Strain Fitness in Pantoea sp. MT58 around IAI47_17920

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,803,607	-		IAI47_17910	0.21	+0.6
3,803,607	-		IAI47_17910	0.21	+0.6
3,803,623	+		IAI47_17910	0.24	-0.1
3,803,659	-		IAI47_17910	0.31	-2.1
3,803,659	-		IAI47_17910	0.31	+0.1
3,803,717	-		IAI47_17910	0.42	+2.7
3,803,717	-		IAI47_17910	0.42	-1.0
3,803,846	-		IAI47_17910	0.67	+2.1
3,803,987	+				-0.8
3,803,988	-				-1.7
3,803,988	-				-0.4
3,803,991	-				-0.1
3,803,991	-				+1.4
3,803,991	-				-0.6
3,803,991	-				+1.2
3,803,991	-				-0.2
3,803,991	-				+0.2
3,803,991	-				-0.2
3,803,991	-				-1.4
3,804,014	-				-0.4
3,804,014	-				+1.6
3,804,014	-				-2.0
3,804,014	-				-0.3
3,804,014	-				+1.4
3,804,014	-				+0.3
3,804,014	-				-0.2
3,804,014	-				+0.2
3,804,014	-				-0.2
3,804,014	-				-1.2
3,804,014	-				-2.2
3,804,014	-				+1.0
3,804,014	-				-1.8
3,804,014	-				+0.2
3,804,014	-				-1.5
3,804,044	-				+1.0
3,804,048	+				+1.4
3,804,101	+				-1.7
3,804,101	+				-1.2
3,804,102	-				-0.7
3,804,170	+		IAI47_17915	0.17	-1.3
3,804,170	+		IAI47_17915	0.17	+1.7
3,804,170	+		IAI47_17915	0.17	+2.0
3,804,171	-		IAI47_17915	0.17	-3.1
3,804,171	-		IAI47_17915	0.17	+1.5
3,804,171	-		IAI47_17915	0.17	-0.5
3,804,171	-		IAI47_17915	0.17	+0.3
3,804,195	+		IAI47_17915	0.23	+2.3
3,804,196	-		IAI47_17915	0.23	+0.5
3,804,239	+		IAI47_17915	0.34	-1.2
3,804,239	+		IAI47_17915	0.34	-1.0
3,804,239	+		IAI47_17915	0.34	-0.2
3,804,239	+		IAI47_17915	0.34	-0.1
3,804,240	-		IAI47_17915	0.34	+1.5
3,804,240	-		IAI47_17915	0.34	+0.8
3,804,248	+		IAI47_17915	0.36	-1.9
3,804,281	+		IAI47_17915	0.44	+1.0
3,804,285	+		IAI47_17915	0.45	+0.6
3,804,285	+		IAI47_17915	0.45	+0.6
3,804,320	+		IAI47_17915	0.54	-0.3
3,804,320	+		IAI47_17915	0.54	-0.3
3,804,320	+		IAI47_17915	0.54	+0.9
3,804,320	+		IAI47_17915	0.54	-0.3
3,804,320	+		IAI47_17915	0.54	+0.7
3,804,321	-		IAI47_17915	0.54	+0.4
3,804,321	-		IAI47_17915	0.54	-0.4
3,804,347	+		IAI47_17915	0.60	-1.2
3,804,409	+		IAI47_17915	0.75	+0.2
3,804,410	-		IAI47_17915	0.75	-1.1
3,804,426	+		IAI47_17915	0.79	+0.4
3,804,443	-		IAI47_17915	0.83	+1.9
3,804,469	+		IAI47_17915	0.90	+0.5
3,804,470	-				+1.3
3,804,521	+				+1.4
3,804,521	+				-0.6
3,804,532	+				-0.1
3,804,532	+				-0.0
3,804,532	+				+0.4
3,804,532	+				-0.4
3,804,533	-				+0.3
3,804,533	-				-1.7
3,804,533	-				+0.4
3,804,533	-				-1.1
3,804,533	-				+0.5
3,804,533	-				-1.0
3,804,533	-				-1.1
