Strain Fitness in Pantoea sp. MT58 around IAI47_10760

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,273,250	+		IAI47_10750	0.52	-0.5
2,273,250	+		IAI47_10750	0.52	-1.3
2,273,251	-		IAI47_10750	0.52	+0.8
2,273,251	-		IAI47_10750	0.52	-0.5
2,273,251	-		IAI47_10750	0.52	-1.1
2,273,364	+		IAI47_10750	0.65	-0.9
2,273,365	-		IAI47_10750	0.65	-1.6
2,273,384	+		IAI47_10750	0.67	-2.2
2,273,384	+		IAI47_10750	0.67	+0.1
2,273,385	-		IAI47_10750	0.67	+0.7
2,273,385	-		IAI47_10750	0.67	+1.7
2,273,385	-		IAI47_10750	0.67	+0.3
2,273,507	+		IAI47_10750	0.81	-0.6
2,273,508	-		IAI47_10750	0.81	-0.9
2,273,508	-		IAI47_10750	0.81	-0.3
2,273,516	+		IAI47_10750	0.82	+1.2
2,273,517	-		IAI47_10750	0.82	-1.7
2,273,517	-		IAI47_10750	0.82	+0.8
2,273,517	-		IAI47_10750	0.82	-0.3
2,273,517	-		IAI47_10750	0.82	-1.9
2,273,541	+		IAI47_10750	0.85	+0.5
2,273,542	-		IAI47_10750	0.85	-0.3
2,273,542	-		IAI47_10750	0.85	-0.7
2,273,542	-		IAI47_10750	0.85	-0.8
2,273,542	-		IAI47_10750	0.85	-0.3
2,273,568	+		IAI47_10750	0.88	-0.2
2,273,618	+				+0.0
2,273,674	+				+1.9
2,273,674	+				-1.3
2,273,674	+				-1.2
2,273,674	+				-0.2
2,273,674	+				+3.4
2,273,675	-				-1.8
2,273,707	+				+0.6
2,273,707	+				+3.6
2,273,708	-				+0.3
2,273,708	-				-1.6
2,273,711	+				+0.8
2,273,711	+				-0.5
2,273,711	+				-0.2
2,273,712	-				-2.3
2,273,712	-				-0.6
2,273,712	-				-0.0
2,273,712	-				-1.1
2,273,726	+				+0.5
2,273,726	+				-0.4
2,273,727	-				-1.1
2,273,728	+				-1.2
2,273,728	+				-0.2
2,273,754	+				-1.1
2,273,754	+				-2.5
2,273,754	+				-0.4
2,273,754	+				+2.2
2,273,755	-				-1.4
2,273,755	-				-1.1
2,273,755	-				+0.1
2,273,862	-		IAI47_10755	0.47	-1.2
2,273,898	+		IAI47_10755	0.62	+0.9
2,274,005	+				-1.0
2,274,006	-				-0.1
2,274,010	-				-0.1
2,274,010	-				+1.1
2,274,040	-				+0.4
2,274,080	+				+1.2
2,274,081	-				-1.3
2,274,155	+				+0.8
2,274,156	-				+1.6
2,274,156	-				-1.0
2,274,176	+				+3.2
2,274,176	+				+0.9
2,274,176	+				+1.8
2,274,177	-				-0.7
2,274,177	-				-0.2
2,274,191	+				+0.2
2,274,191	+				+0.6
2,274,192	-				+0.0
2,274,192	-				+0.1
2,274,192	-				+0.5
2,274,309	+		IAI47_10760	0.23	-1.9
2,274,309	+		IAI47_10760	0.23	+2.7
2,274,309	+		IAI47_10760	0.23	-0.2
2,274,309	+		IAI47_10760	0.23	+1.0
2,274,309	+		IAI47_10760	0.23	+0.2
2,274,310	-		IAI47_10760	0.23	+0.3
2,274,310	-		IAI47_10760	0.23	+0.2
2,274,310	-		IAI47_10760	0.23	+0.1
2,274,310	-		IAI47_10760	0.23	+0.2
2,274,310	-		IAI47_10760	0.23	+0.7
2,274,310	-		IAI47_10760	0.23	+0.2
2,274,312	+		IAI47_10760	0.24	+0.0
2,274,312	+		IAI47_10760	0.24	+2.7
2,274,313	-		IAI47_10760	0.24	-0.2
