0.44	-2.3
2,811,630	+		IAI47_13290	0.44	+1.1
2,811,630	+		IAI47_13290	0.44	+0.0
2,811,630	+		IAI47_13290	0.44	-0.5
2,811,630	+		IAI47_13290	0.44	+0.4
2,811,630	+		IAI47_13290	0.44	+0.7
2,811,630	+		IAI47_13290	0.44	-1.5
2,811,631	-		IAI47_13290	0.44	-1.5
2,811,631	-		IAI47_13290	0.44	-2.5
2,811,631	-		IAI47_13290	0.44	-1.3
2,811,631	-		IAI47_13290	0.44	-0.6
2,811,631	-		IAI47_13290	0.44	-1.7
2,811,631	-		IAI47_13290	0.44	+0.6
2,811,631	-		IAI47_13290	0.44	+1.1
2,811,631	-		IAI47_13290	0.44	-1.0
2,811,706	-		IAI47_13290	0.51	+0.7
2,811,708	+		IAI47_13290	0.52	+0.3
2,811,708	+		IAI47_13290	0.52	+0.1
2,811,708	+		IAI47_13290	0.52	-1.1
2,811,709	-		IAI47_13290	0.52	+1.3
2,811,711	+		IAI47_13290	0.52	-2.0
2,811,711	+		IAI47_13290	0.52	-1.6
2,811,711	+		IAI47_13290	0.52	+0.2
2,811,711	+		IAI47_13290	0.52	-0.1
2,811,711	+		IAI47_13290	0.52	+0.6
2,811,712	-		IAI47_13290	0.52	+0.1
2,811,712	-		IAI47_13290	0.52	-0.8
2,811,712	-		IAI47_13290	0.52	+0.6
2,811,712	-		IAI47_13290	0.52	-0.5
2,811,772	+		IAI47_13290	0.58	-1.5
2,811,772	+		IAI47_13290	0.58	+0.0
2,811,772	+		IAI47_13290	0.58	-1.7
2,811,773	-		IAI47_13290	0.58	-2.2
2,811,773	-		IAI47_13290	0.58	+0.4
2,811,808	-		IAI47_13290	0.62	-0.5
2,811,808	-		IAI47_13290	0.62	-0.4
2,811,835	+		IAI47_13290	0.65	-1.3
2,811,835	+		IAI47_13290	0.65	-0.3
2,811,835	+		IAI47_13290	0.65	+1.2
2,811,835	+		IAI47_13290	0.65	+1.5
2,811,836	-		IAI47_13290	0.65	-0.2
2,811,836	-		IAI47_13290	0.65	+0.4
2,811,836	-		IAI47_13290	0.65	-0.4
2,811,836	-		IAI47_13290	0.65	-1.9
2,811,836	-		IAI47_13290	0.65	+1.7
2,811,836	-		IAI47_13290	0.65	-0.3
2,811,914	+		IAI47_13290	0.73	+1.3
2,811,915	-		IAI47_13290	0.73	-0.7
2,811,915	-		IAI47_13290	0.73	-1.0
2,811,915	-		IAI47_13290	0.73	-0.3
2,811,989	+		IAI47_13290	0.81	-2.0
2,811,989	+		IAI47_13290	0.81	-0.2
2,811,990	-		IAI47_13290	0.81	+0.5
2,811,990	-		IAI47_13290	0.81	-1.2
2,812,027	-		IAI47_13290	0.85	+0.5
2,812,027	-		IAI47_13290	0.85	+0.1
2,812,027	-		IAI47_13290	0.85	+0.8
2,812,027	-		IAI47_13290	0.85	-0.7
2,812,091	+				+1.2
2,812,091	+				-1.1
2,812,092	-				+0.2
2,812,092	-				+2.3
2,812,092	-				-1.1
2,812,155	+				+0.2
2,812,156	-				-0.7
2,812,156	-				+0.9
2,812,164	+				+0.9
2,812,191	+				+0.2
2,812,192	-				-1.8
2,812,318	-				-0.9
2,812,320	+				-0.8
2,812,360	+				-1.1
2,812,360	+				-2.9
2,812,360	+				-1.4
2,812,360	+				+0.3
2,812,361	-				+1.4
2,812,361	-				-1.9
2,812,364	+				-0.9
2,812,478	+		IAI47_13295	0.13	-0.5
2,812,479	-		IAI47_13295	0.13	-2.0
2,812,479	-		IAI47_13295	0.13	+1.4
2,812,479	-		IAI47_13295	0.13	-1.6
2,812,479	-		IAI47_13295	0.13	-0.6
2,812,503	+		IAI47_13295	0.14	+0.2
2,812,541	+		IAI47_13295	0.16	-0.1
2,812,541	+		IAI47_13295	0.16	-2.1
2,812,541	+		IAI47_13295	0.16	+0.3
2,812,541	+		IAI47_13295	0.16	-0.2
2,812,541	+		IAI47_13295	0.16	-0.7
2,812,542	-		IAI47_13295	0.16	+0.0
2,812,610	+		IAI47_13295	0.19	+1.9
2,812,611	-		IAI47_13295	0.19	+1.2
2,812,884	+		IAI47_13295	0.31	+0.5
2,812,884	+		IAI47_13295	0.31	+1.6
2,812,884	+		IAI47_13295	0.31	-0.9
2,812,884	+		IAI47_13295	0.31	-0.3
2,812,884	+		IAI47_13295	0.31	-2.2
2,812,884	+		IAI47_13295	0.31	-2.0
2,812,885	-		IAI47_13295	0.31	+1.8
2,812,885	-		IAI47_13295	0.31	-1.7
2,812,885	-		IAI47_13295	0.31	-0.0
2,812,885	-		IAI47_13295	0.31	-0.0
2,812,885	-		IAI47_13295	0.31	+0.8
2,812,885	-		IAI47_13295	0.31	+1.3
2,812,892	+		IAI47_13295	0.32	+1.9
2,812,893	-		IAI47_13295	0.32	+0.3
2,812,893	-		IAI47_13295	0.32	-2.3