Strain Fitness in Pantoea sp. MT58 around IAI47_13455

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,855,162	+		IAI47_13450	0.22	-0.6
2,855,162	+		IAI47_13450	0.22	-0.2
2,855,173	+		IAI47_13450	0.22	-0.9
2,855,173	+		IAI47_13450	0.22	-0.1
2,855,173	+		IAI47_13450	0.22	-0.4
2,855,173	+		IAI47_13450	0.22	+3.8
2,855,176	+		IAI47_13450	0.23	+0.3
2,855,176	+		IAI47_13450	0.23	+0.2
2,855,176	+		IAI47_13450	0.23	+1.2
2,855,177	-		IAI47_13450	0.23	+0.8
2,855,177	-		IAI47_13450	0.23	+4.4
2,855,216	+		IAI47_13450	0.26	-0.5
2,855,216	+		IAI47_13450	0.26	+1.3
2,855,216	+		IAI47_13450	0.26	-0.1
2,855,217	-		IAI47_13450	0.26	+0.1
2,855,217	-		IAI47_13450	0.26	+1.7
2,855,333	-		IAI47_13450	0.35	+1.9
2,855,333	-		IAI47_13450	0.35	-0.2
2,855,334	+		IAI47_13450	0.35	+0.3
2,855,377	+		IAI47_13450	0.39	+0.4
2,855,378	-		IAI47_13450	0.39	-0.9
2,855,378	-		IAI47_13450	0.39	+0.6
2,855,378	-		IAI47_13450	0.39	-0.4
2,855,409	+		IAI47_13450	0.41	-1.6
2,855,409	+		IAI47_13450	0.41	+1.7
2,855,457	+		IAI47_13450	0.45	-1.1
2,855,458	-		IAI47_13450	0.45	+0.3
2,855,458	-		IAI47_13450	0.45	+0.1
2,855,458	-		IAI47_13450	0.45	-0.9
2,855,458	-		IAI47_13450	0.45	-0.2
2,855,482	+		IAI47_13450	0.47	+0.8
2,855,482	+		IAI47_13450	0.47	-1.3
2,855,482	+		IAI47_13450	0.47	+0.1
2,855,482	+		IAI47_13450	0.47	-0.5
2,855,482	+		IAI47_13450	0.47	+1.4
2,855,482	+		IAI47_13450	0.47	+0.4
2,855,482	+		IAI47_13450	0.47	+0.5
2,855,482	+		IAI47_13450	0.47	+0.1
2,855,482	+		IAI47_13450	0.47	+0.7
2,855,482	+		IAI47_13450	0.47	+1.7
2,855,482	+		IAI47_13450	0.47	+0.8
2,855,482	+		IAI47_13450	0.47	-0.1
2,855,482	+		IAI47_13450	0.47	-0.7
2,855,482	+		IAI47_13450	0.47	+0.7
2,855,482	+		IAI47_13450	0.47	+0.7
2,855,482	+		IAI47_13450	0.47	+1.4
2,855,482	+		IAI47_13450	0.47	+2.6
2,855,483	-		IAI47_13450	0.47	+2.4
2,855,483	-		IAI47_13450	0.47	+1.1
2,855,483	-		IAI47_13450	0.47	+0.9
2,855,483	-		IAI47_13450	0.47	-0.7
2,855,483	-		IAI47_13450	0.47	-0.5
2,855,483	-		IAI47_13450	0.47	+0.5
2,855,483	-		IAI47_13450	0.47	+0.4
2,855,483	-		IAI47_13450	0.47	+1.1
2,855,483	-		IAI47_13450	0.47	+1.5
2,855,483	-		IAI47_13450	0.47	+1.4
2,855,483	-		IAI47_13450	0.47	-1.2
2,855,483	-		IAI47_13450	0.47	+0.2
2,855,483	-		IAI47_13450	0.47	+0.6
2,855,483	-		IAI47_13450	0.47	-2.0
2,855,488	+		IAI47_13450	0.48	+0.5
2,855,530	+		IAI47_13450	0.51	+1.0
