Strain Fitness in Pantoea sp. MT58 around IAI47_15615

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,290,714	-		IAI47_15610	0.64	-2.2
3,290,840	-		IAI47_15610	0.70	-0.8
3,290,840	-		IAI47_15610	0.70	-2.0
3,290,845	+		IAI47_15610	0.70	-0.7
3,291,001	-		IAI47_15610	0.77	+1.0
3,291,044	-		IAI47_15610	0.79	-0.6
3,291,067	+		IAI47_15610	0.80	-0.5
3,291,068	-		IAI47_15610	0.80	+0.0
3,291,068	-		IAI47_15610	0.80	+0.0
3,291,068	-		IAI47_15610	0.80	-2.0
3,291,068	-		IAI47_15610	0.80	-0.2
3,291,068	-		IAI47_15610	0.80	+0.0
3,291,068	-		IAI47_15610	0.80	-1.2
3,291,068	-		IAI47_15610	0.80	+0.6
3,291,068	-		IAI47_15610	0.80	+0.7
3,291,068	-		IAI47_15610	0.80	-0.5
3,291,068	-		IAI47_15610	0.80	+1.6
3,291,098	+		IAI47_15610	0.81	-0.8
3,291,098	+		IAI47_15610	0.81	-0.8
3,291,099	-		IAI47_15610	0.81	-0.2
3,291,099	-		IAI47_15610	0.81	-0.1
3,291,099	-		IAI47_15610	0.81	-2.2
3,291,099	-		IAI47_15610	0.81	-0.1
3,291,099	-		IAI47_15610	0.81	-1.7
3,291,100	+		IAI47_15610	0.81	+1.0
3,291,100	+		IAI47_15610	0.81	+0.0
3,291,101	-		IAI47_15610	0.81	-0.4
3,291,101	-		IAI47_15610	0.81	+1.2
3,291,101	-		IAI47_15610	0.81	-0.1
3,291,101	-		IAI47_15610	0.81	-0.1
3,291,101	-		IAI47_15610	0.81	-1.3
3,291,101	-		IAI47_15610	0.81	+3.5
3,291,101	-		IAI47_15610	0.81	-1.4
3,291,110	+		IAI47_15610	0.82	+0.3
3,291,111	-		IAI47_15610	0.82	+2.6
3,291,113	+		IAI47_15610	0.82	-0.7
3,291,180	+		IAI47_15610	0.85	-0.5
3,291,191	+		IAI47_15610	0.86	+0.6
3,291,192	-		IAI47_15610	0.86	-0.0
3,291,192	-		IAI47_15610	0.86	-1.8
3,291,192	-		IAI47_15610	0.86	+0.0
3,291,192	-		IAI47_15610	0.86	-1.3
3,291,192	-		IAI47_15610	0.86	-1.0
3,291,193	+		IAI47_15610	0.86	+0.3
3,291,194	-		IAI47_15610	0.86	-0.8
3,291,194	-		IAI47_15610	0.86	-0.7
3,291,194	-		IAI47_15610	0.86	+0.2
3,291,198	-		IAI47_15610	0.86	+1.9
3,291,198	-		IAI47_15610	0.86	+0.6
3,291,198	-		IAI47_15610	0.86	+2.6
3,291,198	-		IAI47_15610	0.86	-1.8
3,291,198	-		IAI47_15610	0.86	-1.2
3,291,198	-		IAI47_15610	0.86	+0.8
3,291,198	-		IAI47_15610	0.86	+0.6
3,291,198	-		IAI47_15610	0.86	-0.7
3,291,198	-		IAI47_15610	0.86	-1.3
3,291,509	+				-0.0
3,291,510	-				+0.6
3,291,510	-				-0.9
3,291,510	-				+1.0
3,291,510	-				+0.7
3,291,510	-				+1.4
3,291,651	+				+0.5
3,291,652	-				-2.5
3,291,652	-				-0.4
3,291,652	-				+0.1
3,291,654	+				-0.8
3,291,654	+				-0.1
3,291,654	+				+1.8
