Strain Fitness in Pantoea sp. MT58 around IAI47_07820

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,653,455	+		IAI47_07810	0.86	+1.3
1,653,455	+		IAI47_07810	0.86	-1.2
1,653,486	-		IAI47_07810	0.90	+2.2
1,653,514	+				+1.5
1,653,514	+				-0.2
1,653,515	-				+2.9
1,653,515	-				-2.3
1,653,515	-				+1.4
1,653,528	-				+0.1
1,653,528	-				-0.6
1,653,533	-				-2.0
1,653,533	-				-0.1
1,653,585	+				+0.4
1,653,585	+				-0.1
1,653,585	+				-0.3
1,653,645	-				+1.5
1,653,657	+				+0.9
1,653,657	+				-1.9
1,653,657	+				+0.9
1,653,657	+				-0.4
1,653,658	-				+2.0
1,653,686	+		IAI47_07815	0.13	-2.2
1,653,686	+		IAI47_07815	0.13	+0.8
1,653,687	-		IAI47_07815	0.13	-0.1
1,653,687	-		IAI47_07815	0.13	-1.8
1,653,687	-		IAI47_07815	0.13	-0.1
1,653,687	-		IAI47_07815	0.13	+1.7
1,653,687	-		IAI47_07815	0.13	+1.3
1,653,687	-		IAI47_07815	0.13	+0.6
1,653,687	-		IAI47_07815	0.13	+0.5
1,653,687	-		IAI47_07815	0.13	+0.4
1,653,687	-		IAI47_07815	0.13	+0.7
1,653,689	+		IAI47_07815	0.13	+2.2
1,653,689	+		IAI47_07815	0.13	-0.4
1,653,689	+		IAI47_07815	0.13	+0.1
1,653,689	+		IAI47_07815	0.13	-1.3
1,653,689	+		IAI47_07815	0.13	+1.2
1,653,689	+		IAI47_07815	0.13	-1.6
1,653,689	+		IAI47_07815	0.13	-0.6
1,653,689	+		IAI47_07815	0.13	+0.7
1,653,689	+		IAI47_07815	0.13	+2.7
1,653,690	-		IAI47_07815	0.13	+1.3
1,653,690	-		IAI47_07815	0.13	+0.3
1,653,690	-		IAI47_07815	0.13	+0.7
1,653,690	-		IAI47_07815	0.13	+1.1
1,653,708	+		IAI47_07815	0.15	+1.8
1,653,708	+		IAI47_07815	0.15	+0.4
1,653,709	-		IAI47_07815	0.15	-0.2
1,653,709	-		IAI47_07815	0.15	-0.6
1,653,761	+		IAI47_07815	0.21	-0.4
1,653,762	-		IAI47_07815	0.21	+1.8
1,653,762	-		IAI47_07815	0.21	+1.2
1,653,762	-		IAI47_07815	0.21	-0.1
1,653,840	+		IAI47_07815	0.30	-0.0
1,653,840	+		IAI47_07815	0.30	+1.0
1,653,840	+		IAI47_07815	0.30	+0.9
1,653,841	-		IAI47_07815	0.30	+0.3
1,653,975	+		IAI47_07815	0.46	-0.1
1,653,975	+		IAI47_07815	0.46	-1.1
1,654,008	+		IAI47_07815	0.49	+1.3
1,654,009	-		IAI47_07815	0.49	+0.7
1,654,009	-		IAI47_07815	0.49	-0.9
1,654,058	-		IAI47_07815	0.55	+2.4
1,654,223	+		IAI47_07815	0.74	-0.8
1,654,240	+		IAI47_07815	0.75	+2.1
1,654,295	+		IAI47_07815	0.82	+0.5
1,654,296	-		IAI47_07815	0.82	+1.3
1,654,296	-		IAI47_07815	0.82	-1.6
1,654,406	+				-0.6
1,654,406	+				+2.3
1,654,406	+				-0.3
1,654,406	+				+0.9
1,654,407	-				-0.1
1,654,407	-				+0.3
1,654,407	-				-0.4
1,654,485	+				-0.4
1,654,486	-				+0.3
1,654,486	-				-0.7
1,654,486	-				+0.8
1,654,580	+				-0.4
1,654,581	-				-1.4