2,855,530	+		IAI47_13450	0.51	-0.6
2,855,530	+		IAI47_13450	0.51	+0.7
2,855,531	-		IAI47_13450	0.51	+0.6
2,855,531	-		IAI47_13450	0.51	+0.3
2,855,568	+		IAI47_13450	0.54	+0.5
2,855,569	-		IAI47_13450	0.54	+0.4
2,855,569	-		IAI47_13450	0.54	-2.1
2,855,569	-		IAI47_13450	0.54	+0.4
2,855,581	+		IAI47_13450	0.55	+0.1
2,855,581	+		IAI47_13450	0.55	+0.6
2,855,582	-		IAI47_13450	0.55	+1.0
2,855,582	-		IAI47_13450	0.55	-0.2
2,855,619	+		IAI47_13450	0.58	-1.4
2,855,620	-		IAI47_13450	0.58	-2.5
2,855,620	-		IAI47_13450	0.58	-0.8
2,855,620	-		IAI47_13450	0.58	-1.2
2,855,674	-		IAI47_13450	0.63	+0.6
2,855,681	+		IAI47_13450	0.63	-0.3
2,855,684	+		IAI47_13450	0.63	-0.8
2,855,684	+		IAI47_13450	0.63	-0.4
2,855,684	+		IAI47_13450	0.63	+0.1
2,855,684	+		IAI47_13450	0.63	+0.5
2,855,707	+		IAI47_13450	0.65	+1.5
2,855,707	+		IAI47_13450	0.65	-1.1
2,855,707	+		IAI47_13450	0.65	-0.6
2,855,707	+		IAI47_13450	0.65	+3.6
2,855,708	-		IAI47_13450	0.65	-0.9
2,855,708	-		IAI47_13450	0.65	-1.7
2,855,708	-		IAI47_13450	0.65	-1.7
2,855,708	-		IAI47_13450	0.65	-0.3
2,855,708	-		IAI47_13450	0.65	-1.7
2,855,708	-		IAI47_13450	0.65	-2.2
2,855,708	-		IAI47_13450	0.65	+0.1
2,855,708	-		IAI47_13450	0.65	-0.6
2,855,709	+		IAI47_13450	0.65	+0.5
2,855,709	+		IAI47_13450	0.65	+1.4
2,855,709	+		IAI47_13450	0.65	-1.5
2,855,709	+		IAI47_13450	0.65	-1.5
2,855,709	+		IAI47_13450	0.65	-0.5
2,855,709	+		IAI47_13450	0.65	+0.4
2,855,709	+		IAI47_13450	0.65	-1.2
2,855,709	+		IAI47_13450	0.65	+1.1
2,855,709	+		IAI47_13450	0.65	-0.4
2,855,709	+		IAI47_13450	0.65	+1.2
2,855,710	-		IAI47_13450	0.66	+0.8
2,855,710	-		IAI47_13450	0.66	-0.0
2,855,710	-		IAI47_13450	0.66	+0.9
2,855,710	-		IAI47_13450	0.66	-0.6
2,855,710	-		IAI47_13450	0.66	+0.8
2,855,710	-		IAI47_13450	0.66	+1.4
2,855,710	-		IAI47_13450	0.66	-0.2
2,855,710	-		IAI47_13450	0.66	-1.6
2,855,713	+		IAI47_13450	0.66	+0.5
2,855,713	+		IAI47_13450	0.66	+2.0
2,855,713	+		IAI47_13450	0.66	-1.6
2,855,713	+		IAI47_13450	0.66	-0.9
2,855,714	-		IAI47_13450	0.66	-0.9
2,855,714	-		IAI47_13450	0.66	+2.7
2,855,714	-		IAI47_13450	0.66	-0.5
2,855,714	-		IAI47_13450	0.66	-1.0
2,855,714	-		IAI47_13450	0.66	-1.0
2,855,740	+		IAI47_13450	0.68	+0.2
2,855,740	+		IAI47_13450	0.68	-0.6
2,855,740	+		IAI47_13450	0.68	-1.1
2,855,740	+		IAI47_13450	0.68	+0.3
2,855,740	+		IAI47_13450	0.68	+0.4