2,274,315	+		IAI47_10760	0.24	+1.2
2,274,315	+		IAI47_10760	0.24	+1.2
2,274,316	-		IAI47_10760	0.24	-0.8
2,274,326	+		IAI47_10760	0.26	+0.5
2,274,360	+		IAI47_10760	0.32	+1.3
2,274,360	+		IAI47_10760	0.32	+0.7
2,274,361	-		IAI47_10760	0.32	-0.0
2,274,361	-		IAI47_10760	0.32	+0.8
2,274,482	+		IAI47_10760	0.52	-0.9
2,274,482	+		IAI47_10760	0.52	-1.5
2,274,482	+		IAI47_10760	0.52	-0.2
2,274,483	-		IAI47_10760	0.52	-0.8
2,274,483	-		IAI47_10760	0.52	+0.8
2,274,483	-		IAI47_10760	0.52	+0.8
2,274,501	-		IAI47_10760	0.55	-1.0
2,274,517	+		IAI47_10760	0.58	+0.2
2,274,517	+		IAI47_10760	0.58	+2.2
2,274,517	+		IAI47_10760	0.58	+1.5
2,274,517	+		IAI47_10760	0.58	+0.3
2,274,518	-		IAI47_10760	0.58	-0.4
2,274,658	+		IAI47_10760	0.82	+0.2
2,274,658	+		IAI47_10760	0.82	+0.7
2,274,659	-		IAI47_10760	0.82	-1.3
2,274,659	-		IAI47_10760	0.82	+0.0
2,274,755	+				-1.0
2,274,755	+				-0.5
2,274,755	+				-1.7
2,274,755	+				+0.0
2,274,755	+				-0.3
2,274,755	+				+1.0
2,274,756	-				+2.6
2,274,756	-				+0.2
2,274,756	-				+0.5
2,274,788	-				-2.2
2,274,814	+				+0.4
2,274,814	+				+2.8
2,274,814	+				+0.3
2,274,814	+				-1.0
2,274,814	+				+1.1
2,274,814	+				-1.3
2,274,815	-				+0.8
2,274,815	-				+1.0
2,274,815	-				+0.8
2,274,815	-				-1.5
2,274,815	-				-0.2
2,274,815	-				-0.0
2,274,817	+				-1.6
2,274,817	+				+0.7
2,274,818	-				+0.0
2,274,818	-				+0.2
2,274,818	-				-0.1
2,274,818	-				-1.1
2,274,818	-				+2.8
2,274,818	-				-0.3
2,274,826	+				+1.1
2,274,838	+				+0.8
2,274,838	+				-0.9
2,274,862	+				+1.2
2,274,863	-				+1.5
2,274,879	+				+0.6
2,274,880	-				+0.7
2,274,880	-				-2.1
2,274,880	-				+0.6
2,274,951	-		IAI47_10765	0.12	-1.3
2,274,954	-		IAI47_10765	0.12	+2.0
2,275,022	+		IAI47_10765	0.19	+3.5
2,275,022	+		IAI47_10765	0.19	-0.0
2,275,023	-		IAI47_10765	0.19	-0.3
2,275,023	-		IAI47_10765	0.19	-0.5
2,275,023	-		IAI47_10765	0.19	-0.3
2,275,023	-		IAI47_10765	0.19	+0.5
2,275,041	+		IAI47_10765	0.20	-0.3
2,275,041	+		IAI47_10765	0.20	+1.5
2,275,041	+		IAI47_10765	0.20	-1.0
2,275,041	+		IAI47_10765	0.20	+0.6
2,275,041	+		IAI47_10765	0.20	+1.2
2,275,041	+		IAI47_10765	0.20	+0.7
2,275,041	+		IAI47_10765	0.20	-0.7
2,275,042	-		IAI47_10765	0.20	+0.9
2,275,042	-		IAI47_10765	0.20	+0.0
2,275,042	-		IAI47_10765	0.20	+2.3
2,275,042	-		IAI47_10765	0.20	-1.7
2,275,042	-		IAI47_10765	0.20	-1.6
2,275,042	-		IAI47_10765	0.20	+0.7
2,275,042	-		IAI47_10765	0.20	-1.0
2,275,045	+		IAI47_10765	0.21	-0.3
2,275,045	+		IAI47_10765	0.21	+0.5
2,275,045	+		IAI47_10765	0.21	-0.0
2,275,045	+		IAI47_10765	0.21	-0.3
2,275,046	-		IAI47_10765	0.21	+1.2
