Strain Fitness in Pantoea sp. MT58 around IAI47_09935

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,102,509	-				-2.2
2,102,549	+				-1.1
2,102,549	+				+1.0
2,102,550	-				+0.8
2,102,550	-				+2.3
2,102,550	-				+3.6
2,102,570	-				+0.2
2,102,570	-				-0.6
2,102,591	+		IAI47_09925	0.13	-0.5
2,102,591	+		IAI47_09925	0.13	+1.3
2,102,591	+		IAI47_09925	0.13	+0.2
2,102,592	-		IAI47_09925	0.13	-1.3
2,102,592	-		IAI47_09925	0.13	-1.2
2,102,592	-		IAI47_09925	0.13	-1.3
2,102,594	+		IAI47_09925	0.14	+0.2
2,102,615	-		IAI47_09925	0.20	+0.1
2,102,636	+		IAI47_09925	0.26	+0.2
2,102,691	+		IAI47_09925	0.43	+0.2
2,102,692	-		IAI47_09925	0.43	-0.3
2,102,692	-		IAI47_09925	0.43	+0.0
2,102,699	+		IAI47_09925	0.45	-0.6
2,102,699	+		IAI47_09925	0.45	-1.7
2,102,699	+		IAI47_09925	0.45	-0.6
2,102,700	-		IAI47_09925	0.45	-0.8
2,102,700	-		IAI47_09925	0.45	-1.3
2,102,700	-		IAI47_09925	0.45	-1.2
2,102,707	+		IAI47_09925	0.47	-2.1
2,102,708	-		IAI47_09925	0.48	-1.3
2,102,774	+		IAI47_09925	0.67	+0.1
2,102,774	+		IAI47_09925	0.67	-1.5
2,102,774	+		IAI47_09925	0.67	-0.2
2,102,774	+		IAI47_09925	0.67	-1.0
2,102,774	+		IAI47_09925	0.67	-1.3
2,102,774	+		IAI47_09925	0.67	-0.3
2,102,774	+		IAI47_09925	0.67	-0.1
2,102,775	-		IAI47_09925	0.68	+0.7
2,102,775	-		IAI47_09925	0.68	-2.7
2,102,775	-		IAI47_09925	0.68	+1.2
2,102,830	-		IAI47_09925	0.84	+0.4
2,102,830	-		IAI47_09925	0.84	+0.8
2,102,830	-		IAI47_09925	0.84	+0.0
2,102,864	+				-0.2
2,102,872	+				+0.4
2,102,872	+				-1.1
2,102,873	-				+0.2
2,102,873	-				-1.0
2,102,873	-				+0.1
2,102,873	-				-0.8
2,102,915	-				+0.0
2,102,978	-				-1.0
2,102,978	-				-1.3
2,103,012	-				-1.1
2,103,044	+				-1.3
2,103,044	+				+0.1
2,103,045	-				+1.8
2,103,045	-				+0.4
2,103,045	-				-1.1
2,103,109	+				+1.2
2,103,110	-				+0.4
2,103,112	-				-0.3
2,103,129	+				-0.9
2,103,129	+				+1.2
2,103,129	+				-0.5
2,103,154	+				-1.3
2,103,491	+				-1.3
2,103,491	+				-0.9
2,103,492	-				-0.2
2,103,521	-				+1.7
2,103,533	+				-2.2
2,103,583	-				+1.7
2,103,676	+		IAI47_09935	0.14	+2.8
2,103,677	-		IAI47_09935	0.14	-0.2
2,103,677	-		IAI47_09935	0.14	+0.5
2,103,677	-		IAI47_09935	0.14	+1.2
2,103,677	-		IAI47_09935	0.14	+1.2
2,103,685	-		IAI47_09935	0.15	+1.5
2,103,685	-		IAI47_09935	0.15	+1.2
2,103,697	+		IAI47_09935	0.15	+2.3
2,103,698	-		IAI47_09935	0.16	-0.6
2,103,700	+		IAI47_09935	0.16	+0.8
