Strain Fitness in Pantoea sp. MT58 around IAI47_09635

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,038,293	-		IAI47_09625	0.75	-1.6
2,038,456	-				-0.6
2,038,488	+				-1.1
2,038,488	+				-0.7
2,038,533	+				+0.9
2,038,533	+				+0.9
2,038,533	+				+0.1
2,038,565	+				+1.5
2,038,566	-				+0.0
2,038,566	-				+2.5
2,038,572	-				+2.9
2,038,572	-				-0.5
2,038,587	+				-0.5
2,038,587	+				+1.5
2,038,608	+				-1.5
2,038,608	+				+1.5
2,038,609	-				+3.2
2,038,609	-				+1.7
2,038,623	+		IAI47_09630	0.11	+0.3
2,038,623	+		IAI47_09630	0.11	-1.3
2,038,624	-		IAI47_09630	0.11	-0.3
2,038,625	+		IAI47_09630	0.11	+0.5
2,038,626	-		IAI47_09630	0.12	-0.8
2,038,635	+		IAI47_09630	0.14	-1.4
2,038,639	-		IAI47_09630	0.14	+0.1
2,038,681	+		IAI47_09630	0.23	-0.2
2,038,723	+		IAI47_09630	0.32	-1.7
2,038,738	-		IAI47_09630	0.35	+2.2
2,038,740	+		IAI47_09630	0.35	+0.8
2,038,741	-		IAI47_09630	0.36	+0.9
2,038,741	-		IAI47_09630	0.36	+0.9
2,038,741	-		IAI47_09630	0.36	-1.5
2,038,749	-		IAI47_09630	0.37	-0.4
2,038,807	+		IAI47_09630	0.49	+0.1
2,038,808	-		IAI47_09630	0.50	-0.3
2,038,873	-		IAI47_09630	0.63	-2.2
2,038,873	-		IAI47_09630	0.63	+0.5
2,038,873	-		IAI47_09630	0.63	-2.6
2,038,873	-		IAI47_09630	0.63	-0.7
2,038,954	+		IAI47_09630	0.80	+0.5
2,038,954	+		IAI47_09630	0.80	-1.0
2,038,955	-		IAI47_09630	0.80	-1.5
2,038,955	-		IAI47_09630	0.80	-1.8
2,038,955	-		IAI47_09630	0.80	+0.4
2,039,029	+				+1.3
2,039,030	-				+0.5
2,039,050	-				-1.1
2,039,056	-				-0.6
2,039,430	-		IAI47_09635	0.20	+0.1
2,039,433	-		IAI47_09635	0.20	+0.9
2,039,433	-		IAI47_09635	0.20	-1.3
2,039,508	+		IAI47_09635	0.31	+0.3
2,039,536	-		IAI47_09635	0.35	+1.3
2,039,536	-		IAI47_09635	0.35	-0.1
2,039,546	+		IAI47_09635	0.37	+0.1
2,039,547	-		IAI47_09635	0.37	+0.8
2,039,629	+		IAI47_09635	0.49	-1.0
2,039,629	+		IAI47_09635	0.49	-0.3
2,039,630	-		IAI47_09635	0.49	-1.3
2,039,630	-		IAI47_09635	0.49	-2.0
2,039,630	-		IAI47_09635	0.49	+2.1
2,039,633	+		IAI47_09635	0.49	-1.5
2,039,633	+		IAI47_09635	0.49	-0.3
2,039,634	-		IAI47_09635	0.49	+0.4
2,039,634	-		IAI47_09635	0.49	+0.9
2,039,640	-		IAI47_09635	0.50	+1.0
2,039,696	+		IAI47_09635	0.58	-1.2
2,039,839	-		IAI47_09635	0.79	-0.7
2,039,868	-		IAI47_09635	0.83	+0.7
2,039,983	+				-1.0
2,039,984	-				+0.5
2,040,047	+				-0.1
2,040,051	+				+1.9
2,040,061	+				+1.6
2,040,099	+				+0.4
2,040,099	+				+0.9
2,040,135	-				+0.7
2,040,253	+				-1.8
2,040,253	+				+1.2
2,040,254	-				+0.9
2,040,254	-				+1.4
2,040,254	-				+0.3
2,040,254	-				+1.9
2,040,257	+				+1.8
2,040,257	+				+0.6
2,040,257	+				-0.6
2,040,257	+				+0.8
2,040,257	+				-0.2
2,040,257	+				+2.7
2,040,257	+				+3.0
2,040,258	-				+1.9
2,040,258	-				+1.3