1,654,641	-				-0.4
1,654,653	+				+0.3
1,654,745	-		IAI47_07820	0.13	+1.3
1,654,956	+		IAI47_07820	0.21	-1.2
1,654,956	+		IAI47_07820	0.21	+0.7
1,654,957	-		IAI47_07820	0.21	-2.1
1,654,957	-		IAI47_07820	0.21	+0.0
1,654,957	-		IAI47_07820	0.21	+0.0
1,654,957	-		IAI47_07820	0.21	-0.3
1,654,957	-		IAI47_07820	0.21	-0.9
1,654,957	-		IAI47_07820	0.21	-0.7
1,654,957	-		IAI47_07820	0.21	-0.6
1,654,987	+		IAI47_07820	0.22	-0.2
1,654,988	-		IAI47_07820	0.22	-0.1
1,655,283	-		IAI47_07820	0.33	+0.3
1,655,369	-		IAI47_07820	0.37	+0.1
1,655,528	+		IAI47_07820	0.43	+1.8
1,655,529	-		IAI47_07820	0.43	+1.6
1,655,529	-		IAI47_07820	0.43	+2.3
1,655,609	+		IAI47_07820	0.46	+2.3
1,655,633	+		IAI47_07820	0.47	-0.3
1,655,634	-		IAI47_07820	0.47	+0.6
1,655,634	-		IAI47_07820	0.47	-1.3
1,655,681	+		IAI47_07820	0.49	+1.0
1,655,682	-		IAI47_07820	0.49	-1.0
1,655,812	+		IAI47_07820	0.54	+0.7
1,655,812	+		IAI47_07820	0.54	-0.1
1,655,812	+		IAI47_07820	0.54	+2.6
1,655,901	-		IAI47_07820	0.57	+3.1
1,655,946	-		IAI47_07820	0.59	-1.5
1,655,946	-		IAI47_07820	0.59	+2.0
1,656,091	+		IAI47_07820	0.64	-1.8
1,656,092	-		IAI47_07820	0.64	+0.6
1,656,092	-		IAI47_07820	0.64	+1.1
1,656,097	+		IAI47_07820	0.64	+1.3
1,656,097	+		IAI47_07820	0.64	+2.7
1,656,097	+		IAI47_07820	0.64	-1.4
1,656,098	-		IAI47_07820	0.64	-1.0
1,656,098	-		IAI47_07820	0.64	+0.1
1,656,098	-		IAI47_07820	0.64	-1.7
1,656,098	-		IAI47_07820	0.64	-0.7
1,656,098	-		IAI47_07820	0.64	-2.4
1,656,098	-		IAI47_07820	0.64	+2.7
1,656,110	-		IAI47_07820	0.65	-2.1
1,656,149	+		IAI47_07820	0.66	+0.8
1,656,149	+		IAI47_07820	0.66	-0.0
1,656,191	+		IAI47_07820	0.68	+0.1
1,656,236	+		IAI47_07820	0.70	-0.1
1,656,237	-		IAI47_07820	0.70	+0.0
1,656,266	+		IAI47_07820	0.71	-0.1
1,656,267	-		IAI47_07820	0.71	+1.7
1,656,267	-		IAI47_07820	0.71	+0.3
1,656,267	-		IAI47_07820	0.71	+2.3
1,656,543	-		IAI47_07820	0.81	+0.8
1,656,629	+		IAI47_07820	0.85	-2.3
1,656,630	-		IAI47_07820	0.85	+1.6
1,656,630	-		IAI47_07820	0.85	-0.5
1,656,633	-		IAI47_07820	0.85	+0.7
1,656,778	+				+0.5
1,656,778	+				-1.2
1,656,779	-				-0.9
1,656,779	-				+1.4
1,656,867	-				+2.3
1,656,867	-				+1.3
1,656,942	+				+0.6
1,656,942	+				+1.0
1,656,943	-				-1.0
1,656,943	-				+0.3
1,656,943	-				+1.8
1,657,016	-				-0.8
1,657,041	+				+1.9
1,657,041	+				+1.6
1,657,042	-				-0.9
1,657,042	-				-0.1
1,657,065	+				+2.3
1,657,065	+				+0.7
1,657,067	+				+0.1
1,657,067	+				+0.1
1,657,068	-				-1.8
1,657,068	-				-1.1
1,657,090	-				+2.6
1,657,098	+				-0.3
