Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_04670 and IAI47_04675 are separated by 174 nucleotides IAI47_04675 and IAI47_04680 are separated by 504 nucleotides
IAI47_04670: IAI47_04670 - catecholate siderophore receptor CirA, at 984,017 to 985,990
_04670
IAI47_04675: IAI47_04675 - oxalate/formate MFS antiporter, at 986,165 to 987,439
_04675
IAI47_04680: IAI47_04680 - hypothetical protein, at 987,944 to 988,498
_04680
Position (kb) 986
987
988 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 985.184 kb on + strand, within IAI47_04670 at 985.184 kb on + strand, within IAI47_04670 at 985.185 kb on - strand, within IAI47_04670 at 985.185 kb on - strand, within IAI47_04670 at 985.185 kb on - strand, within IAI47_04670 at 985.211 kb on + strand, within IAI47_04670 at 985.211 kb on + strand, within IAI47_04670 at 985.211 kb on + strand, within IAI47_04670 at 985.212 kb on - strand, within IAI47_04670 at 985.212 kb on - strand, within IAI47_04670 at 985.212 kb on - strand, within IAI47_04670 at 985.348 kb on + strand, within IAI47_04670 at 985.394 kb on + strand, within IAI47_04670 at 985.394 kb on + strand, within IAI47_04670 at 985.394 kb on + strand, within IAI47_04670 at 985.395 kb on - strand, within IAI47_04670 at 985.395 kb on - strand, within IAI47_04670 at 985.395 kb on - strand, within IAI47_04670 at 985.395 kb on - strand, within IAI47_04670 at 985.397 kb on + strand, within IAI47_04670 at 985.398 kb on - strand, within IAI47_04670 at 985.398 kb on - strand, within IAI47_04670 at 985.398 kb on - strand, within IAI47_04670 at 985.398 kb on - strand, within IAI47_04670 at 985.429 kb on + strand, within IAI47_04670 at 985.429 kb on + strand, within IAI47_04670 at 985.474 kb on + strand, within IAI47_04670 at 985.475 kb on - strand, within IAI47_04670 at 985.475 kb on - strand, within IAI47_04670 at 985.475 kb on - strand, within IAI47_04670 at 985.475 kb on - strand, within IAI47_04670 at 985.515 kb on - strand, within IAI47_04670 at 985.562 kb on + strand, within IAI47_04670 at 985.562 kb on + strand, within IAI47_04670 at 985.565 kb on + strand, within IAI47_04670 at 985.565 kb on + strand, within IAI47_04670 at 985.565 kb on + strand, within IAI47_04670 at 985.565 kb on + strand, within IAI47_04670 at 985.566 kb on - strand, within IAI47_04670 at 985.566 kb on - strand, within IAI47_04670 at 985.566 kb on - strand, within IAI47_04670 at 985.566 kb on - strand, within IAI47_04670 at 985.576 kb on + strand, within IAI47_04670 at 985.576 kb on + strand, within IAI47_04670 at 985.577 kb on - strand, within IAI47_04670 at 985.577 kb on - strand, within IAI47_04670 at 985.577 kb on - strand, within IAI47_04670 at 985.649 kb on + strand, within IAI47_04670 at 985.649 kb on + strand, within IAI47_04670 at 985.649 kb on + strand, within IAI47_04670 at 985.650 kb on - strand, within IAI47_04670 at 985.650 kb on - strand, within IAI47_04670 at 985.650 kb on - strand, within IAI47_04670 at 985.650 kb on - strand, within IAI47_04670 at 985.650 kb on - strand, within IAI47_04670 at 985.655 kb on + strand, within IAI47_04670 at 985.655 kb on + strand, within IAI47_04670 at 985.655 kb on + strand, within IAI47_04670 at 985.655 kb on + strand, within IAI47_04670 at 985.655 kb on + strand, within IAI47_04670 at 