Strain Fitness in Pantoea sp. MT58 around IAI47_09920

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,099,212	-		IAI47_09915	0.39	+3.8
2,099,212	-		IAI47_09915	0.39	+0.2
2,099,241	-		IAI47_09915	0.42	-1.2
2,099,241	-		IAI47_09915	0.42	-0.0
2,099,267	-		IAI47_09915	0.43	-1.2
2,099,321	+		IAI47_09915	0.47	-0.8
2,099,321	+		IAI47_09915	0.47	+0.0
2,099,321	+		IAI47_09915	0.47	+1.3
2,099,322	-		IAI47_09915	0.47	+2.2
2,099,322	-		IAI47_09915	0.47	-0.6
2,099,322	-		IAI47_09915	0.47	-1.5
2,099,348	+		IAI47_09915	0.49	-0.8
2,099,379	+		IAI47_09915	0.52	+0.8
2,099,379	+		IAI47_09915	0.52	-1.5
2,099,379	+		IAI47_09915	0.52	+2.6
2,099,380	-		IAI47_09915	0.52	-1.7
2,099,380	-		IAI47_09915	0.52	-0.6
2,099,382	+		IAI47_09915	0.52	-1.3
2,099,382	+		IAI47_09915	0.52	+0.1
2,099,382	+		IAI47_09915	0.52	-0.2
2,099,382	+		IAI47_09915	0.52	+1.2
2,099,383	-		IAI47_09915	0.52	-0.9
2,099,383	-		IAI47_09915	0.52	-1.8
2,099,434	+		IAI47_09915	0.56	+1.5
2,099,434	+		IAI47_09915	0.56	+1.0
2,099,478	+		IAI47_09915	0.59	+1.0
2,099,478	+		IAI47_09915	0.59	+0.0
2,099,479	-		IAI47_09915	0.59	-1.6
2,099,479	-		IAI47_09915	0.59	+0.8
2,099,481	+		IAI47_09915	0.59	-1.1
2,099,482	-		IAI47_09915	0.59	-0.1
2,099,489	-		IAI47_09915	0.60	+1.4
2,099,489	-		IAI47_09915	0.60	-0.3
2,099,490	+		IAI47_09915	0.60	-1.1
2,099,491	-		IAI47_09915	0.60	-1.0
2,099,519	-		IAI47_09915	0.62	+1.2
2,099,519	-		IAI47_09915	0.62	-1.4
2,099,519	-		IAI47_09915	0.62	+1.5
2,099,587	+		IAI47_09915	0.67	+0.8
2,099,587	+		IAI47_09915	0.67	+0.7
2,099,587	+		IAI47_09915	0.67	+1.9
2,099,588	+		IAI47_09915	0.67	+0.1
2,099,588	-		IAI47_09915	0.67	+0.5
2,099,590	+		IAI47_09915	0.67	-1.0
2,099,590	+		IAI47_09915	0.67	-0.9
2,099,591	-		IAI47_09915	0.67	-2.2
2,099,591	-		IAI47_09915	0.67	-2.0
2,099,591	-		IAI47_09915	0.67	+1.2
2,099,591	-		IAI47_09915	0.67	-0.6
2,099,631	+		IAI47_09915	0.70	-0.5
2,099,650	+		IAI47_09915	0.71	+0.5
2,099,650	+		IAI47_09915	0.71	+1.5
2,099,651	-		IAI47_09915	0.71	-1.3
2,099,651	-		IAI47_09915	0.71	-0.6
2,099,686	+		IAI47_09915	0.74	+0.6
2,099,686	+		IAI47_09915	0.74	-1.0
2,099,686	+		IAI47_09915	0.74	-1.7
2,099,687	-		IAI47_09915	0.74	-2.2
2,099,687	-		IAI47_09915	0.74	-1.4
2,099,687	-		IAI47_09915	0.74	-0.1
2,099,687	-		IAI47_09915	0.74	+0.7
2,099,735	+		IAI47_09915	0.77	+1.2
2,099,735	+		IAI47_09915	0.77	+0.0
2,099,735	+		IAI47_09915	0.77	-0.3
