Strain Fitness in Pantoea sp. MT58 around IAI47_09915

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,097,697	-		IAI47_09905	0.73	-1.1
2,097,733	+		IAI47_09905	0.75	-1.2
2,097,733	+		IAI47_09905	0.75	-2.6
2,097,733	+		IAI47_09905	0.75	-1.3
2,097,734	-		IAI47_09905	0.75	+2.0
2,097,734	-		IAI47_09905	0.75	-1.3
2,097,930	+				+2.0
2,097,930	+				-0.2
2,097,931	-				-0.8
2,097,931	-				+1.5
2,097,993	+				+0.5
2,098,026	+				+2.4
2,098,027	-				+0.6
2,098,027	-				+0.1
2,098,027	-				+1.8
2,098,027	-				-0.5
2,098,074	+				-0.2
2,098,074	+				-1.1
2,098,075	-				+2.0
2,098,075	-				-1.3
2,098,075	-				+1.1
2,098,075	-				+1.0
2,098,075	-				-0.3
2,098,075	-				-1.0
2,098,075	-				-1.0
2,098,121	+				+2.9
2,098,121	+				-0.8
2,098,121	+				-1.4
2,098,121	+				+0.0
2,098,121	+				+0.8
2,098,121	+				+0.2
2,098,121	+				+0.8
2,098,121	+				-1.5
2,098,121	+				+2.1
2,098,121	+				-0.8
2,098,121	+				-0.2
2,098,121	+				-0.0
2,098,122	-				-0.6
2,098,122	-				-0.1
2,098,122	-				+0.0
2,098,122	-				+0.2
2,098,127	+				+1.2
2,098,127	+				+1.3
2,098,127	+				+1.2
2,098,127	+				+0.2
2,098,127	+				-0.2
2,098,128	-				+0.9
2,098,128	-				-0.3
2,098,128	-				+1.6
2,098,128	-				+0.7
2,098,128	-				-0.2
2,098,140	+				+0.4
2,098,140	+				-0.0
2,098,151	+				+1.2
2,098,151	+				-0.6
2,098,151	+				+0.1
2,098,151	+				+0.8
2,098,152	-				+0.2
2,098,152	-				+1.4
2,098,152	-				-0.3
2,098,152	-				+0.0
2,098,157	+				-0.1
2,098,157	+				-0.3
2,098,157	+				+1.7
2,098,158	-				+1.1
2,098,159	-				-1.6
2,098,314	+		IAI47_09910	0.75	-0.1
2,098,362	+				+0.8
2,098,362	+				+0.5
2,098,362	+				-2.8
2,098,363	-				+0.2
2,098,363	-				-0.5
2,098,365	+				+1.7
2,098,366	-				+2.6
2,098,380	+				+2.6
2,098,380	+				-0.6
2,098,396	+				+2.1
2,098,397	-				-0.6
2,098,404	+				-1.8
2,098,404	+				+0.8
2,098,404	+				+1.0
2,098,404	+				-0.3
2,098,404	+				+0.2
2,098,404	+				+1.6
2,098,405	-				+1.1
2,098,405	-				+1.8
2,098,405	-				-0.9
2,098,405	-				+0.3
2,098,405	-				+0.4
2,098,408	+				-1.0
2,098,408	+				+0.2
2,098,408	+				+1.8
2,098,408	+				+0.2
2,098,409	-				-1.3
2,098,409	-				+0.7
2,098,409	-				-1.1
2,098,409	-				-0.1
2,098,409	-				-1.1
2,098,431	+				-0.1
2,098,432	-				-0.2
2,098,503	+				+0.3
2,098,534	+				-0.5
2,098,534	+				+2.8
2,098,535	-				+0.7
2,098,536	+				+0.6
2,098,536	+				+2.2
2,098,536	+				-0.3
2,098,536	+				-0.8
2,098,536	+				+0.1
2,098,536	+				-1.5
2,098,536	-				+1.8
2,098,537	-				+1.2
2,098,572	+				+0.0
2,098,572	+				+0.4
2,098,572	+				+1.0
2,098,572	+				-0.8
