Strain Fitness in Pantoea sp. MT58 around IAI47_09090

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,920,272	-				-1.5
1,920,272	-				+0.6
1,920,275	+				-1.4
1,920,275	+				+1.5
1,920,275	+				+1.4
1,920,275	+				+1.9
1,920,275	+				-1.7
1,920,276	-				+0.1
1,920,276	-				+0.7
1,920,276	-				+0.8
1,920,289	+				-0.4
1,920,324	-		IAI47_09085	0.11	+0.4
1,920,476	+		IAI47_09085	0.26	+0.4
1,920,477	-		IAI47_09085	0.26	-0.8
1,920,513	-		IAI47_09085	0.29	-0.3
1,920,513	-		IAI47_09085	0.29	+1.0
1,920,513	-		IAI47_09085	0.29	+0.3
1,920,573	+		IAI47_09085	0.35	+1.0
1,920,573	+		IAI47_09085	0.35	+1.0
1,920,573	+		IAI47_09085	0.35	+2.1
1,920,574	-		IAI47_09085	0.35	+0.6
1,920,574	-		IAI47_09085	0.35	+0.4
1,920,574	-		IAI47_09085	0.35	+0.3
1,920,575	+		IAI47_09085	0.35	+1.1
1,920,576	-		IAI47_09085	0.35	+0.8
1,920,576	-		IAI47_09085	0.35	+1.3
1,920,576	-		IAI47_09085	0.35	-1.1
1,920,576	-		IAI47_09085	0.35	-0.7
1,920,608	+		IAI47_09085	0.39	+0.2
1,920,608	+		IAI47_09085	0.39	+0.3
1,920,608	+		IAI47_09085	0.39	-0.8
1,920,608	+		IAI47_09085	0.39	-0.2
1,920,608	+		IAI47_09085	0.39	+1.9
1,920,608	+		IAI47_09085	0.39	+0.3
1,920,608	+		IAI47_09085	0.39	-0.8
1,920,609	-		IAI47_09085	0.39	+1.7
1,920,609	-		IAI47_09085	0.39	-0.5
1,920,609	-		IAI47_09085	0.39	-0.4
1,920,656	-		IAI47_09085	0.43	+0.1
1,920,709	-		IAI47_09085	0.48	+0.9
1,920,803	+		IAI47_09085	0.58	+0.3
1,920,837	-		IAI47_09085	0.61	+0.9
1,920,837	-		IAI47_09085	0.61	-0.5
1,920,837	-		IAI47_09085	0.61	-0.3
1,920,881	+		IAI47_09085	0.65	+0.9
1,920,881	+		IAI47_09085	0.65	+0.9
1,920,882	-		IAI47_09085	0.65	-0.9
1,920,942	+		IAI47_09085	0.71	-1.2
1,920,942	+		IAI47_09085	0.71	+0.2
1,920,942	+		IAI47_09085	0.71	-0.3
1,920,943	-		IAI47_09085	0.71	-0.3
1,920,943	-		IAI47_09085	0.71	+0.7
1,920,943	-		IAI47_09085	0.71	-0.8
1,920,943	-		IAI47_09085	0.71	+1.9
1,920,956	+		IAI47_09085	0.73	-2.7
1,920,956	+		IAI47_09085	0.73	+1.2
1,920,957	-		IAI47_09085	0.73	+0.3
1,920,963	+		IAI47_09085	0.73	+2.9
1,920,987	+		IAI47_09085	0.76	+0.8
1,920,987	+		IAI47_09085	0.76	+0.5
1,920,987	+		IAI47_09085	0.76	-0.6
1,920,988	-		IAI47_09085	0.76	-0.3
1,921,005	+		IAI47_09085	0.78	+0.1
1,921,005	+		IAI47_09085	0.78	-1.1
1,921,022	+		IAI47_09085	0.79	-0.7
1,921,148	+				-2.2
1,921,148	+				+1.3
1,921,208	+				+1.9
1,921,225	+				+1.5
1,921,225	+				-1.5
1,921,225	+				+0.5
1,921,225	+				+1.3
1,921,226	-				-0.3
1,921,226	-				+1.3
1,921,226	-				+0.5
1,921,226	-				+0.9
1,921,228	+				-0.0
1,921,228	+				+0.4
1,921,228	+				+0.1
1,921,228	+				+0.8
1,921,228	+				-2.1
1,921,228	+				+0.1
1,921,229	-				-1.2
1,921,229	-				+0.5
1,921,229	-				+1.1
1,921,229	-				-1.9
1,921,229	-				-0.3
1,921,229	-				+1.0
1,921,229	-				-0.3
1,921,229	-				-2.1
1,921,239	+				+1.1
1,921,240	-				+0.7
1,921,257	+				+1.5
1,921,258	-				+2.3
1,921,294	+				+0.9
1,921,294	+				-0.6
1,921,295	-				+0.2
1,921,295	-				-1.1
1,921,295	-				-1.5