3,804,533	-				-0.0
3,804,533	-				+1.3
3,804,533	-				+0.3
3,804,536	-				+1.7
3,804,574	-				+1.4
3,804,612	-				-0.8
3,804,620	+				+0.1
3,804,620	+				-0.5
3,804,621	-				+1.2
3,804,744	+		IAI47_17920	0.23	-0.2
3,804,744	+		IAI47_17920	0.23	-0.6
3,804,750	+		IAI47_17920	0.24	-1.8
3,804,751	-		IAI47_17920	0.24	-1.0
3,804,767	+		IAI47_17920	0.26	-1.1
3,804,775	-		IAI47_17920	0.28	+3.3
3,804,779	+		IAI47_17920	0.28	+1.7
3,804,791	+		IAI47_17920	0.30	+0.7
3,804,791	+		IAI47_17920	0.30	+0.6
3,804,791	+		IAI47_17920	0.30	+3.5
3,804,791	+		IAI47_17920	0.30	+0.5
3,804,792	-		IAI47_17920	0.30	-2.0
3,804,792	-		IAI47_17920	0.30	+2.1
3,804,792	-		IAI47_17920	0.30	+0.7
3,804,792	-		IAI47_17920	0.30	+0.4
3,804,857	+		IAI47_17920	0.39	+1.0
3,804,858	-		IAI47_17920	0.39	+0.5
3,804,858	-		IAI47_17920	0.39	-0.3
3,804,869	+		IAI47_17920	0.41	+0.9
3,804,869	+		IAI47_17920	0.41	+2.4
3,804,869	+		IAI47_17920	0.41	-1.5
3,804,869	+		IAI47_17920	0.41	+1.9
3,804,869	+		IAI47_17920	0.41	-2.1
3,804,869	+		IAI47_17920	0.41	-1.6
3,804,869	+		IAI47_17920	0.41	+0.3
3,804,869	+		IAI47_17920	0.41	+0.2
3,804,870	-		IAI47_17920	0.41	-1.7
3,804,870	-		IAI47_17920	0.41	+1.1
3,804,870	-		IAI47_17920	0.41	+1.0
3,804,870	-		IAI47_17920	0.41	-1.0
3,804,870	-		IAI47_17920	0.41	-1.1
3,804,907	+		IAI47_17920	0.46	-1.1
3,804,907	+		IAI47_17920	0.46	-0.5
3,804,907	+		IAI47_17920	0.46	-0.4
3,804,908	-		IAI47_17920	0.46	-0.8
3,804,908	-		IAI47_17920	0.46	+2.1
3,805,058	+		IAI47_17920	0.68	+2.1
3,805,058	+		IAI47_17920	0.68	-1.0
3,805,058	+		IAI47_17920	0.68	+2.4
3,805,058	+		IAI47_17920	0.68	+0.0
3,805,058	+		IAI47_17920	0.68	+2.3
3,805,058	+		IAI47_17920	0.68	+0.2
3,805,106	+		IAI47_17920	0.74	+0.9
3,805,107	-		IAI47_17920	0.74	-1.1
3,805,107	-		IAI47_17920	0.74	+1.2
3,805,107	-		IAI47_17920	0.74	+0.5
3,805,153	-		IAI47_17920	0.81	-0.8
3,805,180	+		IAI47_17920	0.85	-1.4
3,805,293	+				-2.3
3,805,293	+				-1.4
3,805,293	+				-0.6
3,805,294	-				-0.2
3,805,294	-				-0.4
3,805,294	-				+1.7
3,805,294	-				+2.4
3,805,323	+				+0.1
3,805,324	-				-1.2
3,805,324	-				+0.4
3,805,334	+				-0.8
3,805,334	+				-2.0
3,805,335	-				-0.6
3,805,335	-				+1.8
3,805,335	-				+0.2
3,805,405	+				+0.6
3,805,405	+				-0.3
3,805,406	-				+1.2
3,805,406	-				+1.1
3,805,416	+				-1.2
3,805,416	+				+0.2
3,805,416	+				-2.7
3,805,416	+				+1.4
3,805,416	+				-2.0
3,805,416	+				+2.7
3,805,416	+				-0.9