2,275,046	-		IAI47_10765	0.21	+1.6
2,275,046	-		IAI47_10765	0.21	+1.1
2,275,046	-		IAI47_10765	0.21	+0.3
2,275,046	-		IAI47_10765	0.21	-0.6
2,275,046	-		IAI47_10765	0.21	-1.0
2,275,046	-		IAI47_10765	0.21	+0.6
2,275,046	-		IAI47_10765	0.21	+1.3
2,275,046	-		IAI47_10765	0.21	+0.3
2,275,078	+		IAI47_10765	0.24	-0.6
2,275,129	+		IAI47_10765	0.28	-1.5
2,275,138	+		IAI47_10765	0.29	+0.1
2,275,138	+		IAI47_10765	0.29	-0.2
2,275,138	+		IAI47_10765	0.29	-1.3
2,275,138	+		IAI47_10765	0.29	-2.2
2,275,138	+		IAI47_10765	0.29	+1.6
2,275,138	+		IAI47_10765	0.29	-1.0
2,275,139	-		IAI47_10765	0.29	+0.4
2,275,139	-		IAI47_10765	0.29	-1.1
2,275,139	-		IAI47_10765	0.29	-1.2
2,275,147	+		IAI47_10765	0.30	-1.0
2,275,147	+		IAI47_10765	0.30	+1.4
2,275,148	-		IAI47_10765	0.30	+1.4
2,275,168	+		IAI47_10765	0.32	+1.2
2,275,168	+		IAI47_10765	0.32	-0.3
2,275,169	-		IAI47_10765	0.32	+2.2
2,275,169	-		IAI47_10765	0.32	-1.5
2,275,210	+		IAI47_10765	0.36	-0.3
2,275,211	-		IAI47_10765	0.36	+1.4
2,275,252	+		IAI47_10765	0.40	+1.1
2,275,252	+		IAI47_10765	0.40	+0.1
2,275,253	-		IAI47_10765	0.40	-1.6
2,275,376	+		IAI47_10765	0.51	+1.6
2,275,376	+		IAI47_10765	0.51	-0.2
2,275,427	+		IAI47_10765	0.55	-1.8
2,275,428	-		IAI47_10765	0.56	-0.2
2,275,428	-		IAI47_10765	0.56	+0.6
2,275,470	+		IAI47_10765	0.59	+1.1
2,275,470	+		IAI47_10765	0.59	+1.6
2,275,470	+		IAI47_10765	0.59	+0.6
2,275,483	-		IAI47_10765	0.61	-0.5
2,275,489	+		IAI47_10765	0.61	+0.5
2,275,489	+		IAI47_10765	0.61	-0.1
2,275,490	-		IAI47_10765	0.61	-0.3
2,275,513	+		IAI47_10765	0.63	-0.2
2,275,513	+		IAI47_10765	0.63	-1.2
2,275,513	+		IAI47_10765	0.63	-1.4
2,275,514	-		IAI47_10765	0.63	+0.4
2,275,514	-		IAI47_10765	0.63	+0.8
2,275,522	-		IAI47_10765	0.64	+2.8
2,275,522	-		IAI47_10765	0.64	+0.0
2,275,528	+		IAI47_10765	0.65	+2.0
2,275,529	-		IAI47_10765	0.65	-1.1
2,275,586	+		IAI47_10765	0.70	+1.8
2,275,587	-		IAI47_10765	0.70	+0.0
2,275,587	-		IAI47_10765	0.70	-0.3
2,275,587	-		IAI47_10765	0.70	+0.8
2,275,587	-		IAI47_10765	0.70	+0.9
2,275,612	+		IAI47_10765	0.72	-2.3
2,275,613	-		IAI47_10765	0.72	-0.8
2,275,613	-		IAI47_10765	0.72	+0.7
2,275,619	+		IAI47_10765	0.73	+0.4
2,275,661	+		IAI47_10765	0.77	+1.4
2,275,661	+		IAI47_10765	0.77	-0.9
2,275,662	-		IAI47_10765	0.77	-0.8
2,275,662	-		IAI47_10765	0.77	-2.1
2,275,662	-		IAI47_10765	0.77	+0.7
2,275,727	+		IAI47_10765	0.83	+1.7
2,275,727	+		IAI47_10765	0.83	-1.9
2,275,727	+		IAI47_10765	0.83	-1.0
2,275,727	+		IAI47_10765	0.83	+0.7
2,275,727	+		IAI47_10765	0.83	+0.6
2,275,728	-		IAI47_10765	0.83	+1.1
2,275,728	-		IAI47_10765	0.83	+1.1
2,275,728	-		IAI47_10765	0.83	+0.0