2,099,771	+		IAI47_09915	0.80	+1.0
2,099,772	-		IAI47_09915	0.80	-0.5
2,099,782	-		IAI47_09915	0.81	-1.1
2,099,800	-		IAI47_09915	0.82	+0.7
2,099,836	-		IAI47_09915	0.85	+1.2
2,099,836	-		IAI47_09915	0.85	-1.0
2,099,844	+		IAI47_09915	0.85	-1.2
2,099,913	+				+1.5
2,099,913	+				+3.6
2,099,932	+				+1.1
2,099,932	+				-0.7
2,099,933	-				-0.8
2,099,933	-				+0.0
2,099,933	-				+0.0
2,099,988	+				+0.5
2,099,988	+				+0.5
2,099,989	-				+0.1
2,099,989	-				+0.5
2,099,989	-				-0.9
2,099,990	-				-1.9
2,099,998	+				-0.8
2,099,998	+				-1.6
2,099,998	+				+1.9
2,099,998	+				+0.3
2,099,999	-				+0.4
2,099,999	-				-0.5
2,099,999	-				+0.8
2,100,002	+				-0.8
2,100,002	+				+2.2
2,100,003	-				+1.1
2,100,003	-				-1.4
2,100,046	+				-1.0
2,100,078	+				+0.5
2,100,086	-				-0.7
2,100,102	+				+1.1
2,100,128	-				+0.2
2,100,223	-				+0.7
2,100,249	+				-1.8
2,100,304	+				-1.8
2,100,304	+				+1.1
2,100,382	+		IAI47_09920	0.11	+0.3
2,100,382	+		IAI47_09920	0.11	-1.4
2,100,383	-		IAI47_09920	0.11	+0.1
2,100,408	-		IAI47_09920	0.12	-1.0
2,100,451	+		IAI47_09920	0.14	-0.1
2,100,484	+		IAI47_09920	0.16	-0.8
2,100,484	+		IAI47_09920	0.16	-1.8
2,100,485	-		IAI47_09920	0.16	-0.8
2,100,485	-		IAI47_09920	0.16	-1.3
2,100,493	-		IAI47_09920	0.16	-0.2
2,100,541	-		IAI47_09920	0.18	-2.2
2,100,558	+		IAI47_09920	0.19	-0.4
2,100,559	-		IAI47_09920	0.19	+0.1
2,100,559	-		IAI47_09920	0.19	-0.6
2,100,559	-		IAI47_09920	0.19	-1.6
2,100,559	-		IAI47_09920	0.19	+0.8
2,100,559	-		IAI47_09920	0.19	+0.2
2,100,559	-		IAI47_09920	0.19	-1.0
2,100,559	-		IAI47_09920	0.19	+0.4
2,100,561	+		IAI47_09920	0.19	-0.7
2,100,561	+		IAI47_09920	0.19	-0.9
2,100,562	-		IAI47_09920	0.20	+0.8
2,100,562	-		IAI47_09920	0.20	-2.1
2,100,577	-		IAI47_09920	0.20	+0.9
2,100,577	-		IAI47_09920	0.20	+0.1
2,100,588	+		IAI47_09920	0.21	+1.6
2,100,588	+		IAI47_09920	0.21	-0.3
2,100,589	-		IAI47_09920	0.21	+2.0
2,100,589	-		IAI47_09920	0.21	-0.1
2,100,589	-		IAI47_09920	0.21	+2.6
2,100,598	-		IAI47_09920	0.21	+0.4
2,100,609	+		IAI47_09920	0.22	-1.5
2,100,609	+		IAI47_09920	0.22	-0.5
2,100,609	+		IAI47_09920	0.22	-1.1
2,100,629	+		IAI47_09920	0.23	-0.5
2,100,629	+		IAI47_09920	0.23	+1.8
2,100,629	+		IAI47_09920	0.23	-0.8
2,100,630	-		IAI47_09920	0.23	+1.1
2,100,630	-		IAI47_09920	0.23	+0.2
2,100,669	+		IAI47_09920	0.25	+1.6
2,100,753	+		IAI47_09920	0.29	+1.4
2,100,754	-		IAI47_09920	0.29	-0.3
