Strain Fitness in Pantoea sp. MT58 around IAI47_10095

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,137,769	+		IAI47_10085	0.89	-0.0
2,137,770	-		IAI47_10085	0.90	+1.3
2,137,817	-				+0.3
2,137,823	+				-0.7
2,137,873	+				+0.8
2,137,873	+				-0.5
2,137,873	+				-1.1
2,137,874	-				-0.8
2,137,874	-				-0.6
2,137,874	-				+1.3
2,137,874	-				-0.8
2,137,902	+				+1.8
2,137,903	-				-0.7
2,137,903	-				+0.5
2,137,982	-		IAI47_10090	0.12	+1.0
2,137,982	-		IAI47_10090	0.12	-0.2
2,138,186	+		IAI47_10090	0.34	+1.5
2,138,186	+		IAI47_10090	0.34	-0.9
2,138,186	+		IAI47_10090	0.34	-1.1
2,138,186	+		IAI47_10090	0.34	+0.8
2,138,187	-		IAI47_10090	0.35	+0.9
2,138,187	-		IAI47_10090	0.35	-0.6
2,138,187	-		IAI47_10090	0.35	-0.6
2,138,187	-		IAI47_10090	0.35	+1.9
2,138,193	+		IAI47_10090	0.35	-0.8
2,138,193	+		IAI47_10090	0.35	-1.1
2,138,193	+		IAI47_10090	0.35	+0.2
2,138,193	+		IAI47_10090	0.35	+2.2
2,138,193	+		IAI47_10090	0.35	-1.7
2,138,193	-		IAI47_10090	0.35	+2.7
2,138,194	-		IAI47_10090	0.35	+0.5
2,138,194	-		IAI47_10090	0.35	-1.8
2,138,194	-		IAI47_10090	0.35	-2.0
2,138,194	-		IAI47_10090	0.35	+2.2
2,138,194	-		IAI47_10090	0.35	+0.0
2,138,194	-		IAI47_10090	0.35	-0.2
2,138,194	-		IAI47_10090	0.35	-0.1
2,138,194	-		IAI47_10090	0.35	-1.5
2,138,296	+		IAI47_10090	0.47	-0.0
2,138,297	-		IAI47_10090	0.47	+1.4
2,138,297	-		IAI47_10090	0.47	+1.1
2,138,302	+		IAI47_10090	0.47	-1.0
2,138,302	+		IAI47_10090	0.47	-1.2
2,138,302	+		IAI47_10090	0.47	-0.2
2,138,302	+		IAI47_10090	0.47	+0.8
2,138,303	-		IAI47_10090	0.47	-0.5
2,138,303	-		IAI47_10090	0.47	-0.2
2,138,303	-		IAI47_10090	0.47	-1.0
2,138,303	-		IAI47_10090	0.47	-0.2
2,138,383	+		IAI47_10090	0.56	-1.0
2,138,383	+		IAI47_10090	0.56	+0.7
2,138,384	-		IAI47_10090	0.56	-0.7
2,138,455	+		IAI47_10090	0.64	-0.3
2,138,473	-		IAI47_10090	0.66	-1.1
2,138,473	-		IAI47_10090	0.66	+0.9
2,138,509	+		IAI47_10090	0.70	-0.8
2,138,509	+		IAI47_10090	0.70	-0.1
2,138,509	+		IAI47_10090	0.70	-1.9
2,138,510	-		IAI47_10090	0.70	+1.7
2,138,510	-		IAI47_10090	0.70	+0.9
2,138,510	-		IAI47_10090	0.70	+0.3
2,138,512	+		IAI47_10090	0.70	+0.1
2,138,512	+		IAI47_10090	0.70	-0.9
2,138,513	-		IAI47_10090	0.71	-0.3
2,138,513	-		IAI47_10090	0.71	+0.1
2,138,513	-		IAI47_10090	0.71	+2.3
2,138,539	+		IAI47_10090	0.73	+0.6
2,138,557	+		IAI47_10090	0.75	+1.5
2,138,557	+		IAI47_10090	0.75	+1.2
2,138,569	+		IAI47_10090	0.77	+0.4
2,138,570	-		IAI47_10090	0.77	+2.4
2,138,660	+		IAI47_10090	0.87	-0.3
2,138,660	+		IAI47_10090	0.87	+2.2
2,138,660	+		IAI47_10090	0.87	-2.2
2,138,661	-		IAI47_10090	0.87	+1.0
2,138,661	-		IAI47_10090	0.87	-1.1
2,138,661	-		IAI47_10090	0.87	-1.7
