Strain Fitness in Pantoea sp. MT58 around IAI47_09925

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,101,548	+		IAI47_09920	0.68	+1.2
2,101,563	+		IAI47_09920	0.68	+0.1
2,101,563	+		IAI47_09920	0.68	-0.2
2,101,564	-		IAI47_09920	0.68	+0.0
2,101,585	-		IAI47_09920	0.70	+0.0
2,101,621	+		IAI47_09920	0.71	+2.0
2,101,621	+		IAI47_09920	0.71	+0.2
2,101,621	+		IAI47_09920	0.71	+1.7
2,101,621	+		IAI47_09920	0.71	-0.2
2,101,621	+		IAI47_09920	0.71	-0.2
2,101,621	+		IAI47_09920	0.71	+1.1
2,101,621	+		IAI47_09920	0.71	-2.3
2,101,621	+		IAI47_09920	0.71	+0.0
2,101,621	+		IAI47_09920	0.71	-0.8
2,101,621	+		IAI47_09920	0.71	+0.0
2,101,621	+		IAI47_09920	0.71	-0.5
2,101,621	+		IAI47_09920	0.71	+1.8
2,101,621	+		IAI47_09920	0.71	+0.9
2,101,622	-		IAI47_09920	0.71	+3.1
2,101,622	-		IAI47_09920	0.71	-1.8
2,101,622	-		IAI47_09920	0.71	+1.0
2,101,622	-		IAI47_09920	0.71	-1.0
2,101,622	-		IAI47_09920	0.71	-0.2
2,101,622	-		IAI47_09920	0.71	+0.0
2,101,677	+		IAI47_09920	0.74	+0.0
2,101,677	+		IAI47_09920	0.74	+0.5
2,101,776	+		IAI47_09920	0.79	-1.9
2,101,776	+		IAI47_09920	0.79	-0.3
2,101,795	-		IAI47_09920	0.80	-1.1
2,101,795	-		IAI47_09920	0.80	-2.4
2,101,795	-		IAI47_09920	0.80	+1.8
2,101,795	-		IAI47_09920	0.80	-0.6
2,101,827	+		IAI47_09920	0.81	-0.3
2,101,827	+		IAI47_09920	0.81	+1.6
2,101,827	+		IAI47_09920	0.81	+1.4
2,101,828	-		IAI47_09920	0.81	-0.6
2,101,828	-		IAI47_09920	0.81	-0.4
2,101,857	+		IAI47_09920	0.83	-0.3
2,101,857	+		IAI47_09920	0.83	+0.2
2,101,857	+		IAI47_09920	0.83	-0.6
2,101,858	-		IAI47_09920	0.83	-0.9
2,101,870	-		IAI47_09920	0.83	+2.8
2,101,909	+		IAI47_09920	0.85	-1.4
2,101,938	+		IAI47_09920	0.87	-0.3
2,101,938	+		IAI47_09920	0.87	-1.1
2,101,938	+		IAI47_09920	0.87	-2.0
2,101,939	-		IAI47_09920	0.87	+0.2
2,101,939	-		IAI47_09920	0.87	+0.4
2,101,939	-		IAI47_09920	0.87	+2.1
2,101,945	+		IAI47_09920	0.87	+0.2
2,101,945	+		IAI47_09920	0.87	+1.1
2,101,945	+		IAI47_09920	0.87	+1.5
2,101,946	-		IAI47_09920	0.87	-0.5
2,101,964	-		IAI47_09920	0.88	-0.3
2,101,995	+		IAI47_09920	0.90	-0.3
2,102,026	+				-1.8
2,102,027	-				+3.4
2,102,057	+				-1.2
2,102,057	+				+0.0
2,102,058	-				-1.6
2,102,096	+				-1.9
2,102,096	+				-0.1
2,102,096	+				-0.5
2,102,096	+				-1.9
2,102,097	-				-0.5
2,102,150	+				-0.7
2,102,150	+				-0.2
2,102,150	+				+1.2
2,102,151	-				-1.4
2,102,166	+				+2.6
2,102,166	+				+0.2
2,102,206	+				-1.1
2,102,207	-				+1.2
2,102,249	+				+1.1
2,102,249	+				+1.8
2,102,252	+				-0.9
2,102,253	-				+0.5
2,102,272	+				-0.3
2,102,285	-				+1.5
2,102,291	+				-0.5
2,102,292	-				+0.5
2,102,335	+				+0.1
2,102,335	+				-1.3
2,102,335	+				+0.4
2,102,376	+				-0.5
2,102,376	+				+0.6
2,102,377	-				-0.6
2,102,377	-				+0.0