3,291,654	+				+0.4
3,291,689	+				+1.2
3,291,689	+				+0.6
3,291,689	+				+0.6
3,291,689	+				-0.5
3,291,689	+				-2.0
3,291,689	+				-0.3
3,291,690	-				+1.4
3,291,690	-				+1.5
3,291,690	-				+0.7
3,291,690	-				+2.0
3,291,691	+				-1.8
3,291,692	-				+2.0
3,291,692	-				-1.3
3,291,692	-				+0.3
3,291,711	-				+0.8
3,291,711	-				+1.9
3,291,723	+				-1.3
3,291,723	+				-0.1
3,291,723	+				-1.7
3,291,723	+				-1.5
3,291,723	+				+1.6
3,291,723	+				+0.4
3,291,723	+				+1.4
3,291,723	+				+1.4
3,291,723	+				-2.8
3,291,724	-				-0.8
3,291,724	-				+0.6
3,291,724	-				+0.8
3,291,724	-				-2.4
3,291,742	+				-0.6
3,291,742	+				-0.4
3,291,743	-				+3.6
3,291,743	-				-0.1
3,291,743	-				+2.3
3,292,013	+		IAI47_15615	0.12	-0.9
3,292,023	-		IAI47_15615	0.12	-0.1
3,292,049	+		IAI47_15615	0.13	-0.4
3,292,049	+		IAI47_15615	0.13	+0.9
3,292,049	+		IAI47_15615	0.13	-2.1
3,292,049	+		IAI47_15615	0.13	-0.5
3,292,235	+		IAI47_15615	0.21	+1.0
3,292,235	+		IAI47_15615	0.21	+0.5
3,292,236	-		IAI47_15615	0.21	+0.9
3,292,236	-		IAI47_15615	0.21	-0.2
3,292,236	-		IAI47_15615	0.21	+0.8
3,292,236	-		IAI47_15615	0.21	-2.5
3,292,236	-		IAI47_15615	0.21	-0.9
3,292,236	-		IAI47_15615	0.21	+0.6
3,292,247	+		IAI47_15615	0.21	+1.1
3,292,247	+		IAI47_15615	0.21	+0.0
3,292,248	-		IAI47_15615	0.21	+3.7
3,292,248	-		IAI47_15615	0.21	+0.0
3,292,248	-		IAI47_15615	0.21	-2.6
3,292,286	+		IAI47_15615	0.23	-0.4
3,292,296	-		IAI47_15615	0.23	+1.0
3,292,296	-		IAI47_15615	0.23	+0.9
3,292,296	-		IAI47_15615	0.23	-0.7
3,292,305	+		IAI47_15615	0.24	-0.1
3,292,305	+		IAI47_15615	0.24	+1.0
3,292,305	+		IAI47_15615	0.24	-0.6
3,292,305	+		IAI47_15615	0.24	-1.0
3,292,305	+		IAI47_15615	0.24	-2.7
3,292,306	-		IAI47_15615	0.24	+0.1
3,292,330	+		IAI47_15615	0.25	-0.1
3,292,330	+		IAI47_15615	0.25	+0.1
3,292,330	+		IAI47_15615	0.25	+0.1
3,292,331	-		IAI47_15615	0.25	-0.3
3,292,331	-		IAI47_15615	0.25	+0.4
3,292,476	+		IAI47_15615	0.30	-0.6
3,292,476	+		IAI47_15615	0.30	-0.5
3,292,476	+		IAI47_15615	0.30	-0.1
3,292,506	+		IAI47_15615	0.31	-0.9
3,292,506	+		IAI47_15615	0.31	-1.9
3,292,507	-		IAI47_15615	0.32	+0.2
3,292,507	-		IAI47_15615	0.32	-2.3
3,292,665	-		IAI47_15615	0.38	-0.2
3,292,665	-		IAI47_15615	0.38	-0.6
3,292,694	+		IAI47_15615	0.39	-0.3
3,292,694	+		IAI47_15615	0.39	-1.7
3,292,694	+		IAI47_15615	0.39	-1.3