2,100,754	-		IAI47_09920	0.29	+0.1
2,100,814	+		IAI47_09920	0.32	-1.0
2,100,814	+		IAI47_09920	0.32	-1.3
2,100,834	+		IAI47_09920	0.33	-0.2
2,100,834	+		IAI47_09920	0.33	+0.8
2,100,834	+		IAI47_09920	0.33	+1.9
2,100,834	+		IAI47_09920	0.33	-1.9
2,100,835	-		IAI47_09920	0.33	-1.9
2,100,835	-		IAI47_09920	0.33	+0.7
2,100,877	+		IAI47_09920	0.35	+1.8
2,100,878	-		IAI47_09920	0.35	-0.1
2,100,878	-		IAI47_09920	0.35	+1.2
2,100,878	-		IAI47_09920	0.35	+0.7
2,100,920	+		IAI47_09920	0.37	+0.3
2,100,921	-		IAI47_09920	0.37	+1.8
2,100,921	-		IAI47_09920	0.37	+0.0
2,100,921	-		IAI47_09920	0.37	-1.0
2,101,002	+		IAI47_09920	0.41	+2.3
2,101,002	+		IAI47_09920	0.41	-0.5
2,101,002	+		IAI47_09920	0.41	-0.6
2,101,002	+		IAI47_09920	0.41	-1.4
2,101,003	-		IAI47_09920	0.41	+1.8
2,101,005	+		IAI47_09920	0.41	+1.0
2,101,006	-		IAI47_09920	0.41	-1.0
2,101,006	-		IAI47_09920	0.41	-1.8
2,101,011	+		IAI47_09920	0.41	+2.8
2,101,011	+		IAI47_09920	0.41	+0.0
2,101,085	+		IAI47_09920	0.45	+3.1
2,101,139	+		IAI47_09920	0.48	-1.4
2,101,139	+		IAI47_09920	0.48	+0.8
2,101,139	+		IAI47_09920	0.48	-0.2
2,101,139	+		IAI47_09920	0.48	-1.8
2,101,140	-		IAI47_09920	0.48	+0.2
2,101,140	-		IAI47_09920	0.48	+1.8
2,101,143	+		IAI47_09920	0.48	-0.3
2,101,143	+		IAI47_09920	0.48	-1.1
2,101,143	+		IAI47_09920	0.48	+1.4
2,101,143	+		IAI47_09920	0.48	+0.2
2,101,144	-		IAI47_09920	0.48	-0.2
2,101,156	+		IAI47_09920	0.49	-0.1
2,101,239	+		IAI47_09920	0.53	+2.7
2,101,239	+		IAI47_09920	0.53	+1.1
2,101,239	+		IAI47_09920	0.53	-0.9
2,101,239	+		IAI47_09920	0.53	+2.3
2,101,239	+		IAI47_09920	0.53	-0.2
2,101,239	+		IAI47_09920	0.53	+0.0
2,101,240	-		IAI47_09920	0.53	+0.2
2,101,362	+		IAI47_09920	0.59	+0.7
2,101,362	+		IAI47_09920	0.59	+0.6
2,101,363	-		IAI47_09920	0.59	-1.9
2,101,363	-		IAI47_09920	0.59	+0.0
2,101,456	+		IAI47_09920	0.63	-1.3
2,101,456	+		IAI47_09920	0.63	-0.3
2,101,457	-		IAI47_09920	0.63	+2.8
2,101,457	-		IAI47_09920	0.63	+0.2
2,101,457	-		IAI47_09920	0.63	+0.7
2,101,458	+		IAI47_09920	0.63	+0.0
2,101,459	-		IAI47_09920	0.63	+1.2
2,101,459	-		IAI47_09920	0.63	+1.0
2,101,485	+		IAI47_09920	0.65	+0.0
2,101,486	-		IAI47_09920	0.65	-1.8
2,101,486	-		IAI47_09920	0.65	+0.5
2,101,486	-		IAI47_09920	0.65	-1.1
2,101,486	-		IAI47_09920	0.65	+1.1
2,101,486	-		IAI47_09920	0.65	-0.2
2,101,486	-		IAI47_09920	0.65	+1.0
2,101,490	+		IAI47_09920	0.65	+0.5