2,103,701	-		IAI47_09935	0.16	+0.4
2,103,707	+		IAI47_09935	0.16	+1.2
2,103,799	+		IAI47_09935	0.23	-0.8
2,103,808	+		IAI47_09935	0.24	-1.3
2,103,814	+		IAI47_09935	0.24	-0.4
2,103,815	-		IAI47_09935	0.24	-1.1
2,103,844	+		IAI47_09935	0.27	+1.2
2,103,845	-		IAI47_09935	0.27	+1.0
2,103,845	-		IAI47_09935	0.27	-1.5
2,103,847	-		IAI47_09935	0.27	-0.9
2,103,847	-		IAI47_09935	0.27	-1.0
2,103,903	-		IAI47_09935	0.31	-0.2
2,103,938	+		IAI47_09935	0.34	-2.5
2,103,938	+		IAI47_09935	0.34	+1.2
2,103,938	+		IAI47_09935	0.34	-1.3
2,103,938	+		IAI47_09935	0.34	+0.2
2,103,939	-		IAI47_09935	0.34	+1.8
2,103,949	+		IAI47_09935	0.34	+1.2
2,103,949	+		IAI47_09935	0.34	+0.8
2,103,949	+		IAI47_09935	0.34	-0.9
2,103,949	+		IAI47_09935	0.34	+0.6
2,103,950	-		IAI47_09935	0.35	-0.6
2,103,950	-		IAI47_09935	0.35	-0.9
2,103,950	-		IAI47_09935	0.35	+2.8
2,103,988	+		IAI47_09935	0.37	+1.0
2,103,988	+		IAI47_09935	0.37	+1.4
2,103,988	+		IAI47_09935	0.37	+0.3
2,103,988	+		IAI47_09935	0.37	+1.8
2,103,989	-		IAI47_09935	0.37	-0.4
2,103,989	-		IAI47_09935	0.37	+1.2
2,103,991	+		IAI47_09935	0.38	+0.3
2,103,991	+		IAI47_09935	0.38	+2.2
2,103,991	+		IAI47_09935	0.38	-1.5
2,103,991	+		IAI47_09935	0.38	-0.1
2,103,992	-		IAI47_09935	0.38	+2.7
2,103,992	-		IAI47_09935	0.38	-1.7
2,104,029	-		IAI47_09935	0.40	-0.6
2,104,029	-		IAI47_09935	0.40	-0.5
2,104,043	+		IAI47_09935	0.42	+0.2
2,104,076	+		IAI47_09935	0.44	+2.7
2,104,077	-		IAI47_09935	0.44	+1.2
2,104,077	-		IAI47_09935	0.44	+0.0
2,104,088	+		IAI47_09935	0.45	+0.2
2,104,088	+		IAI47_09935	0.45	+2.8
2,104,088	+		IAI47_09935	0.45	-1.8
2,104,088	+		IAI47_09935	0.45	-0.2
2,104,088	+		IAI47_09935	0.45	+0.6
2,104,089	-		IAI47_09935	0.45	+0.1
2,104,089	-		IAI47_09935	0.45	+1.5
2,104,089	-		IAI47_09935	0.45	-0.6
2,104,094	+		IAI47_09935	0.45	-1.6
2,104,094	+		IAI47_09935	0.45	-0.5
2,104,094	+		IAI47_09935	0.45	-0.9
2,104,094	+		IAI47_09935	0.45	+0.4
2,104,095	-		IAI47_09935	0.45	+1.4
2,104,129	+		IAI47_09935	0.48	-0.6
2,104,129	+		IAI47_09935	0.48	+0.6
2,104,130	-		IAI47_09935	0.48	+0.7
2,104,252	+		IAI47_09935	0.57	+1.0
2,104,252	+		IAI47_09935	0.57	-1.0
2,104,252	+		IAI47_09935	0.57	-0.5
2,104,252	+		IAI47_09935	0.57	-0.5
2,104,253	-		IAI47_09935	0.57	+0.6
2,104,265	+		IAI47_09935	0.58	+4.4
2,104,265	+		IAI47_09935	0.58	+1.2
2,104,265	+		IAI47_09935	0.58	-0.9