2,138,661	-		IAI47_10090	0.87	+1.7
2,138,661	-		IAI47_10090	0.87	-0.6
2,138,661	-		IAI47_10090	0.87	-0.6
2,138,661	-		IAI47_10090	0.87	-0.0
2,138,661	-		IAI47_10090	0.87	+0.3
2,138,713	+				-0.2
2,138,713	+				+0.9
2,138,714	-				-0.8
2,138,714	-				-1.7
2,138,729	-				-0.5
2,138,737	-				+0.1
2,138,748	+				+0.4
2,138,748	+				+2.2
2,138,748	+				+1.8
2,138,748	+				-1.0
2,138,748	+				-0.8
2,138,749	-				+0.2
2,138,749	-				+1.5
2,138,749	-				-1.3
2,138,823	-				-2.2
2,138,826	-				+3.4
2,138,893	+		IAI47_10095	0.16	+0.2
2,138,915	+		IAI47_10095	0.19	-1.7
2,139,062	+		IAI47_10095	0.36	-1.5
2,139,063	-		IAI47_10095	0.36	-0.4
2,139,131	+		IAI47_10095	0.44	-2.4
2,139,132	-		IAI47_10095	0.44	+1.2
2,139,219	+		IAI47_10095	0.54	-0.7
2,139,220	-		IAI47_10095	0.54	-1.1
2,139,220	-		IAI47_10095	0.54	-1.0
2,139,228	+		IAI47_10095	0.55	-0.6
2,139,228	+		IAI47_10095	0.55	+0.8
2,139,229	-		IAI47_10095	0.55	-1.2
2,139,229	-		IAI47_10095	0.55	-1.8
2,139,229	-		IAI47_10095	0.55	-0.9
2,139,407	+		IAI47_10095	0.76	-0.6
2,139,408	-		IAI47_10095	0.76	+0.9
2,139,462	+		IAI47_10095	0.82	-0.1
2,139,462	+		IAI47_10095	0.82	+1.0
2,139,462	+		IAI47_10095	0.82	+0.2
2,139,462	+		IAI47_10095	0.82	+0.1
2,139,462	+		IAI47_10095	0.82	-0.2
2,139,462	+		IAI47_10095	0.82	+1.6
2,139,463	-		IAI47_10095	0.82	-0.4
2,139,463	-		IAI47_10095	0.82	+1.5
2,139,463	-		IAI47_10095	0.82	+0.6
2,139,463	-		IAI47_10095	0.82	-0.4
2,139,463	-		IAI47_10095	0.82	+2.6
2,139,522	+		IAI47_10095	0.89	+2.2
2,139,522	+		IAI47_10095	0.89	+3.0
2,139,522	+		IAI47_10095	0.89	+0.8
2,139,522	+		IAI47_10095	0.89	-0.8
2,139,523	-		IAI47_10095	0.89	-1.1
2,139,586	+				+1.2
2,139,615	+				+0.2
2,139,615	+				-0.3
2,139,616	-				-1.3
2,139,632	+				+1.3
2,139,632	+				+1.0
2,139,633	-				-0.2
2,139,698	-				-0.2
2,139,698	-				-1.1
2,139,711	-		IAI47_10100	0.11	-0.2
2,139,995	+		IAI47_10100	0.48	+1.8
2,139,995	+		IAI47_10100	0.48	+2.4
2,140,043	-		IAI47_10100	0.54	-1.8
2,140,200	+		IAI47_10100	0.75	+1.9
2,140,200	+		IAI47_10100	0.75	+1.1
2,140,201	-		IAI47_10100	0.75	-1.5
2,140,201	-		IAI47_10100	0.75	+3.3
2,140,201	-		IAI47_10100	0.75	-0.2
2,140,201	-		IAI47_10100	0.75	-0.6
2,140,252	+		IAI47_10100	0.82	+1.4
2,140,331	+				+0.8
2,140,331	+				+1.1
2,140,331	+				-0.3
2,140,331	+				+1.6
2,140,332	-				+0.8
2,140,393	+				+0.5
2,140,584	-		IAI47_10105	0.20	-0.7
2,140,591	+		IAI47_10105	0.21	-0.7
2,140,591	+		IAI47_10105	0.21	-0.4
2,140,591	+		IAI47_10105	0.21	-1.1
2,140,591	+		IAI47_10105	0.21	-1.1
2,140,591	+		IAI47_10105	0.21	+0.5
2,140,591	+		IAI47_10105	0.21	-0.4
2,140,592	-		IAI47_10105	0.21	-0.6
2,140,592	-		IAI47_10105	0.21	-1.5