985.655 kb on + strand, within IAI47_04670 at 985.655 kb on + strand, within IAI47_04670 at 985.655 kb on + strand, within IAI47_04670 at 985.656 kb on - strand, within IAI47_04670 at 985.656 kb on - strand, within IAI47_04670 at 985.656 kb on - strand, within IAI47_04670 at 985.656 kb on - strand, within IAI47_04670 at 985.656 kb on - strand, within IAI47_04670 at 985.656 kb on - strand, within IAI47_04670 at 985.656 kb on - strand, within IAI47_04670 at 985.656 kb on - strand, within IAI47_04670 at 985.656 kb on - strand, within IAI47_04670 at 985.656 kb on - strand, within IAI47_04670 at 985.679 kb on - strand, within IAI47_04670 at 985.767 kb on - strand, within IAI47_04670 at 985.767 kb on - strand, within IAI47_04670 at 985.767 kb on - strand, within IAI47_04670 at 985.781 kb on + strand, within IAI47_04670 at 985.781 kb on + strand, within IAI47_04670 at 985.832 kb on + strand at 985.834 kb on + strand at 985.834 kb on + strand at 985.834 kb on + strand at 985.834 kb on + strand at 985.834 kb on + strand at 985.834 kb on + strand at 985.834 kb on + strand at 985.835 kb on - strand at 985.835 kb on - strand at 985.835 kb on - strand at 985.835 kb on - strand at 985.835 kb on - strand at 985.835 kb on - strand at 985.835 kb on - strand at 985.835 kb on - strand at 985.835 kb on - strand at 985.835 kb on - strand at 985.835 kb on - strand at 985.835 kb on - strand at 985.859 kb on + strand at 985.859 kb on + strand at 985.859 kb on + strand at 985.860 kb on - strand at 985.860 kb on - strand at 985.860 kb on - strand at 985.860 kb on - strand at 985.934 kb on + strand at 985.934 kb on + strand at 985.934 kb on + strand at 985.935 kb on - strand at 985.940 kb on + strand at 985.940 kb on + strand at 985.940 kb on + strand at 985.940 kb on + strand at 985.940 kb on + strand at 985.940 kb on + strand at 985.940 kb on + strand at 985.940 kb on + strand at 985.941 kb on - strand at 985.941 kb on - strand at 985.941 kb on - strand at 985.941 kb on - strand at 985.941 kb on - strand at 985.941 kb on - strand at 985.941 kb on - strand at 985.961 kb on + strand at 985.961 kb on + strand at 985.962 kb on - strand at 985.962 kb on - strand at 985.979 kb on + strand at 985.979 kb on + strand at 985.979 kb on + strand at 985.979 kb on + strand at 986.039 kb on + strand at 986.039 kb on + strand at 986.040 kb on - strand at 986.040 kb on - strand at 986.047 kb on + strand at 986.048 kb on - strand at 986.050 kb on + strand at 986.050 kb on + strand at 986.051 kb on - strand at 986.051 kb on - strand at 986.104 kb on + strand at 986.104 kb on + strand at 986.104 kb on + strand at 986.104 kb on + strand at 986.104 kb on + strand at 986.104 kb on + strand at 986.104 kb on + strand at 986.105 kb on - strand at 986.105 kb on - strand at 986.105 kb on - strand at 986.105 kb on - strand at 986.105 kb on - strand at 986.105 kb on - strand at 986.166 kb on + strand at 986.166 kb on + strand at 986.166 kb on + strand at 986.166 kb on + strand at 986.166 kb on + strand at 986.167 kb on - strand at 986.167 kb on - strand at 986.180 kb on - strand at 986.195 kb on - strand at 986.246 kb on - strand at 986.258 kb on - strand at 986.258 kb on - strand at 986.258 kb on - strand at 986.287 kb on + strand at 986.287 kb on + strand at 