2,104,265	+		IAI47_09935	0.58	-1.3
2,104,265	+		IAI47_09935	0.58	+2.2
2,104,265	+		IAI47_09935	0.58	-0.2
2,104,266	-		IAI47_09935	0.58	-0.7
2,104,266	-		IAI47_09935	0.58	+0.0
2,104,266	-		IAI47_09935	0.58	-0.5
2,104,266	-		IAI47_09935	0.58	-1.6
2,104,266	-		IAI47_09935	0.58	+0.0
2,104,302	+		IAI47_09935	0.61	+0.8
2,104,302	+		IAI47_09935	0.61	-0.2
2,104,302	+		IAI47_09935	0.61	+3.2
2,104,303	-		IAI47_09935	0.61	+0.3
2,104,303	-		IAI47_09935	0.61	-0.3
2,104,303	-		IAI47_09935	0.61	-2.2
2,104,325	+		IAI47_09935	0.63	-0.8
2,104,325	+		IAI47_09935	0.63	+0.8
2,104,326	-		IAI47_09935	0.63	-0.6
2,104,326	-		IAI47_09935	0.63	+1.2
2,104,326	-		IAI47_09935	0.63	+1.0
2,104,326	-		IAI47_09935	0.63	+2.0
2,104,338	-		IAI47_09935	0.64	+0.8
2,104,392	-		IAI47_09935	0.68	-0.2
2,104,392	-		IAI47_09935	0.68	-0.6
2,104,402	+		IAI47_09935	0.69	-0.5
2,104,403	-		IAI47_09935	0.69	+0.0
2,104,439	+		IAI47_09935	0.71	-1.9
2,104,440	-		IAI47_09935	0.71	+0.5
2,104,476	+		IAI47_09935	0.74	-0.7
2,104,477	-		IAI47_09935	0.74	-1.1
2,104,477	-		IAI47_09935	0.74	+2.8
2,104,477	-		IAI47_09935	0.74	-0.5
2,104,477	-		IAI47_09935	0.74	-2.1
2,104,494	+		IAI47_09935	0.76	-1.5
2,104,494	+		IAI47_09935	0.76	+0.7
2,104,494	+		IAI47_09935	0.76	-1.0
2,104,494	+		IAI47_09935	0.76	+0.5
2,104,495	-		IAI47_09935	0.76	-0.6
2,104,495	-		IAI47_09935	0.76	-0.5
2,104,505	-		IAI47_09935	0.76	-1.5
2,104,535	+		IAI47_09935	0.79	-0.5
2,104,535	+		IAI47_09935	0.79	+2.1
2,104,536	-		IAI47_09935	0.79	+1.8
2,104,543	+		IAI47_09935	0.79	-2.3
2,104,543	+		IAI47_09935	0.79	-1.3
2,104,543	+		IAI47_09935	0.79	+0.1
2,104,543	+		IAI47_09935	0.79	-0.3
2,104,543	+		IAI47_09935	0.79	-1.3
2,104,593	+		IAI47_09935	0.83	-0.3
2,104,594	-		IAI47_09935	0.83	-0.6
2,104,594	-		IAI47_09935	0.83	-0.8
2,104,596	+		IAI47_09935	0.83	-0.3
2,104,596	+		IAI47_09935	0.83	+1.2
2,104,597	-		IAI47_09935	0.83	-1.8
2,104,605	+		IAI47_09935	0.84	-0.8
2,104,613	-		IAI47_09935	0.85	+1.1
2,104,995	+				-2.8
2,104,995	+				+1.8
2,104,996	-				+1.9
2,105,062	+				-1.0
2,105,062	+				-0.5
2,105,062	+				-0.7
2,105,063	-				+2.8
2,105,063	-				-1.3
2,105,063	-				-0.2
2,105,063	-				-1.6
2,105,073	+				-2.2
2,105,074	-				-1.2
2,105,110	+				+0.2
2,105,110	+				-0.5
2,105,110	+				-0.6
2,105,111	-				+2.2
2,105,111	-				-0.3
2,105,111	-				-0.8
2,105,111	-				-0.4
2,105,139	+				-0.3
2,105,139	+				+0.1