1,657,098	+				+0.6
1,657,098	+				-1.3
1,657,141	-				+0.8
1,657,192	+				+0.4
1,657,192	+				-1.7
1,657,193	-				-0.3
1,657,212	-				+0.7
1,657,307	+				-0.7
1,657,308	-				-0.2
1,657,341	+		IAI47_07825	0.11	-0.3
1,657,341	+		IAI47_07825	0.11	+2.7
1,657,341	+		IAI47_07825	0.11	+3.2
1,657,342	-		IAI47_07825	0.11	+0.9
1,657,342	-		IAI47_07825	0.11	-0.3
1,657,342	-		IAI47_07825	0.11	-2.1
1,657,342	-		IAI47_07825	0.11	+0.8
1,657,342	-		IAI47_07825	0.11	+2.9
1,657,342	-		IAI47_07825	0.11	+2.3
1,657,366	+		IAI47_07825	0.13	+0.8
1,657,377	-		IAI47_07825	0.13	-0.5
1,657,424	+		IAI47_07825	0.16	-1.8
1,657,424	+		IAI47_07825	0.16	-0.7
1,657,425	-		IAI47_07825	0.16	+1.3
1,657,434	+		IAI47_07825	0.17	-0.1
1,657,591	+		IAI47_07825	0.27	+0.7
1,657,591	+		IAI47_07825	0.27	+0.1
1,657,669	+		IAI47_07825	0.33	+1.6
1,657,669	+		IAI47_07825	0.33	-0.4
1,657,698	-		IAI47_07825	0.34	-0.6
1,657,726	+		IAI47_07825	0.36	+1.1
1,657,726	+		IAI47_07825	0.36	+0.2
1,657,727	-		IAI47_07825	0.36	+0.9
1,657,727	-		IAI47_07825	0.36	-0.3
1,657,760	+		IAI47_07825	0.39	+0.9
1,657,761	-		IAI47_07825	0.39	-0.1
1,657,761	-		IAI47_07825	0.39	+0.2
1,657,764	+		IAI47_07825	0.39	-1.7
1,657,764	+		IAI47_07825	0.39	+0.2
1,657,764	+		IAI47_07825	0.39	-0.3
1,657,765	-		IAI47_07825	0.39	-2.1
1,657,765	-		IAI47_07825	0.39	-1.0
1,657,765	-		IAI47_07825	0.39	+0.7
1,657,765	-		IAI47_07825	0.39	-0.3
1,657,765	-		IAI47_07825	0.39	+0.8
1,657,791	+		IAI47_07825	0.41	+0.6
1,657,791	+		IAI47_07825	0.41	-1.1
1,657,791	+		IAI47_07825	0.41	-0.6
1,657,791	+		IAI47_07825	0.41	+0.4
1,657,791	+		IAI47_07825	0.41	-3.0
1,657,791	+		IAI47_07825	0.41	-0.3
1,657,791	+		IAI47_07825	0.41	-0.6
1,657,791	+		IAI47_07825	0.41	+0.2
1,657,791	+		IAI47_07825	0.41	-0.8
1,657,792	-		IAI47_07825	0.41	+0.6
1,657,792	-		IAI47_07825	0.41	+1.3
1,657,833	+		IAI47_07825	0.43	+2.0
1,657,833	+		IAI47_07825	0.43	+0.2
1,657,833	+		IAI47_07825	0.43	+2.2
1,657,833	+		IAI47_07825	0.43	-0.9
1,657,833	+		IAI47_07825	0.43	-0.8
1,657,833	+		IAI47_07825	0.43	-1.1
1,657,834	-		IAI47_07825	0.43	+0.3
1,657,834	-		IAI47_07825	0.43	+2.0
1,657,834	-		IAI47_07825	0.43	-0.9
1,657,834	-		IAI47_07825	0.43	-1.5
1,657,834	-		IAI47_07825	0.43	-0.8
1,657,834	-		IAI47_07825	0.43	+0.4
1,657,834	-		IAI47_07825	0.43	+1.0
1,657,916	+		IAI47_07825	0.49	-0.7
1,657,917	-		IAI47_07825	0.49	-0.3
1,657,970	+		IAI47_07825	0.52	-0.2
1,657,970	+		IAI47_07825	0.52	-0.1
1,657,970	+		IAI47_07825	0.52	+2.2
1,657,970	+		IAI47_07825	0.52	+0.9
1,657,971	-		IAI47_07825	0.52	-1.4