2,102,377	-				+2.4
2,102,398	+				-1.3
2,102,400	+				-0.4
2,102,426	+				+0.4
2,102,509	-				-2.2
2,102,549	+				-1.1
2,102,549	+				+1.0
2,102,550	-				+0.8
2,102,550	-				+2.3
2,102,550	-				+3.6
2,102,570	-				+0.2
2,102,570	-				-0.6
2,102,591	+		IAI47_09925	0.13	-0.5
2,102,591	+		IAI47_09925	0.13	+1.3
2,102,591	+		IAI47_09925	0.13	+0.2
2,102,592	-		IAI47_09925	0.13	-1.3
2,102,592	-		IAI47_09925	0.13	-1.2
2,102,592	-		IAI47_09925	0.13	-1.3
2,102,594	+		IAI47_09925	0.14	+0.2
2,102,615	-		IAI47_09925	0.20	+0.1
2,102,636	+		IAI47_09925	0.26	+0.2
2,102,691	+		IAI47_09925	0.43	+0.2
2,102,692	-		IAI47_09925	0.43	-0.3
2,102,692	-		IAI47_09925	0.43	+0.0
2,102,699	+		IAI47_09925	0.45	-0.6
2,102,699	+		IAI47_09925	0.45	-1.7
2,102,699	+		IAI47_09925	0.45	-0.6
2,102,700	-		IAI47_09925	0.45	-0.8
2,102,700	-		IAI47_09925	0.45	-1.3
2,102,700	-		IAI47_09925	0.45	-1.2
2,102,707	+		IAI47_09925	0.47	-2.1
2,102,708	-		IAI47_09925	0.48	-1.3
2,102,774	+		IAI47_09925	0.67	+0.1
2,102,774	+		IAI47_09925	0.67	-1.5
2,102,774	+		IAI47_09925	0.67	-0.2
2,102,774	+		IAI47_09925	0.67	-1.0
2,102,774	+		IAI47_09925	0.67	-1.3
2,102,774	+		IAI47_09925	0.67	-0.3
2,102,774	+		IAI47_09925	0.67	-0.1
2,102,775	-		IAI47_09925	0.68	+0.7
2,102,775	-		IAI47_09925	0.68	-2.7
2,102,775	-		IAI47_09925	0.68	+1.2
2,102,830	-		IAI47_09925	0.84	+0.4
2,102,830	-		IAI47_09925	0.84	+0.8
2,102,830	-		IAI47_09925	0.84	+0.0
2,102,864	+				-0.2
2,102,872	+				+0.4
2,102,872	+				-1.1
2,102,873	-				+0.2
2,102,873	-				-1.0
2,102,873	-				+0.1
2,102,873	-				-0.8
2,102,915	-				+0.0
2,102,978	-				-1.0
2,102,978	-				-1.3
2,103,012	-				-1.1
2,103,044	+				-1.3
2,103,044	+				+0.1
2,103,045	-				+1.8
2,103,045	-				+0.4
2,103,045	-				-1.1
2,103,109	+				+1.2
2,103,110	-				+0.4
2,103,112	-				-0.3
2,103,129	+				-0.9
2,103,129	+				+1.2
2,103,129	+				-0.5
2,103,154	+				-1.3
2,103,491	+				-1.3
2,103,491	+				-0.9
2,103,492	-				-0.2
2,103,521	-				+1.7
2,103,533	+				-2.2
2,103,583	-				+1.7
2,103,676	+		IAI47_09935	0.14	+2.8
2,103,677	-		IAI47_09935	0.14	-0.2
2,103,677	-		IAI47_09935	0.14	+0.5
2,103,677	-		IAI47_09935	0.14	+1.2
2,103,677	-		IAI47_09935	0.14	+1.2
2,103,685	-		IAI47_09935	0.15	+1.5
2,103,685	-		IAI47_09935	0.15	+1.2
2,103,697	+		IAI47_09935	0.15	+2.3
2,103,698	-		IAI47_09935	0.16	-0.6
2,103,700	+		IAI47_09935	0.16	+0.8
2,103,701	-		IAI47_09935	0.16	+0.4
2,103,707	+		IAI47_09935	0.16	+1.2
2,103,799	+		IAI47_09935	0.23	-0.8
2,103,808	+		IAI47_09935	0.24	-1.3
2,103,814	+		IAI47_09935	0.24	-0.4
2,103,815	-		IAI47_09935	0.24	-1.1
2,103,844	+		IAI47_09935	0.27	+1.2
2,103,845	-		IAI47_09935	0.27	+1.0
2,103,845	-		IAI47_09935	0.27	-1.5
2,103,847	-		IAI47_09935	0.27	-0.9
2,103,847	-		IAI47_09935	0.27	-1.0