3,292,695	-		IAI47_15615	0.39	+0.6
3,292,695	-		IAI47_15615	0.39	+0.7
3,292,695	-		IAI47_15615	0.39	+2.0
3,292,695	-		IAI47_15615	0.39	-2.3
3,292,695	-		IAI47_15615	0.39	+1.3
3,292,695	-		IAI47_15615	0.39	-0.7
3,292,722	+		IAI47_15615	0.40	-0.5
3,292,722	+		IAI47_15615	0.40	-0.7
3,292,722	+		IAI47_15615	0.40	-0.4
3,292,723	-		IAI47_15615	0.40	+0.2
3,292,761	-		IAI47_15615	0.42	-1.2
3,292,803	+		IAI47_15615	0.43	-1.7
3,292,803	+		IAI47_15615	0.43	-1.2
3,292,872	+		IAI47_15615	0.46	-0.9
3,292,873	-		IAI47_15615	0.46	-1.3
3,292,923	+		IAI47_15615	0.48	-0.4
3,292,923	+		IAI47_15615	0.48	+0.8
3,292,923	+		IAI47_15615	0.48	-2.2
3,292,923	+		IAI47_15615	0.48	+0.4
3,292,924	-		IAI47_15615	0.48	+1.3
3,292,953	+		IAI47_15615	0.49	-1.2
3,292,953	+		IAI47_15615	0.49	+0.0
3,292,953	+		IAI47_15615	0.49	-0.5
3,292,953	+		IAI47_15615	0.49	+0.9
3,292,954	-		IAI47_15615	0.49	-2.1
3,292,954	-		IAI47_15615	0.49	+0.2
3,292,986	+		IAI47_15615	0.50	-0.7
3,293,001	+		IAI47_15615	0.51	-0.2
3,293,001	+		IAI47_15615	0.51	-1.1
3,293,001	+		IAI47_15615	0.51	-1.1
3,293,002	-		IAI47_15615	0.51	-1.3
3,293,072	+		IAI47_15615	0.54	-0.1
3,293,072	+		IAI47_15615	0.54	-0.4
3,293,072	+		IAI47_15615	0.54	-0.3
3,293,072	+		IAI47_15615	0.54	-1.2
3,293,072	+		IAI47_15615	0.54	-0.6
3,293,072	+		IAI47_15615	0.54	-0.1
3,293,073	-		IAI47_15615	0.54	+0.8
3,293,073	-		IAI47_15615	0.54	+0.7
3,293,073	-		IAI47_15615	0.54	-0.6
3,293,163	+		IAI47_15615	0.57	-0.3
3,293,163	+		IAI47_15615	0.57	+0.3
3,293,163	+		IAI47_15615	0.57	+0.0
3,293,164	-		IAI47_15615	0.57	+1.2
3,293,165	+		IAI47_15615	0.58	-1.1
3,293,165	+		IAI47_15615	0.58	+0.0
3,293,165	+		IAI47_15615	0.58	-1.5
3,293,165	+		IAI47_15615	0.58	-1.1
3,293,165	+		IAI47_15615	0.58	-0.8
3,293,166	-		IAI47_15615	0.58	-0.5
3,293,166	-		IAI47_15615	0.58	+0.1
3,293,166	-		IAI47_15615	0.58	-0.5
3,293,166	-		IAI47_15615	0.58	+0.4
3,293,166	-		IAI47_15615	0.58	-1.5
3,293,166	-		IAI47_15615	0.58	-0.4
3,293,243	+		IAI47_15615	0.61	+0.8
3,293,243	+		IAI47_15615	0.61	-1.8
3,293,243	+		IAI47_15615	0.61	-0.5
3,293,244	-		IAI47_15615	0.61	-0.3
3,293,244	-		IAI47_15615	0.61	+0.3
3,293,244	-		IAI47_15615	0.61	-0.5
3,293,246	+		IAI47_15615	0.61	-0.9
3,293,246	+		IAI47_15615	0.61	+0.4
3,293,246	+		IAI47_15615	0.61	-2.0
3,293,246	+		IAI47_15615	0.61	+2.6
3,293,246	+		IAI47_15615	0.61	+1.0
3,293,247	-		IAI47_15615	0.61	+0.1