2,098,572	-				+2.4
2,098,573	-				+0.7
2,098,573	-				-0.3
2,098,596	-				-0.3
2,098,596	-				+0.5
2,098,596	-				-1.5
2,098,596	-				+0.0
2,098,609	+				-0.6
2,098,610	-				+1.1
2,098,610	-				+0.2
2,098,615	+				-0.8
2,098,616	-				+0.8
2,098,665	+				-0.3
2,098,773	+				-2.1
2,098,773	+				+1.1
2,098,777	-				-0.3
2,098,815	+		IAI47_09915	0.11	+0.5
2,098,815	+		IAI47_09915	0.11	-0.8
2,098,816	-		IAI47_09915	0.11	-1.0
2,098,816	-		IAI47_09915	0.11	+1.1
2,098,816	-		IAI47_09915	0.11	-0.2
2,098,816	-		IAI47_09915	0.11	-0.8
2,098,816	-		IAI47_09915	0.11	+4.4
2,098,819	+		IAI47_09915	0.11	-0.8
2,098,819	+		IAI47_09915	0.11	-0.6
2,098,820	-		IAI47_09915	0.11	+1.3
2,098,820	-		IAI47_09915	0.11	+1.6
2,098,820	-		IAI47_09915	0.11	-1.1
2,098,820	-		IAI47_09915	0.11	+3.0
2,098,820	-		IAI47_09915	0.11	-0.3
2,098,921	+		IAI47_09915	0.18	+1.6
2,098,921	+		IAI47_09915	0.18	+1.1
2,098,921	+		IAI47_09915	0.18	-1.0
2,098,921	+		IAI47_09915	0.18	-0.9
2,098,921	+		IAI47_09915	0.18	+0.5
2,098,921	+		IAI47_09915	0.18	+1.1
2,098,921	+		IAI47_09915	0.18	+0.0
2,098,921	+		IAI47_09915	0.18	+0.4
2,098,921	+		IAI47_09915	0.18	-1.2
2,098,922	-		IAI47_09915	0.19	-0.1
2,098,922	-		IAI47_09915	0.19	+1.2
2,098,922	-		IAI47_09915	0.19	-0.9
2,098,922	-		IAI47_09915	0.19	-1.5
2,098,922	-		IAI47_09915	0.19	+0.0
2,098,922	-		IAI47_09915	0.19	+0.7
2,098,922	-		IAI47_09915	0.19	+0.7
2,098,922	-		IAI47_09915	0.19	-1.2
2,098,922	-		IAI47_09915	0.19	+0.6
2,098,923	+		IAI47_09915	0.19	+2.6
2,098,923	+		IAI47_09915	0.19	-1.3
2,098,923	+		IAI47_09915	0.19	+1.2
2,098,924	-		IAI47_09915	0.19	+0.8
2,098,924	-		IAI47_09915	0.19	+0.5
2,098,924	-		IAI47_09915	0.19	+0.5
2,098,924	-		IAI47_09915	0.19	-0.6
2,098,924	-		IAI47_09915	0.19	+0.8
2,098,924	-		IAI47_09915	0.19	+2.4
2,098,924	-		IAI47_09915	0.19	-0.2
2,098,944	-		IAI47_09915	0.20	-0.6
2,098,944	-		IAI47_09915	0.20	+2.8
2,099,007	+		IAI47_09915	0.25	+0.3
2,099,008	-		IAI47_09915	0.25	+1.2
2,099,049	-		IAI47_09915	0.28	-0.9
2,099,049	-		IAI47_09915	0.28	-0.5
2,099,212	-		IAI47_09915	0.39	+3.8
2,099,212	-		IAI47_09915	0.39	+0.2
2,099,241	-		IAI47_09915	0.42	-1.2
2,099,241	-		IAI47_09915	0.42	-0.0
2,099,267	-		IAI47_09915	0.43	-1.2
2,099,321	+		IAI47_09915	0.47	-0.8
2,099,321	+		IAI47_09915	0.47	+0.0
2,099,321	+		IAI47_09915	0.47	+1.3
2,099,322	-		IAI47_09915	0.47	+2.2
2,099,322	-		IAI47_09915	0.47	-0.6
2,099,322	-		IAI47_09915	0.47	-1.5
2,099,348	+		IAI47_09915	0.49	-0.8
2,099,379	+		IAI47_09915	0.52	+0.8
2,099,379	+		IAI47_09915	0.52	-1.5
2,099,379	+		IAI47_09915	0.52	+2.6