2,105,139	+				-0.1
2,105,139	+				-0.6
2,105,140	-				-1.3
2,105,140	-				-0.7
2,105,140	-				+1.7
2,105,140	-				+2.3
2,105,140	-				-0.4
2,105,140	-				-0.5
2,105,208	+				+0.7
2,105,209	-				+2.7
2,105,316	+		IAI47_09940	0.11	-1.4
2,105,317	-		IAI47_09940	0.11	+0.4
2,105,317	-		IAI47_09940	0.11	-1.5
2,105,323	+		IAI47_09940	0.11	+1.7
2,105,323	+		IAI47_09940	0.11	+0.6
2,105,385	-		IAI47_09940	0.17	+2.3
2,105,387	+		IAI47_09940	0.18	+4.9
2,105,387	+		IAI47_09940	0.18	+1.8
2,105,387	+		IAI47_09940	0.18	+0.1
2,105,387	+		IAI47_09940	0.18	+1.0
2,105,387	+		IAI47_09940	0.18	+1.7
2,105,388	-		IAI47_09940	0.18	+1.1
2,105,388	-		IAI47_09940	0.18	+0.5
2,105,473	+		IAI47_09940	0.26	+0.2
2,105,473	+		IAI47_09940	0.26	-0.6
2,105,474	-		IAI47_09940	0.26	+0.9
2,105,474	-		IAI47_09940	0.26	-1.5
2,105,474	-		IAI47_09940	0.26	-0.9
2,105,477	-		IAI47_09940	0.26	+1.0
2,105,499	+		IAI47_09940	0.29	-0.3
2,105,499	+		IAI47_09940	0.29	+0.6
2,105,500	-		IAI47_09940	0.29	+1.2
2,105,500	-		IAI47_09940	0.29	-0.8
2,105,500	-		IAI47_09940	0.29	-0.1
2,105,500	-		IAI47_09940	0.29	-0.6
2,105,500	-		IAI47_09940	0.29	-1.3
2,105,504	-		IAI47_09940	0.29	-0.3
2,105,562	+		IAI47_09940	0.35	-0.9
2,105,562	+		IAI47_09940	0.35	+1.6
2,105,562	+		IAI47_09940	0.35	-1.8
2,105,562	+		IAI47_09940	0.35	-1.4
2,105,600	+		IAI47_09940	0.39	-0.8
2,105,600	+		IAI47_09940	0.39	-1.0
2,105,601	-		IAI47_09940	0.39	+1.0
2,105,601	-		IAI47_09940	0.39	+0.5
2,105,601	-		IAI47_09940	0.39	-0.5
2,105,613	+		IAI47_09940	0.40	+0.4
2,105,613	+		IAI47_09940	0.40	+0.7
2,105,632	+		IAI47_09940	0.42	+1.9
2,105,686	+		IAI47_09940	0.47	+0.8
2,105,686	+		IAI47_09940	0.47	+0.6
2,105,686	+		IAI47_09940	0.47	+2.2
2,105,750	-		IAI47_09940	0.53	+1.6
2,105,750	-		IAI47_09940	0.53	-0.4
2,105,760	+		IAI47_09940	0.54	+0.5
2,105,760	+		IAI47_09940	0.54	+0.8
2,105,760	+		IAI47_09940	0.54	-0.6
2,105,761	-		IAI47_09940	0.54	-0.9
2,105,761	-		IAI47_09940	0.54	-0.2
2,105,808	+		IAI47_09940	0.59	+0.4
2,105,808	+		IAI47_09940	0.59	+0.7
2,105,808	+		IAI47_09940	0.59	-2.0
2,105,808	+		IAI47_09940	0.59	-0.5
2,105,808	+		IAI47_09940	0.59	-0.6
2,105,809	-		IAI47_09940	0.59	-1.8
2,105,809	-		IAI47_09940	0.59	-0.1
2,105,809	-		IAI47_09940	0.59	+2.1
2,105,809	-		IAI47_09940	0.59	+2.2
2,105,809	-		IAI47_09940	0.59	-1.1
2,105,812	+		IAI47_09940	0.59	-1.6
2,105,812	+		IAI47_09940	0.59	-0.3