3,805,416	+				-0.4
3,805,416	+				+0.7
3,805,416	+				-0.5
3,805,417	-				+0.6
3,805,417	-				-0.5
3,805,417	-				+0.5
3,805,418	+				-1.4
3,805,418	+				-1.1
3,805,418	+				+0.9
3,805,418	+				-1.2
3,805,418	+				-0.4
3,805,418	+				-0.8
3,805,418	+				+0.9
3,805,418	+				+1.0
3,805,419	-				-0.7
3,805,419	-				-1.5
3,805,419	-				-0.0
3,805,419	-				+0.6
3,805,419	-				-0.4
3,805,419	-				-0.5
3,805,427	+				-1.6
3,805,427	+				-1.9
3,805,427	+				-0.3
3,805,427	+				+1.1
3,805,427	+				-0.4
3,805,427	+				+0.5
3,805,427	+				+1.5
3,805,427	+				+0.5
3,805,428	-				+1.0
3,805,428	-				-0.7
3,805,428	-				+0.9
3,805,428	-				+1.2
3,805,453	-				+1.0
3,805,475	+				+0.3
3,805,475	+				-1.0
3,805,475	+				+2.2
3,805,475	+				+0.5
3,805,476	-				-0.9
3,805,476	-				-1.0
3,805,476	-				+4.0
3,805,476	-				+1.8
3,805,476	-				-0.5
3,805,476	-				-1.1
3,805,476	-				+0.4
3,805,476	-				+1.9
3,805,506	-				+2.2
3,805,516	+				-0.5
3,805,516	+				-1.8
3,805,516	+				-0.1
3,805,516	+				-0.0
3,805,517	-				-0.3
3,805,517	-				+0.1
3,805,519	+				-0.2
3,805,520	-				-0.7
3,805,531	+				-2.0
3,805,531	+				-1.8
3,805,531	+				-1.7
3,805,531	+				-1.4
3,805,531	+				-0.2
3,805,531	+				+0.0
3,805,531	+				-1.8
3,805,531	+				+0.8
3,805,531	+				-0.1
3,805,532	-				-0.8
3,805,532	-				+0.3
3,805,532	-				-1.2
3,805,655	+		IAI47_17925	0.15	+1.5
3,805,656	-		IAI47_17925	0.15	-2.0
3,805,656	-		IAI47_17925	0.15	-1.9
3,805,656	-		IAI47_17925	0.15	+1.6
3,805,680	+		IAI47_17925	0.18	+2.0
3,805,680	+		IAI47_17925	0.18	-0.5
3,805,680	+		IAI47_17925	0.18	+0.4
3,805,681	-		IAI47_17925	0.18	+1.7
3,805,681	-		IAI47_17925	0.18	+1.7
3,805,681	-		IAI47_17925	0.18	-0.6
3,805,681	-		IAI47_17925	0.18	+1.8
3,805,681	-		IAI47_17925	0.18	-0.6
3,805,681	-		IAI47_17925	0.18	-0.8
3,805,688	+		IAI47_17925	0.18	+0.0
3,805,688	+		IAI47_17925	0.18	-1.0
3,805,689	-		IAI47_17925	0.18	+1.0
3,805,689	-		IAI47_17925	0.18	-0.7
3,805,706	+		IAI47_17925	0.20	-1.8
3,805,706	+		IAI47_17925	0.20	-1.2
3,805,706	+		IAI47_17925	0.20	-0.8
3,805,706	+		IAI47_17925	0.20	+3.6
3,805,706	+		IAI47_17925	0.20	+0.0
3,805,706	+		IAI47_17925	0.20	+2.1
3,805,706	+		IAI47_17925	0.20	+0.1
3,805,707	-		IAI47_17925	0.20	+3.7
3,805,707	-		IAI47_17925	0.20	-1.0
3,805,707	-		IAI47_17925	0.20	+0.9
3,805,816	+		IAI47_17925	0.30	+0.4
3,805,817	-		IAI47_17925	0.30	+1.8
3,805,817	-		IAI47_17925	0.30	-1.3
3,805,827	+		IAI47_17925	0.31	-0.3