3,293,247	-		IAI47_15615	0.61	+1.1
3,293,300	+		IAI47_15615	0.63	+0.6
3,293,300	+		IAI47_15615	0.63	+0.8
3,293,300	+		IAI47_15615	0.63	+0.0
3,293,301	-		IAI47_15615	0.63	+0.0
3,293,301	-		IAI47_15615	0.63	-1.9
3,293,301	-		IAI47_15615	0.63	+0.5
3,293,315	+		IAI47_15615	0.63	+0.3
3,293,315	+		IAI47_15615	0.63	-0.8
3,293,315	+		IAI47_15615	0.63	-0.0
3,293,315	+		IAI47_15615	0.63	+0.1
3,293,315	+		IAI47_15615	0.63	-0.8
3,293,315	+		IAI47_15615	0.63	+0.2
3,293,315	+		IAI47_15615	0.63	-2.1
3,293,316	-		IAI47_15615	0.63	-1.3
3,293,316	-		IAI47_15615	0.63	+0.7
3,293,367	+		IAI47_15615	0.65	+1.1
3,293,368	-		IAI47_15615	0.66	+0.9
3,293,368	-		IAI47_15615	0.66	-1.1
3,293,369	+		IAI47_15615	0.66	+0.0
3,293,369	+		IAI47_15615	0.66	-1.5
3,293,369	+		IAI47_15615	0.66	-0.6
3,293,369	+		IAI47_15615	0.66	-0.1
3,293,369	+		IAI47_15615	0.66	-0.1
3,293,369	+		IAI47_15615	0.66	+1.2
3,293,369	+		IAI47_15615	0.66	-0.2
3,293,369	+		IAI47_15615	0.66	+1.3
3,293,369	+		IAI47_15615	0.66	-0.9
3,293,370	-		IAI47_15615	0.66	-1.1
3,293,370	-		IAI47_15615	0.66	+0.1
3,293,370	-		IAI47_15615	0.66	+0.8
3,293,370	-		IAI47_15615	0.66	+1.3
3,293,370	-		IAI47_15615	0.66	+0.1
3,293,370	-		IAI47_15615	0.66	+0.6
3,293,370	-		IAI47_15615	0.66	+0.6
3,293,370	-		IAI47_15615	0.66	-2.1
3,293,385	+		IAI47_15615	0.66	+0.3
3,293,385	+		IAI47_15615	0.66	-1.3
3,293,385	+		IAI47_15615	0.66	-0.7
3,293,386	-		IAI47_15615	0.66	-0.2
3,293,445	+		IAI47_15615	0.69	-0.3
3,293,446	-		IAI47_15615	0.69	-1.0
3,293,507	+		IAI47_15615	0.71	+1.5
3,293,507	+		IAI47_15615	0.71	-0.3
3,293,531	+		IAI47_15615	0.72	+0.5
3,293,531	+		IAI47_15615	0.72	-0.0
3,293,531	+		IAI47_15615	0.72	-0.0
3,293,532	-		IAI47_15615	0.72	-2.7
3,293,534	-		IAI47_15615	0.72	+1.4
3,293,562	+		IAI47_15615	0.73	+1.2
3,293,562	+		IAI47_15615	0.73	-0.8
3,293,563	-		IAI47_15615	0.73	-1.8
3,293,751	+		IAI47_15615	0.81	+0.1
3,293,752	-		IAI47_15615	0.81	+0.7
3,293,846	+		IAI47_15615	0.84	+0.2
3,293,924	+		IAI47_15615	0.87	-0.0
3,293,924	+		IAI47_15615	0.87	-1.2
3,293,925	-		IAI47_15615	0.88	-0.1
3,293,925	-		IAI47_15615	0.88	-0.6
3,293,952	+		IAI47_15615	0.89	+1.6
3,293,953	-		IAI47_15615	0.89	+0.6
3,293,953	-		IAI47_15615	0.89	+1.0
3,293,961	+		IAI47_15615	0.89	-0.0
3,293,961	+		IAI47_15615	0.89	-0.9
3,293,962	-		IAI47_15615	0.89	+0.6
3,293,987	+				-1.8
3,293,987	+				+0.2