986.288 kb on - strand at 986.288 kb on - strand at 986.288 kb on - strand at 986.288 kb on - strand at 986.288 kb on - strand at 986.288 kb on - strand at 986.288 kb on - strand at 986.301 kb on + strand, within IAI47_04675 at 986.302 kb on - strand, within IAI47_04675 at 986.302 kb on - strand, within IAI47_04675 at 986.302 kb on - strand, within IAI47_04675 at 986.302 kb on - strand, within IAI47_04675 at 986.353 kb on + strand, within IAI47_04675 at 986.353 kb on + strand, within IAI47_04675 at 986.353 kb on + strand, within IAI47_04675 at 986.353 kb on + strand, within IAI47_04675 at 986.353 kb on + strand, within IAI47_04675 at 986.353 kb on + strand, within IAI47_04675 at 986.353 kb on + strand, within IAI47_04675 at 986.353 kb on + strand, within IAI47_04675 at 986.353 kb on + strand, within IAI47_04675 at 986.353 kb on + strand, within IAI47_04675 at 986.353 kb on + strand, within IAI47_04675 at 986.353 kb on + strand, within IAI47_04675 at 986.353 kb on + strand, within IAI47_04675 at 986.353 kb on + strand, within IAI47_04675 at 986.354 kb on - strand, within IAI47_04675 at 986.354 kb on - strand, within IAI47_04675 at 986.354 kb on - strand, within IAI47_04675 at 986.354 kb on - strand, within IAI47_04675 at 986.354 kb on - strand, within IAI47_04675 at 986.354 kb on - strand, within IAI47_04675 at 986.354 kb on - strand, within IAI47_04675 at 986.355 kb on + strand, within IAI47_04675 at 986.355 kb on + strand, within IAI47_04675 at 986.355 kb on + strand, within IAI47_04675 at 986.355 kb on + strand, within IAI47_04675 at 986.356 kb on - strand at 986.356 kb on - strand, within IAI47_04675 at 986.367 kb on + strand, within IAI47_04675 at 986.367 kb on + strand, within IAI47_04675 at 986.367 kb on + strand, within IAI47_04675 at 986.368 kb on - strand, within IAI47_04675 at 986.368 kb on - strand, within IAI47_04675 at 986.368 kb on - strand, within IAI47_04675 at 986.429 kb on + strand, within IAI47_04675 at 986.429 kb on + strand, within IAI47_04675 at 986.429 kb on + strand, within IAI47_04675 at 986.430 kb on - strand, within IAI47_04675 at 986.468 kb on + strand, within IAI47_04675 at 986.469 kb on - strand, within IAI47_04675 at 986.469 kb on - strand, within IAI47_04675 at 986.539 kb on + strand, within IAI47_04675 at 986.539 kb on + strand, within IAI47_04675 at 986.539 kb on + strand, within IAI47_04675 at 986.540 kb on - strand, within IAI47_04675 at 986.540 kb on - strand, within IAI47_04675 at 986.540 kb on - strand, within IAI47_04675 at 986.540 kb on - strand, within IAI47_04675 at 986.549 kb on - strand, within IAI47_04675 at 986.648 kb on - strand, within IAI47_04675 at 986.648 kb on - strand, within IAI47_04675 at 986.791 kb on + strand, within IAI47_04675 at 986.811 kb on - strand, within IAI47_04675 at 986.937 kb on + strand, within IAI47_04675 at 986.937 kb on + strand, within IAI47_04675 at 986.937 kb on + strand, within IAI47_04675 at 986.937 kb on + strand, within IAI47_04675 at 986.941 kb on + strand, within IAI47_04675 at 986.941 kb on + strand, within IAI47_04675 at 986.941 kb on + strand, within IAI47_04675 at 986.941 kb on + strand, within IAI47_04675 at 986.941 kb on + strand, within IAI47_04675 at 986.942 kb on - strand, within IAI47_04675 at 986.942 kb on - strand, within