3,805,827	+		IAI47_17925	0.31	-1.0
3,805,871	+		IAI47_17925	0.35	-1.6
3,805,871	+		IAI47_17925	0.35	-1.0
3,805,871	+		IAI47_17925	0.35	-2.2
3,805,872	-		IAI47_17925	0.36	-0.3
3,805,872	-		IAI47_17925	0.36	-1.1
3,805,872	-		IAI47_17925	0.36	+0.6
3,805,880	+		IAI47_17925	0.36	-0.8
3,805,880	+		IAI47_17925	0.36	-0.0
3,805,880	+		IAI47_17925	0.36	-0.8
3,805,881	-		IAI47_17925	0.36	+1.0
3,805,881	-		IAI47_17925	0.36	+0.2
3,805,881	-		IAI47_17925	0.36	-1.8
3,805,896	+		IAI47_17925	0.38	+2.2
3,805,896	+		IAI47_17925	0.38	+1.3
3,805,896	+		IAI47_17925	0.38	+0.8
3,805,896	+		IAI47_17925	0.38	+1.1
3,805,896	+		IAI47_17925	0.38	-0.9
3,805,896	+		IAI47_17925	0.38	-1.0
3,805,897	-		IAI47_17925	0.38	+0.6
3,805,897	-		IAI47_17925	0.38	+2.5
3,805,897	-		IAI47_17925	0.38	+0.3
3,805,897	-		IAI47_17925	0.38	-1.5
3,805,898	+		IAI47_17925	0.38	-0.5
3,805,898	+		IAI47_17925	0.38	-0.7
3,805,898	+		IAI47_17925	0.38	-0.3
3,805,899	-		IAI47_17925	0.38	+2.3
3,805,899	-		IAI47_17925	0.38	+1.9
3,805,899	-		IAI47_17925	0.38	-1.0
3,805,899	-		IAI47_17925	0.38	-0.6
3,805,937	+		IAI47_17925	0.42	+1.7
3,805,937	+		IAI47_17925	0.42	+1.1
3,805,938	-		IAI47_17925	0.42	-1.0
3,805,943	+		IAI47_17925	0.42	+0.4
3,805,943	+		IAI47_17925	0.42	-0.4
3,805,943	+		IAI47_17925	0.42	+0.9
3,805,944	-		IAI47_17925	0.42	-0.7
3,805,944	-		IAI47_17925	0.42	+1.9
3,805,976	+		IAI47_17925	0.45	-0.8
3,805,977	-		IAI47_17925	0.45	-0.2
3,805,977	-		IAI47_17925	0.45	+0.6
3,805,977	-		IAI47_17925	0.45	+0.8
3,805,977	-		IAI47_17925	0.45	+0.7
3,805,981	-		IAI47_17925	0.46	+0.5
3,805,981	-		IAI47_17925	0.46	+1.3
3,805,981	-		IAI47_17925	0.46	-1.6
3,805,981	-		IAI47_17925	0.46	+1.3
3,805,981	-		IAI47_17925	0.46	+2.2
3,805,988	+		IAI47_17925	0.47	+2.3
3,805,988	+				+0.6
3,805,989	-		IAI47_17925	0.47	-1.2
3,805,992	-		IAI47_17925	0.47	-0.0
3,806,046	+		IAI47_17925	0.52	+3.5
3,806,046	+		IAI47_17925	0.52	-2.0
3,806,046	+		IAI47_17925	0.52	+0.8
3,806,046	+		IAI47_17925	0.52	-0.4
3,806,047	-		IAI47_17925	0.52	-2.4
3,806,054	-		IAI47_17925	0.53	-0.5
3,806,179	+		IAI47_17925	0.65	+1.7
3,806,179	+		IAI47_17925	0.65	+0.4
3,806,180	-		IAI47_17925	0.65	-0.9
3,806,180	-		IAI47_17925	0.65	-0.1
3,806,180	-		IAI47_17925	0.65	+0.4
3,806,201	+		IAI47_17925	0.67	-2.1
3,806,201	+		IAI47_17925	0.67	+0.8
3,806,202	-		IAI47_17925	0.67	-1.4
3,806,206	-		IAI47_17925	0.67	+0.3
3,806,206	-		IAI47_17925	0.67	+1.3
3,806,274	+		IAI47_17925	0.73	-2.1