2,101,490	+		IAI47_09920	0.65	-1.0
2,101,490	+		IAI47_09920	0.65	+1.1
2,101,491	-		IAI47_09920	0.65	+0.4
2,101,491	-		IAI47_09920	0.65	-0.2
2,101,532	+		IAI47_09920	0.67	-1.0
2,101,532	+		IAI47_09920	0.67	+2.1
2,101,533	-		IAI47_09920	0.67	-0.8
2,101,533	-		IAI47_09920	0.67	-2.5
2,101,548	+		IAI47_09920	0.68	+1.2
2,101,563	+		IAI47_09920	0.68	+0.1
2,101,563	+		IAI47_09920	0.68	-0.2
2,101,564	-		IAI47_09920	0.68	+0.0
2,101,585	-		IAI47_09920	0.70	+0.0
2,101,621	+		IAI47_09920	0.71	+2.0
2,101,621	+		IAI47_09920	0.71	+0.2
2,101,621	+		IAI47_09920	0.71	+1.7
2,101,621	+		IAI47_09920	0.71	-0.2
2,101,621	+		IAI47_09920	0.71	-0.2
2,101,621	+		IAI47_09920	0.71	+1.1
2,101,621	+		IAI47_09920	0.71	-2.3
2,101,621	+		IAI47_09920	0.71	+0.0
2,101,621	+		IAI47_09920	0.71	-0.8
2,101,621	+		IAI47_09920	0.71	+0.0
2,101,621	+		IAI47_09920	0.71	-0.5
2,101,621	+		IAI47_09920	0.71	+1.8
2,101,621	+		IAI47_09920	0.71	+0.9
2,101,622	-		IAI47_09920	0.71	+3.1
2,101,622	-		IAI47_09920	0.71	-1.8
2,101,622	-		IAI47_09920	0.71	+1.0
2,101,622	-		IAI47_09920	0.71	-1.0
2,101,622	-		IAI47_09920	0.71	-0.2
2,101,622	-		IAI47_09920	0.71	+0.0
2,101,677	+		IAI47_09920	0.74	+0.0
2,101,677	+		IAI47_09920	0.74	+0.5
2,101,776	+		IAI47_09920	0.79	-1.9
2,101,776	+		IAI47_09920	0.79	-0.3
2,101,795	-		IAI47_09920	0.80	-1.1
2,101,795	-		IAI47_09920	0.80	-2.4
2,101,795	-		IAI47_09920	0.80	+1.8
2,101,795	-		IAI47_09920	0.80	-0.6
2,101,827	+		IAI47_09920	0.81	-0.3
2,101,827	+		IAI47_09920	0.81	+1.6
2,101,827	+		IAI47_09920	0.81	+1.4
2,101,828	-		IAI47_09920	0.81	-0.6
2,101,828	-		IAI47_09920	0.81	-0.4
2,101,857	+		IAI47_09920	0.83	-0.3
2,101,857	+		IAI47_09920	0.83	+0.2
2,101,857	+		IAI47_09920	0.83	-0.6
2,101,858	-		IAI47_09920	0.83	-0.9
2,101,870	-		IAI47_09920	0.83	+2.8
2,101,909	+		IAI47_09920	0.85	-1.4
2,101,938	+		IAI47_09920	0.87	-0.3
2,101,938	+		IAI47_09920	0.87	-1.1
2,101,938	+		IAI47_09920	0.87	-2.0
2,101,939	-		IAI47_09920	0.87	+0.2
2,101,939	-		IAI47_09920	0.87	+0.4
2,101,939	-		IAI47_09920	0.87	+2.1
2,101,945	+		IAI47_09920	0.87	+0.2
2,101,945	+		IAI47_09920	0.87	+1.1
2,101,945	+		IAI47_09920	0.87	+1.5
2,101,946	-		IAI47_09920	0.87	-0.5
2,101,964	-		IAI47_09920	0.88	-0.3
2,101,995	+		IAI47_09920	0.90	-0.3
2,102,026	+				-1.8
2,102,027	-				+3.4
2,102,057	+				-1.2
2,102,057	+				+0.0
2,102,058	-				-1.6
2,102,096	+				-1.9
2,102,096	+				-0.1
2,102,096	+				-0.5