1,921,295	-				+0.3
1,921,295	-				+0.3
1,921,367	+		IAI47_09090	0.14	+0.3
1,921,367	+		IAI47_09090	0.14	+0.5
1,921,367	+		IAI47_09090	0.14	-0.5
1,921,367	+		IAI47_09090	0.14	+0.9
1,921,367	+		IAI47_09090	0.14	-0.7
1,921,368	-		IAI47_09090	0.14	+1.9
1,921,368	-		IAI47_09090	0.14	-1.4
1,921,368	-		IAI47_09090	0.14	+1.3
1,921,368	-		IAI47_09090	0.14	+1.7
1,921,368	-		IAI47_09090	0.14	+0.7
1,921,368	-		IAI47_09090	0.14	-0.6
1,921,368	-		IAI47_09090	0.14	-0.8
1,921,448	-		IAI47_09090	0.22	-1.3
1,921,476	+		IAI47_09090	0.25	+4.5
1,921,477	-		IAI47_09090	0.25	-0.8
1,921,542	+		IAI47_09090	0.31	+0.2
1,921,543	-		IAI47_09090	0.31	-1.4
1,921,612	+		IAI47_09090	0.38	+1.3
1,921,612	+		IAI47_09090	0.38	-1.5
1,921,616	+		IAI47_09090	0.39	-0.6
1,921,616	+		IAI47_09090	0.39	+1.3
1,921,616	+		IAI47_09090	0.39	+2.1
1,921,616	+		IAI47_09090	0.39	+1.5
1,921,616	+		IAI47_09090	0.39	-2.3
1,921,616	+		IAI47_09090	0.39	+0.2
1,921,616	+		IAI47_09090	0.39	-0.5
1,921,616	+		IAI47_09090	0.39	+0.2
1,921,616	+		IAI47_09090	0.39	+0.1
1,921,616	+		IAI47_09090	0.39	+2.6
1,921,616	+		IAI47_09090	0.39	-0.3
1,921,617	-		IAI47_09090	0.39	+0.4
1,921,617	-		IAI47_09090	0.39	+0.2
1,921,617	-		IAI47_09090	0.39	+0.1
1,921,617	-		IAI47_09090	0.39	+1.1
1,921,617	-		IAI47_09090	0.39	-1.8
1,921,617	-		IAI47_09090	0.39	+0.7
1,921,663	+		IAI47_09090	0.43	+0.5
1,921,783	+		IAI47_09090	0.55	-0.1
1,921,783	+		IAI47_09090	0.55	-0.5
1,921,940	+		IAI47_09090	0.71	+0.6
1,921,940	+		IAI47_09090	0.71	+0.4
1,921,940	+		IAI47_09090	0.71	+0.5
1,921,940	+		IAI47_09090	0.71	+0.9
1,921,940	+		IAI47_09090	0.71	-0.7
1,921,940	+		IAI47_09090	0.71	+0.8
1,921,940	+		IAI47_09090	0.71	+1.7
1,921,940	+		IAI47_09090	0.71	-1.3
1,921,941	-		IAI47_09090	0.71	-0.3
1,921,941	-		IAI47_09090	0.71	-1.2
1,921,970	+		IAI47_09090	0.74	-0.8
1,921,970	+		IAI47_09090	0.74	+1.4
1,921,970	+		IAI47_09090	0.74	-1.4
1,921,970	+		IAI47_09090	0.74	-0.6
1,921,971	-		IAI47_09090	0.74	-0.9
1,921,971	-		IAI47_09090	0.74	-0.7
1,921,971	-		IAI47_09090	0.74	-1.1
1,921,982	+		IAI47_09090	0.75	-0.2
1,921,982	+		IAI47_09090	0.75	-2.0
1,921,983	-		IAI47_09090	0.75	-1.9
1,921,983	-		IAI47_09090	0.75	+0.1
1,921,983	-		IAI47_09090	0.75	+1.5
1,922,003	+		IAI47_09090	0.77	+0.3
1,922,003	+		IAI47_09090	0.77	-0.1
1,922,003	+		IAI47_09090	0.77	+1.1
1,922,003	+		IAI47_09090	0.77	-0.3
1,922,003	+		IAI47_09090	0.77	-1.2
1,922,003	+		IAI47_09090	0.77	-1.0
1,922,003	+		IAI47_09090	0.77	+1.3
1,922,003	+		IAI47_09090	0.77	+2.9
1,922,004	-		IAI47_09090	0.77	-1.0
1,922,028	+		IAI47_09090	0.80	-0.1
1,922,122	-		IAI47_09090	0.89	-0.3
1,922,122	-		IAI47_09090	0.89	-0.3
1,922,122	-		IAI47_09090	0.89	+0.9
1,922,226	+				+0.3
1,922,226	+				-1.1
1,922,226	+				-0.5
1,922,227	-				-0.7
1,922,228	+				+1.2
1,922,228	+				+1.2
1,922,229	-				+1.3
1,922,229	-				-0.0
1,922,265	-				-0.6
1,922,280	+				-0.8
1,922,280	+				+0.5
1,922,280	+				-0.1
1,922,281	-				+1.3