2,040,258	-				-1.0
2,040,259	+				-1.0
2,040,259	+				+0.6
2,040,259	+				+0.2
2,040,259	+				+1.3
2,040,259	+				-1.1
2,040,260	-				+0.1
2,040,260	-				-1.2
2,040,260	-				-1.4
2,040,260	-				-0.3
2,040,260	-				+0.7
2,040,260	-				-0.7
2,040,260	-				-1.2
2,040,260	-				+3.2
2,040,260	-				-0.7
2,040,336	+				+0.2
2,040,337	-				-0.1
2,040,534	+		IAI47_09640	0.21	+1.3
2,040,534	+		IAI47_09640	0.21	-0.2
2,040,534	+		IAI47_09640	0.21	-0.3
2,040,534	+		IAI47_09640	0.21	-1.2
2,040,535	-		IAI47_09640	0.21	+0.9
2,040,542	+		IAI47_09640	0.22	-1.4
2,040,542	+		IAI47_09640	0.22	-2.2
2,040,543	-		IAI47_09640	0.22	-0.8
2,040,546	+		IAI47_09640	0.22	+1.3
2,040,546	+		IAI47_09640	0.22	+0.2
2,040,547	-		IAI47_09640	0.22	-0.3
2,040,705	+		IAI47_09640	0.35	+1.4
2,040,714	+		IAI47_09640	0.36	+1.7
2,040,714	+		IAI47_09640	0.36	+0.9
2,040,714	+		IAI47_09640	0.36	+1.9
2,040,714	+		IAI47_09640	0.36	+2.4
2,040,715	-		IAI47_09640	0.36	-0.7
2,040,715	-		IAI47_09640	0.36	-0.7
2,040,715	-		IAI47_09640	0.36	-0.1
2,040,716	+		IAI47_09640	0.36	-0.5
2,040,716	+		IAI47_09640	0.36	-0.3
2,040,716	+		IAI47_09640	0.36	-0.1
2,040,716	+		IAI47_09640	0.36	+0.2
2,040,716	+		IAI47_09640	0.36	-0.7
2,040,717	-		IAI47_09640	0.36	-1.3
2,040,771	+		IAI47_09640	0.40	+0.9
2,040,771	+		IAI47_09640	0.40	+0.1
2,040,771	+		IAI47_09640	0.40	+0.6
2,040,772	-		IAI47_09640	0.40	-0.8
2,040,772	-		IAI47_09640	0.40	-0.9
2,040,772	-		IAI47_09640	0.40	-1.8
2,040,772	-		IAI47_09640	0.40	+0.9
2,040,772	-		IAI47_09640	0.40	-1.6
2,040,772	-		IAI47_09640	0.40	-1.3
2,040,773	+		IAI47_09640	0.40	+0.5
2,040,773	+		IAI47_09640	0.40	-0.1
2,040,773	+		IAI47_09640	0.40	+0.9
2,040,773	+		IAI47_09640	0.40	+0.6
2,040,773	+		IAI47_09640	0.40	-1.9
2,040,773	+		IAI47_09640	0.40	+1.3
2,040,773	+		IAI47_09640	0.40	+0.6
2,040,774	-		IAI47_09640	0.41	-1.6
2,040,774	-		IAI47_09640	0.41	-0.5
2,040,774	-		IAI47_09640	0.41	-0.4
2,040,774	-		IAI47_09640	0.41	-0.1
2,040,774	-		IAI47_09640	0.41	+1.6
2,040,774	-		IAI47_09640	0.41	+1.5
2,040,774	-		IAI47_09640	0.41	+0.1
2,040,774	-		IAI47_09640	0.41	-0.8
2,040,774	-		IAI47_09640	0.41	+0.2
2,040,774	-		IAI47_09640	0.41	+0.2
2,040,774	-		IAI47_09640	0.41	+0.9
2,040,774	-		IAI47_09640	0.41	+2.4
2,040,774	-		IAI47_09640	0.41	+1.6
2,040,881	+		IAI47_09640	0.49	-0.9
2,040,881	+		IAI47_09640	0.49	-1.9
2,040,881	+		IAI47_09640	0.49	+0.7
2,040,881	+		IAI47_09640	0.49	+1.5
2,040,882	-		IAI47_09640	0.49	+1.1
2,040,883	+		IAI47_09640	0.49	-0.3
2,040,883	+		IAI47_09640	0.49	+0.1
2,040,883	+		IAI47_09640	0.49	+1.1
2,040,883	+		IAI47_09640	0.49	-0.1
2,040,884	-		IAI47_09640	0.49	+0.9
2,040,884	-		IAI47_09640	0.49	-0.1
2,040,933	+		IAI47_09640	0.53	-0.1