2,102,096	+				-1.9
2,102,097	-				-0.5
2,102,150	+				-0.7
2,102,150	+				-0.2
2,102,150	+				+1.2
2,102,151	-				-1.4
2,102,166	+				+2.6
2,102,166	+				+0.2
2,102,206	+				-1.1
2,102,207	-				+1.2
2,102,249	+				+1.1
2,102,249	+				+1.8
2,102,252	+				-0.9
2,102,253	-				+0.5
2,102,272	+				-0.3
2,102,285	-				+1.5
2,102,291	+				-0.5
2,102,292	-				+0.5
2,102,335	+				+0.1
2,102,335	+				-1.3
2,102,335	+				+0.4
2,102,376	+				-0.5
2,102,376	+				+0.6
2,102,377	-				-0.6
2,102,377	-				+0.0
2,102,377	-				+2.4
2,102,398	+				-1.3
2,102,400	+				-0.4
2,102,426	+				+0.4
2,102,509	-				-2.2
2,102,549	+				-1.1
2,102,549	+				+1.0
2,102,550	-				+0.8
2,102,550	-				+2.3
2,102,550	-				+3.6
2,102,570	-				+0.2
2,102,570	-				-0.6
2,102,591	+		IAI47_09925	0.13	-0.5
2,102,591	+		IAI47_09925	0.13	+1.3
2,102,591	+		IAI47_09925	0.13	+0.2
2,102,592	-		IAI47_09925	0.13	-1.3
2,102,592	-		IAI47_09925	0.13	-1.2
2,102,592	-		IAI47_09925	0.13	-1.3
2,102,594	+		IAI47_09925	0.14	+0.2
2,102,615	-		IAI47_09925	0.20	+0.1
2,102,636	+		IAI47_09925	0.26	+0.2
2,102,691	+		IAI47_09925	0.43	+0.2
2,102,692	-		IAI47_09925	0.43	-0.3
2,102,692	-		IAI47_09925	0.43	+0.0
2,102,699	+		IAI47_09925	0.45	-0.6
2,102,699	+		IAI47_09925	0.45	-1.7
2,102,699	+		IAI47_09925	0.45	-0.6
2,102,700	-		IAI47_09925	0.45	-0.8
2,102,700	-		IAI47_09925	0.45	-1.3
2,102,700	-		IAI47_09925	0.45	-1.2
2,102,707	+		IAI47_09925	0.47	-2.1
2,102,708	-		IAI47_09925	0.48	-1.3
2,102,774	+		IAI47_09925	0.67	+0.1
2,102,774	+		IAI47_09925	0.67	-1.5
2,102,774	+		IAI47_09925	0.67	-0.2
2,102,774	+		IAI47_09925	0.67	-1.0
2,102,774	+		IAI47_09925	0.67	-1.3
2,102,774	+		IAI47_09925	0.67	-0.3
2,102,774	+		IAI47_09925	0.67	-0.1
2,102,775	-		IAI47_09925	0.68	+0.7
2,102,775	-		IAI47_09925	0.68	-2.7
2,102,775	-		IAI47_09925	0.68	+1.2
2,102,830	-		IAI47_09925	0.84	+0.4
2,102,830	-		IAI47_09925	0.84	+0.8
2,102,830	-		IAI47_09925	0.84	+0.0
2,102,864	+				-0.2
2,102,872	+				+0.4
2,102,872	+				-1.1
2,102,873	-				+0.2
2,102,873	-				-1.0
2,102,873	-				+0.1
2,102,873	-				-0.8
2,102,915	-				+0.0
2,102,978	-				-1.0
2,102,978	-				-1.3
2,103,012	-				-1.1
2,103,044	+				-1.3
2,103,044	+				+0.1
2,103,045	-				+1.8
2,103,045	-				+0.4
2,103,045	-				-1.1
2,103,109	+				+1.2
2,103,110	-				+0.4
2,103,112	-				-0.3
2,103,129	+				-0.9
2,103,129	+				+1.2
2,103,129	+				-0.5
2,103,154	+				-1.3