2,099,380	-		IAI47_09915	0.52	-1.7
2,099,380	-		IAI47_09915	0.52	-0.6
2,099,382	+		IAI47_09915	0.52	-1.3
2,099,382	+		IAI47_09915	0.52	+0.1
2,099,382	+		IAI47_09915	0.52	-0.2
2,099,382	+		IAI47_09915	0.52	+1.2
2,099,383	-		IAI47_09915	0.52	-0.9
2,099,383	-		IAI47_09915	0.52	-1.8
2,099,434	+		IAI47_09915	0.56	+1.5
2,099,434	+		IAI47_09915	0.56	+1.0
2,099,478	+		IAI47_09915	0.59	+1.0
2,099,478	+		IAI47_09915	0.59	+0.0
2,099,479	-		IAI47_09915	0.59	-1.6
2,099,479	-		IAI47_09915	0.59	+0.8
2,099,481	+		IAI47_09915	0.59	-1.1
2,099,482	-		IAI47_09915	0.59	-0.1
2,099,489	-		IAI47_09915	0.60	+1.4
2,099,489	-		IAI47_09915	0.60	-0.3
2,099,490	+		IAI47_09915	0.60	-1.1
2,099,491	-		IAI47_09915	0.60	-1.0
2,099,519	-		IAI47_09915	0.62	+1.2
2,099,519	-		IAI47_09915	0.62	-1.4
2,099,519	-		IAI47_09915	0.62	+1.5
2,099,587	+		IAI47_09915	0.67	+0.8
2,099,587	+		IAI47_09915	0.67	+0.7
2,099,587	+		IAI47_09915	0.67	+1.9
2,099,588	+		IAI47_09915	0.67	+0.1
2,099,588	-		IAI47_09915	0.67	+0.5
2,099,590	+		IAI47_09915	0.67	-1.0
2,099,590	+		IAI47_09915	0.67	-0.9
2,099,591	-		IAI47_09915	0.67	-2.2
2,099,591	-		IAI47_09915	0.67	-2.0
2,099,591	-		IAI47_09915	0.67	+1.2
2,099,591	-		IAI47_09915	0.67	-0.6
2,099,631	+		IAI47_09915	0.70	-0.5
2,099,650	+		IAI47_09915	0.71	+0.5
2,099,650	+		IAI47_09915	0.71	+1.5
2,099,651	-		IAI47_09915	0.71	-1.3
2,099,651	-		IAI47_09915	0.71	-0.6
2,099,686	+		IAI47_09915	0.74	+0.6
2,099,686	+		IAI47_09915	0.74	-1.0
2,099,686	+		IAI47_09915	0.74	-1.7
2,099,687	-		IAI47_09915	0.74	-2.2
2,099,687	-		IAI47_09915	0.74	-1.4
2,099,687	-		IAI47_09915	0.74	-0.1
2,099,687	-		IAI47_09915	0.74	+0.7
2,099,735	+		IAI47_09915	0.77	+1.2
2,099,735	+		IAI47_09915	0.77	+0.0
2,099,735	+		IAI47_09915	0.77	-0.3
2,099,771	+		IAI47_09915	0.80	+1.0
2,099,772	-		IAI47_09915	0.80	-0.5
2,099,782	-		IAI47_09915	0.81	-1.1
2,099,800	-		IAI47_09915	0.82	+0.7
2,099,836	-		IAI47_09915	0.85	+1.2
2,099,836	-		IAI47_09915	0.85	-1.0
2,099,844	+		IAI47_09915	0.85	-1.2
2,099,913	+				+1.5
2,099,913	+				+3.6
2,099,932	+				+1.1
2,099,932	+				-0.7
2,099,933	-				-0.8
2,099,933	-				+0.0
2,099,933	-				+0.0
2,099,988	+				+0.5
2,099,988	+				+0.5
2,099,989	-				+0.1
2,099,989	-				+0.5
2,099,989	-				-0.9
2,099,990	-				-1.9
2,099,998	+				-0.8
2,099,998	+				-1.6
2,099,998	+				+1.9
2,099,998	+				+0.3
2,099,999	-				+0.4
2,099,999	-				-0.5
2,099,999	-				+0.8
2,100,002	+				-0.8
2,100,002	+				+2.2
2,100,003	-				+1.1
2,100,003	-				-1.4
2,100,046	+				-1.0
2,100,078	+				+0.5
2,100,086	-				-0.7
2,100,102	+				+1.1