IAI47_04675 at 986.942 kb on - strand, within IAI47_04675 at 986.944 kb on + strand, within IAI47_04675 at 986.944 kb on + strand, within IAI47_04675 at 986.944 kb on + strand, within IAI47_04675 at 986.945 kb on - strand, within IAI47_04675 at 986.945 kb on - strand, within IAI47_04675 at 986.945 kb on - strand, within IAI47_04675 at 986.992 kb on - strand, within IAI47_04675 at 987.059 kb on + strand, within IAI47_04675 at 987.067 kb on + strand, within IAI47_04675 at 987.069 kb on + strand, within IAI47_04675 at 987.069 kb on + strand, within IAI47_04675 at 987.069 kb on + strand, within IAI47_04675 at 987.069 kb on + strand, within IAI47_04675 at 987.070 kb on - strand, within IAI47_04675 at 987.070 kb on - strand, within IAI47_04675 at 987.070 kb on - strand, within IAI47_04675 at 987.070 kb on - strand, within IAI47_04675 at 987.070 kb on - strand, within IAI47_04675 at 987.070 kb on - strand, within IAI47_04675 at 987.070 kb on - strand, within IAI47_04675 at 987.105 kb on + strand, within IAI47_04675 at 987.105 kb on + strand, within IAI47_04675 at 987.105 kb on + strand, within IAI47_04675 at 987.105 kb on + strand, within IAI47_04675 at 987.105 kb on + strand, within IAI47_04675 at 987.105 kb on + strand, within IAI47_04675 at 987.106 kb on - strand, within IAI47_04675 at 987.106 kb on - strand, within IAI47_04675 at 987.106 kb on - strand, within IAI47_04675 at 987.106 kb on - strand, within IAI47_04675 at 987.106 kb on - strand, within IAI47_04675 at 987.114 kb on + strand, within IAI47_04675 at 987.114 kb on + strand, within IAI47_04675 at 987.114 kb on + strand, within IAI47_04675 at 987.114 kb on + strand, within IAI47_04675 at 987.114 kb on + strand, within IAI47_04675 at 987.115 kb on - strand, within IAI47_04675 at 987.115 kb on - strand, within IAI47_04675 at 987.115 kb on - strand, within IAI47_04675 at 987.115 kb on - strand, within IAI47_04675 at 987.115 kb on - strand, within IAI47_04675 at 987.115 kb on - strand, within IAI47_04675 at 987.115 kb on - strand, within IAI47_04675 at 987.115 kb on - strand, within IAI47_04675 at 987.115 kb on - strand, within IAI47_04675 at 987.115 kb on - strand, within IAI47_04675 at 987.150 kb on - strand, within IAI47_04675 at 987.253 kb on + strand, within IAI47_04675 at 987.339 kb on + strand at 987.340 kb on - strand at 987.340 kb on - strand at 987.340 kb on - strand at 987.340 kb on - strand at 987.355 kb on + strand at 987.355 kb on + strand at 987.355 kb on + strand at 987.411 kb on - strand at 987.440 kb on + strand at 987.440 kb on + strand at 987.440 kb on + strand at 987.440 kb on + strand at 987.441 kb on - strand at 987.441 kb on - strand at 987.441 kb on - strand at 987.441 kb on - strand at 987.441 kb on - strand at 987.443 kb on + strand at 987.443 kb on + strand at 987.443 kb on + strand at 987.443 kb on + strand at 987.443 kb on + strand at 987.443 kb on + strand at 987.443 kb on + strand at 987.444 kb on - strand at 987.444 kb on - strand at 987.444 kb on - strand at 987.444 kb on - strand at 987.444 kb on - strand at 987.444 kb on - strand at 987.444 kb on - strand at 987.444 kb on - strand at 987.456 kb on + strand at 987.456 kb on + strand at 987.456 kb on + strand at 987.456 kb on + strand at 987.457 kb on - strand at 987.457 kb