1,922,296	+				+0.5
1,922,296	+				-0.6
1,922,296	+				-1.0
1,922,296	+				-1.0
1,922,297	-				+4.0
1,922,297	-				-1.0
1,922,297	-				-1.8
1,922,548	+		IAI47_09095	0.83	-1.9
1,922,548	+		IAI47_09095	0.83	-0.2
1,922,553	+		IAI47_09095	0.85	-1.7
1,922,553	+		IAI47_09095	0.85	+0.5
1,922,553	+		IAI47_09095	0.85	-1.3
1,922,553	+		IAI47_09095	0.85	-1.8
1,922,553	+		IAI47_09095	0.85	-1.4
1,922,553	+		IAI47_09095	0.85	+0.1
1,922,554	-		IAI47_09095	0.85	-1.5
1,922,554	-		IAI47_09095	0.85	+0.6
1,922,554	-		IAI47_09095	0.85	-1.0
1,922,554	-		IAI47_09095	0.85	+0.9
1,922,554	-		IAI47_09095	0.85	-1.1
1,922,554	-		IAI47_09095	0.85	-0.3
1,922,554	-		IAI47_09095	0.85	-1.0
1,922,591	-				-1.7
1,922,602	+				+1.8
1,922,602	+				-0.1
1,922,603	-				-2.3
1,922,603	-				-1.2
1,922,603	-				+2.1
1,922,603	-				+0.9
1,922,603	-				+2.0
1,922,630	+				+0.4
1,922,631	-				-0.8
1,922,631	-				+0.5
1,922,649	+				+1.4
1,922,649	+				-1.2
1,922,655	-				-1.1
1,922,670	+				-2.1
1,922,751	+				-1.1
1,922,751	+				-1.7
1,922,751	+				-1.3
1,922,751	+				-0.9
1,922,751	+				-0.1
1,922,751	+				-0.8
1,922,752	-				+0.9
1,922,752	-				-1.7
1,922,752	-				+0.1
1,922,752	-				-1.2
1,922,752	-				-2.1
1,922,752	-				-1.9
1,922,752	-				-1.5
1,922,752	-				-1.2
1,922,828	+		IAI47_09100	0.12	+1.5
1,922,828	+		IAI47_09100	0.12	+0.5
1,922,829	-		IAI47_09100	0.12	-1.8
1,922,829	-		IAI47_09100	0.12	-0.1
1,922,893	+		IAI47_09100	0.17	+0.9
1,922,893	+		IAI47_09100	0.17	-0.6
1,922,893	+		IAI47_09100	0.17	-1.1
1,922,894	-		IAI47_09100	0.17	-1.5
1,922,894	-		IAI47_09100	0.17	-1.9
1,922,894	-		IAI47_09100	0.17	-0.2
1,922,894	-		IAI47_09100	0.17	-2.1
1,922,922	+		IAI47_09100	0.19	-1.9
1,923,049	+		IAI47_09100	0.27	-1.4
1,923,049	+		IAI47_09100	0.27	-1.2
1,923,049	+		IAI47_09100	0.27	-2.0
1,923,050	-		IAI47_09100	0.28	+0.3
1,923,050	-		IAI47_09100	0.28	-1.8
1,923,050	-		IAI47_09100	0.28	-0.1
1,923,050	-		IAI47_09100	0.28	-1.8
1,923,050	-		IAI47_09100	0.28	-0.8
1,923,077	+		IAI47_09100	0.29	+0.1
1,923,077	+		IAI47_09100	0.29	-1.1
1,923,077	+		IAI47_09100	0.29	-2.0
1,923,077	+		IAI47_09100	0.29	-0.1
1,923,077	+		IAI47_09100	0.29	+2.3
1,923,078	-		IAI47_09100	0.29	-1.3
1,923,078	-		IAI47_09100	0.29	-2.1
1,923,078	-		IAI47_09100	0.29	-2.7
1,923,078	-		IAI47_09100	0.29	-0.0
1,923,078	-		IAI47_09100	0.29	+0.3
1,923,081	+		IAI47_09100	0.30	-1.2
1,923,081	+		IAI47_09100	0.30	-1.3
1,923,082	-		IAI47_09100	0.30	-3.5
1,923,082	-		IAI47_09100	0.30	-2.3
1,923,082	-		IAI47_09100	0.30	+0.5
1,923,148	+		IAI47_09100	0.34	-0.1
1,923,148	+		IAI47_09100	0.34	-0.1
1,923,148	+		IAI47_09100	0.34	-0.6
1,923,149	-		IAI47_09100	0.34	-0.8
1,923,149	-		IAI47_09100	0.34	-1.8
1,923,149	-		IAI47_09100	0.34	-1.8
1,923,149	-		IAI47_09100	0.34	-1.0
1,923,149	-		IAI47_09100	0.34	-0.8
1,923,149	-		IAI47_09100	0.34	-1.1
1,923,149	-		IAI47_09100	0.34	-4.1
1,923,149	-		IAI47_09100	0.34	-0.1
1,923,149	-		IAI47_09100	0.34	-0.1