2,855,740	+		IAI47_13450	0.68	+0.2
2,855,741	-		IAI47_13450	0.68	-1.0
2,855,741	-		IAI47_13450	0.68	-1.1
2,855,741	-		IAI47_13450	0.68	-0.6
2,855,746	+		IAI47_13450	0.68	+1.7
2,855,746	+		IAI47_13450	0.68	+0.2
2,855,746	+		IAI47_13450	0.68	+0.1
2,855,746	+		IAI47_13450	0.68	-0.3
2,855,746	+		IAI47_13450	0.68	+1.1
2,855,746	+		IAI47_13450	0.68	+3.7
2,855,747	-		IAI47_13450	0.69	+0.2
2,855,747	-		IAI47_13450	0.69	-2.2
2,855,747	-		IAI47_13450	0.69	-0.2
2,855,747	-		IAI47_13450	0.69	+2.4
2,855,747	-		IAI47_13450	0.69	-0.3
2,855,748	+		IAI47_13450	0.69	-1.2
2,855,748	+		IAI47_13450	0.69	-1.3
2,855,748	+		IAI47_13450	0.69	+0.4
2,855,748	+		IAI47_13450	0.69	+1.7
2,855,748	+		IAI47_13450	0.69	-0.4
2,855,748	+		IAI47_13450	0.69	-0.4
2,855,748	+		IAI47_13450	0.69	-1.2
2,855,749	-		IAI47_13450	0.69	+0.5
2,855,749	-		IAI47_13450	0.69	-0.6
2,855,749	-		IAI47_13450	0.69	-0.1
2,855,780	+		IAI47_13450	0.71	-2.1
2,855,781	-		IAI47_13450	0.71	-0.3
2,855,841	-		IAI47_13450	0.76	+0.7
2,855,880	+		IAI47_13450	0.79	+0.2
2,855,881	-		IAI47_13450	0.79	-0.3
2,855,979	+		IAI47_13450	0.87	+0.5
2,855,980	-		IAI47_13450	0.87	-0.1
2,856,045	+				-1.5
2,856,045	+				-0.6
2,856,046	-				-0.2
2,856,077	+				-1.5
2,856,078	-				+0.1
2,856,078	-				+0.9
2,856,187	+				+0.3
2,856,188	-				+0.9
2,856,225	+				+2.4
2,856,226	-				+1.2
2,856,226	-				-0.1
2,856,226	-				+0.5
2,856,255	+		IAI47_13455	0.12	+1.7
2,856,255	+		IAI47_13455	0.12	+1.4
2,856,255	+		IAI47_13455	0.12	+0.5
2,856,255	+		IAI47_13455	0.12	+0.1
2,856,255	+		IAI47_13455	0.12	+2.3
2,856,256	-		IAI47_13455	0.12	+3.4
2,856,256	-		IAI47_13455	0.12	+0.9
2,856,256	-		IAI47_13455	0.12	-1.4
2,856,256	-		IAI47_13455	0.12	-0.6
2,856,256	-		IAI47_13455	0.12	+0.4
2,856,256	-		IAI47_13455	0.12	+0.4
2,856,256	-		IAI47_13455	0.12	-1.1
2,856,256	-		IAI47_13455	0.12	-0.2
2,856,257	+		IAI47_13455	0.12	+0.7
2,856,257	+		IAI47_13455	0.12	-0.1
2,856,257	+		IAI47_13455	0.12	-0.6
2,856,257	+		IAI47_13455	0.12	-2.8
2,856,257	+		IAI47_13455	0.12	+1.4
2,856,258	-		IAI47_13455	0.12	-1.0
2,856,258	-		IAI47_13455	0.12	+2.2
2,856,258	-		IAI47_13455	0.12	-2.0
2,856,269	+		IAI47_13455	0.14	+0.5
2,856,273	+		IAI47_13455	0.14	+1.1
2,856,273	+		IAI47_13455	0.14	+1.2
2,856,273	+		IAI47_13455	0.14	-1.5
2,856,274	-		IAI47_13455	0.14	-0.9
2,856,274	-		IAI47_13455	0.14	+0.6