3,293,987	+				+0.2
3,293,987	+				-1.1
3,294,033	+				+0.8
3,294,033	+				+0.3
3,294,034	-				-0.2
3,294,034	-				+1.9
3,294,034	-				-1.4
3,294,034	-				-1.2
3,294,037	+				-0.1
3,294,037	+				+0.3
3,294,037	+				-0.7
3,294,038	-				-0.3
3,294,038	-				+0.8
3,294,084	+				-0.2
3,294,085	-				+0.6
3,294,085	-				+1.5
3,294,085	-				-0.4
3,294,085	-				-1.6
3,294,090	+				+1.9
3,294,091	-				-0.0
3,294,141	+				-1.2
3,294,153	+				-1.9
3,294,201	+				-0.2
3,294,201	+				+1.3
3,294,202	-				-0.2
3,294,202	-				+0.3
3,294,215	-				-0.4
3,294,279	+				-0.4
3,294,279	+				+0.1
3,294,279	+				+0.9
3,294,279	+				+2.2
3,294,280	-				+1.1
3,294,284	+				+1.8
3,294,284	+				+1.3
3,294,285	-				+0.1
3,294,285	-				-1.3
3,294,413	+				-1.5
3,294,413	+				+0.3
3,294,413	+				+1.0
3,294,414	-				-1.3
3,294,414	-				-1.6
3,294,414	-				+1.5
3,294,414	-				+0.3
3,294,536	+				+0.6
3,294,537	-				-0.9
3,294,537	-				+0.7
3,294,537	-				-1.2
3,294,537	-				+1.5
3,294,658	+		IAI47_15620	0.13	-1.2
3,294,658	+		IAI47_15620	0.13	+0.0
3,294,658	+		IAI47_15620	0.13	+0.7
3,294,658	+		IAI47_15620	0.13	-0.4
3,294,658	+		IAI47_15620	0.13	-2.5
3,294,658	+		IAI47_15620	0.13	-1.3
3,294,659	-		IAI47_15620	0.13	+0.3
3,294,659	-		IAI47_15620	0.13	+1.3
3,294,659	-		IAI47_15620	0.13	+0.4
3,294,659	-		IAI47_15620	0.13	-1.7
3,294,659	-		IAI47_15620	0.13	+0.5
3,294,659	-		IAI47_15620	0.13	+1.5
3,294,659	-		IAI47_15620	0.13	-2.1
3,294,677	+		IAI47_15620	0.14	-0.5
3,294,677	+		IAI47_15620	0.14	-2.5
3,294,677	+		IAI47_15620	0.14	+1.5
3,294,708	+		IAI47_15620	0.15	-2.9
3,294,708	+		IAI47_15620	0.15	-1.2
3,294,708	+		IAI47_15620	0.15	-2.0
3,294,709	-		IAI47_15620	0.15	-1.9
3,294,709	-		IAI47_15620	0.15	+0.6
3,294,709	-		IAI47_15620	0.15	-0.7
3,294,709	-		IAI47_15620	0.15	+2.1
3,294,803	+		IAI47_15620	0.19	-1.5
3,294,803	+		IAI47_15620	0.19	+0.8
3,294,803	+		IAI47_15620	0.19	-1.2
3,294,803	+		IAI47_15620	0.19	-0.4
3,294,804	-		IAI47_15620	0.19	+1.0
3,294,804	-		IAI47_15620	0.19	+1.6
3,294,804	-		IAI47_15620	0.19	+1.2
3,294,804	-		IAI47_15620	0.19	+0.3
3,294,804	-		IAI47_15620	0.19	-0.2
3,294,994	+		IAI47_15620	0.26	+0.1
3,295,154	+		IAI47_15620	0.33	+0.7
3,295,164	+		IAI47_15620	0.33	+0.2
3,295,164	+		IAI47_15620	0.33	-1.0
3,295,167	+		IAI47_15620	0.33	-1.9
3,295,168	-		IAI47_15620	0.33	+0.0
3,295,168	-		IAI47_15620	0.33	-0.3