2,100,128	-				+0.2
2,100,223	-				+0.7
2,100,249	+				-1.8
2,100,304	+				-1.8
2,100,304	+				+1.1
2,100,382	+		IAI47_09920	0.11	+0.3
2,100,382	+		IAI47_09920	0.11	-1.4
2,100,383	-		IAI47_09920	0.11	+0.1
2,100,408	-		IAI47_09920	0.12	-1.0
2,100,451	+		IAI47_09920	0.14	-0.1
2,100,484	+		IAI47_09920	0.16	-0.8
2,100,484	+		IAI47_09920	0.16	-1.8
2,100,485	-		IAI47_09920	0.16	-0.8
2,100,485	-		IAI47_09920	0.16	-1.3
2,100,493	-		IAI47_09920	0.16	-0.2
2,100,541	-		IAI47_09920	0.18	-2.2
2,100,558	+		IAI47_09920	0.19	-0.4
2,100,559	-		IAI47_09920	0.19	+0.1
2,100,559	-		IAI47_09920	0.19	-0.6
2,100,559	-		IAI47_09920	0.19	-1.6
2,100,559	-		IAI47_09920	0.19	+0.8
2,100,559	-		IAI47_09920	0.19	+0.2
2,100,559	-		IAI47_09920	0.19	-1.0
2,100,559	-		IAI47_09920	0.19	+0.4
2,100,561	+		IAI47_09920	0.19	-0.7
2,100,561	+		IAI47_09920	0.19	-0.9
2,100,562	-		IAI47_09920	0.20	+0.8
2,100,562	-		IAI47_09920	0.20	-2.1
2,100,577	-		IAI47_09920	0.20	+0.9
2,100,577	-		IAI47_09920	0.20	+0.1
2,100,588	+		IAI47_09920	0.21	+1.6
2,100,588	+		IAI47_09920	0.21	-0.3
2,100,589	-		IAI47_09920	0.21	+2.0
2,100,589	-		IAI47_09920	0.21	-0.1
2,100,589	-		IAI47_09920	0.21	+2.6
2,100,598	-		IAI47_09920	0.21	+0.4
2,100,609	+		IAI47_09920	0.22	-1.5
2,100,609	+		IAI47_09920	0.22	-0.5
2,100,609	+		IAI47_09920	0.22	-1.1
2,100,629	+		IAI47_09920	0.23	-0.5
2,100,629	+		IAI47_09920	0.23	+1.8
2,100,629	+		IAI47_09920	0.23	-0.8
2,100,630	-		IAI47_09920	0.23	+1.1
2,100,630	-		IAI47_09920	0.23	+0.2
2,100,669	+		IAI47_09920	0.25	+1.6
2,100,753	+		IAI47_09920	0.29	+1.4
2,100,754	-		IAI47_09920	0.29	-0.3
2,100,754	-		IAI47_09920	0.29	+0.1
2,100,814	+		IAI47_09920	0.32	-1.0
2,100,814	+		IAI47_09920	0.32	-1.3
2,100,834	+		IAI47_09920	0.33	-0.2
2,100,834	+		IAI47_09920	0.33	+0.8
2,100,834	+		IAI47_09920	0.33	+1.9
2,100,834	+		IAI47_09920	0.33	-1.9
2,100,835	-		IAI47_09920	0.33	-1.9
2,100,835	-		IAI47_09920	0.33	+0.7
2,100,877	+		IAI47_09920	0.35	+1.8
2,100,878	-		IAI47_09920	0.35	-0.1
2,100,878	-		IAI47_09920	0.35	+1.2
2,100,878	-		IAI47_09920	0.35	+0.7
2,100,920	+		IAI47_09920	0.37	+0.3
2,100,921	-		IAI47_09920	0.37	+1.8
2,100,921	-		IAI47_09920	0.37	+0.0
2,100,921	-		IAI47_09920	0.37	-1.0
2,101,002	+		IAI47_09920	0.41	+2.3
2,101,002	+		IAI47_09920	0.41	-0.5
2,101,002	+		IAI47_09920	0.41	-0.6
2,101,002	+		IAI47_09920	0.41	-1.4
2,101,003	-		IAI47_09920	0.41	+1.8
2,101,005	+		IAI47_09920	0.41	+1.0
2,101,006	-		IAI47_09920	0.41	-1.0
2,101,006	-		IAI47_09920	0.41	-1.8
2,101,011	+		IAI47_09920	0.41	+2.8
2,101,011	+		IAI47_09920	0.41	+0.0