on - strand at 987.457 kb on - strand at 987.457 kb on - strand at 987.466 kb on + strand at 987.467 kb on - strand at 987.495 kb on - strand at 987.495 kb on - strand at 987.495 kb on - strand at 987.540 kb on + strand at 987.540 kb on + strand at 987.541 kb on - strand at 987.541 kb on - strand at 987.541 kb on - strand at 987.541 kb on - strand at 987.551 kb on + strand at 987.552 kb on - strand at 987.564 kb on - strand at 987.572 kb on - strand at 987.575 kb on + strand at 987.575 kb on + strand at 987.575 kb on + strand at 987.575 kb on + strand at 987.575 kb on + strand at 987.575 kb on + strand at 987.575 kb on + strand at 987.575 kb on + strand at 987.575 kb on + strand at 987.575 kb on + strand at 987.576 kb on - strand at 987.576 kb on - strand at 987.576 kb on - strand at 987.576 kb on - strand at 987.576 kb on - strand at 987.576 kb on - strand at 987.576 kb on - strand at 987.576 kb on - strand at 987.576 kb on - strand at 987.576 kb on - strand at 987.576 kb on - strand at 987.576 kb on - strand at 987.582 kb on - strand at 987.582 kb on - strand at 987.582 kb on - strand at 987.582 kb on - strand at 987.625 kb on + strand at 987.628 kb on + strand at 987.639 kb on - strand at 987.659 kb on + strand at 987.659 kb on + strand at 987.660 kb on - strand at 987.660 kb on - strand at 987.722 kb on + strand at 987.776 kb on + strand at 987.786 kb on + strand at 987.786 kb on + strand at 987.786 kb on + strand at 987.820 kb on + strand at 987.820 kb on + strand at 987.820 kb on + strand at 987.945 kb on + strand at 987.945 kb on + strand at 987.945 kb on + strand at 988.065 kb on + strand, within IAI47_04680 at 988.065 kb on + strand, within IAI47_04680 at 988.065 kb on + strand, within IAI47_04680 at 988.065 kb on + strand, within IAI47_04680 at 988.065 kb on + strand, within IAI47_04680 at 988.065 kb on + strand, within IAI47_04680 at 988.065 kb on + strand, within IAI47_04680 at 988.066 kb on - strand, within IAI47_04680 at 988.076 kb on - strand, within IAI47_04680 at 988.145 kb on + strand, within IAI47_04680 at 988.146 kb on - strand, within IAI47_04680 at 988.146 kb on - strand, within IAI47_04680 at 988.159 kb on + strand, within IAI47_04680 at 988.160 kb on - strand, within IAI47_04680 at 988.160 kb on - strand, within IAI47_04680 at 988.160 kb on - strand, within IAI47_04680 at 988.160 kb on - strand, within IAI47_04680 at 988.201 kb on - strand, within IAI47_04680 at 988.246 kb on - strand, within IAI47_04680 at 988.246 kb on - strand, within IAI47_04680 at 988.250 kb on - strand, within IAI47_04680 at 988.251 kb on + strand, within IAI47_04680 at 988.251 kb on + strand, within IAI47_04680 at 988.251 kb on + strand, within IAI47_04680 at 988.252 kb on - strand, within IAI47_04680 at 988.276 kb on + strand, within IAI47_04680 at 988.277 kb on - strand, within IAI47_04680 at 988.280 kb on - strand, within IAI47_04680 at 988.280 kb on - strand, within IAI47_04680 at 988.280 kb on - strand, within IAI47_04680 at 988.292 kb on - strand, within IAI47_04680 at 988.292 kb on - strand, within IAI47_04680 at 988.292 kb on - strand, within IAI47_04680 at 988.293 kb on + strand, within IAI47_04680 at 988.293 kb on + strand, within IAI47_04680 at 988.293 kb on + strand, within IAI47_04680 at 988.293 kb on + strand, within IAI47_04680 at 988.294 kb on - strand, within IAI47_04680 at 988.294 kb on - strand, within IAI47_04680 at 988.294 kb on - strand, within IAI47_04680 at 988.294 kb on - strand, within IAI47_04680 at 988.294 kb on - strand, within IAI47_04680 at 988.294 kb on - strand, within IAI47_04680 at 988.294 kb on - strand, within IAI47_04680 at 988.310 kb on - strand, within IAI47_04680 at 988.334 kb on + strand, within IAI47_04680 at 988.334 kb on + strand, within IAI47_04680 at 988.334 kb on + strand, within IAI47_04680 at 988.334 kb on + strand, within IAI47_04680 at 988.335 kb on - strand, within IAI47_04680 at 988.335 kb on - strand, within IAI47_04680 at 988.335 kb on - strand, within IAI47_04680 at 988.337 kb on + strand, within IAI47_04680 at 988.338 kb on - strand, within IAI47_04680 at 988.345 kb on + strand, within IAI47_04680 at 988.345 kb on + strand, within IAI47_04680 at 988.346 kb on - strand, within IAI47_04680 at 988.397 kb on - strand, within IAI47_04680 at 988.427 kb on + strand, within IAI47_04680 at 988.428 kb on - strand, within IAI47_04680
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 remove 985,184 + IAI47_04670 0.59 +1.2 985,184 + IAI47_04670 0.59 +0.7 985,185 - IAI47_04670 0.59 +0.2 985,185 - IAI47_04670 0.59 +1.0 985,185 - IAI47_04670 0.59 +0.3 985,211 + IAI47_04670 0.60 -0.8 985,211 + IAI47_04670 0.60 -0.3 985,211 + IAI47_04670 0.60 -0.0 985,212 - IAI47_04670 0.61 -0.6 985,212 - IAI47_04670 0.61 +1.2 985,212 - IAI47_04670 0.61 +0.8 985,348 + IAI47_04670 0.67 +0.7 985,394 + IAI47_04670 0.70 -0.6 985,394 + IAI47_04670 0.70 +0.4 985,394 + IAI47_04670 0.70 +1.3 985,395 - IAI47_04670 0.70 -1.2 985,395 - IAI47_04670 0.70 +1.0 985,395 - IAI47_04670 0.70 +2.8 985,395 - IAI47_04670 0.70 -0.3 985,397 + IAI47_04670 0.70 +2.0 985,398 - IAI47_04670 0.70 +0.8 985,398 - IAI47_04670 0.70 +1.5 985,398 - IAI47_04670 0.70 +4.2 985,398 - IAI47_04670 0.70 -2.2 985,429 + IAI47_04670 0.72 -2.1 985,429 + IAI47_04670 0.72 -0.7 985,474 + IAI47_04670 0.74 -0.2 985,475 - IAI47_04670 0.74 -2.1 985,475 - IAI47_04670 0.74 +0.3 985,475 - IAI47_04670 0.74 -2.8 985,475 - IAI47_04670 0.74 -0.2 985,515 - IAI47_04670 0.76 +0.3 985,562 + IAI47_04670 0.78 -1.9 985,562 + IAI47_04670 0.78 +0.8 985,565 + IAI47_04670 0.78 +0.6 985,565 + IAI47_04670 0.78 +0.5 985,565 + IAI47_04670 0.78 +0.3 985,565 + IAI47_04670 0.78 -0.0 985,566 - IAI47_04670 0.78 +1.7 985,566 - IAI47_04670 0.78 +0.3 985,566 - IAI47_04670 0.78 -0.7 985,566 - IAI47_04670 0.78 +0.3 985,576 + IAI47_04670 0.79 +0.2 985,576 + IAI47_04670 0.79 -2.6 985,577 - IAI47_04670 0.79 +0.3 985,577 - IAI47_04670 0.79 +1.1 985,577 - IAI47_04670 0.79 -1.2 985,649 + IAI47_04670 0.83 +0.5 985,649 + IAI47_04670 0.83 -0.3 985,649 + IAI47_04670 0.83 +2.8 985,650 - IAI47_04670 0.83 -0.8 985,650 - IAI47_04670 0.83 +1.5 985,650 - IAI47_04670 0.83 +0.3 985,650 - IAI47_04670 0.83 +0.4 985,650 - IAI47_04670 0.83 +0.1 985,655 + IAI47_04670 0.83 +1.1 985,655 + IAI47_04670 0.83 -0.8 985,655 + IAI47_04670 0.83 +0.4 985,655 + IAI47_04670 0.83 +1.1 985,655 + IAI47_04670 0.83 +0.9 985,655 + IAI47_04670 0.83 +1.1 985,655 + IAI47_04670 0.83 -0.4 985,655 + IAI47_04670 0.83 -0.8 985,656 - 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Or see this region's nucleotide sequence