2,856,322	-		IAI47_13455	0.19	+1.0
2,856,330	+		IAI47_13455	0.20	+0.1
2,856,330	+		IAI47_13455	0.20	-0.5
2,856,330	+		IAI47_13455	0.20	-1.8
2,856,330	+		IAI47_13455	0.20	-0.5
2,856,331	-		IAI47_13455	0.20	+0.0
2,856,331	-		IAI47_13455	0.20	+0.2
2,856,339	+		IAI47_13455	0.21	-0.1
2,856,339	+		IAI47_13455	0.21	+1.8
2,856,339	+		IAI47_13455	0.21	-0.4
2,856,339	+		IAI47_13455	0.21	-2.3
2,856,339	+		IAI47_13455	0.21	-0.2
2,856,340	-		IAI47_13455	0.21	-1.1
2,856,340	-		IAI47_13455	0.21	+4.2
2,856,340	-		IAI47_13455	0.21	+1.8
2,856,407	+		IAI47_13455	0.28	+0.2
2,856,408	-		IAI47_13455	0.28	+1.4
2,856,408	-		IAI47_13455	0.28	+0.4
2,856,408	-		IAI47_13455	0.28	-1.0
2,856,408	-		IAI47_13455	0.28	-1.5
2,856,414	+		IAI47_13455	0.28	+0.8
2,856,415	-		IAI47_13455	0.29	-0.7
2,856,415	-		IAI47_13455	0.29	-0.3
2,856,423	-		IAI47_13455	0.29	+0.3
2,856,423	-		IAI47_13455	0.29	-0.7
2,856,474	+		IAI47_13455	0.35	+1.1
2,856,475	-		IAI47_13455	0.35	+0.6
2,856,549	+		IAI47_13455	0.42	+1.6
2,856,549	+		IAI47_13455	0.42	+0.2
2,856,549	+		IAI47_13455	0.42	+0.8
2,856,549	+		IAI47_13455	0.42	+1.7
2,856,550	-		IAI47_13455	0.43	-1.5
2,856,550	-		IAI47_13455	0.43	+1.3
2,856,551	+		IAI47_13455	0.43	-2.9
2,856,551	+		IAI47_13455	0.43	+0.8
2,856,551	+		IAI47_13455	0.43	-0.5
2,856,551	+		IAI47_13455	0.43	+2.5
2,856,552	-		IAI47_13455	0.43	-1.5
2,856,552	-		IAI47_13455	0.43	-0.5
2,856,611	+		IAI47_13455	0.49	+0.3
2,856,670	-		IAI47_13455	0.55	+0.8
2,856,670	-		IAI47_13455	0.55	+3.3
2,856,803	+		IAI47_13455	0.69	-1.9
2,856,803	+		IAI47_13455	0.69	-0.8
2,856,804	-		IAI47_13455	0.69	+0.7
2,856,869	+		IAI47_13455	0.75	+1.1
2,856,870	-		IAI47_13455	0.76	+0.3
2,856,870	-		IAI47_13455	0.76	-0.8
2,856,880	+		IAI47_13455	0.77	+0.7
2,856,880	+		IAI47_13455	0.77	-0.4
2,856,881	-		IAI47_13455	0.77	+0.0
2,856,988	-		IAI47_13455	0.88	-0.5
2,856,999	+		IAI47_13455	0.89	+0.3
2,856,999	+		IAI47_13455	0.89	+0.3
2,856,999	+		IAI47_13455	0.89	+0.3
2,856,999	+		IAI47_13455	0.89	-0.2
2,857,000	-		IAI47_13455	0.89	-1.0
2,857,000	-		IAI47_13455	0.89	-0.2
2,857,004	+		IAI47_13455	0.89	+3.2
2,857,004	+		IAI47_13455	0.89	-0.6
2,857,021	+				+0.1
2,857,022	-				+0.6
2,857,035	+				+0.2
2,857,036	-				+1.4
2,857,036	-				+2.7
2,857,142	+				+1.2
2,857,142	+				-1.7
2,857,211	+				-0.5
2,857,212	-				+0.3
2,857,239	-		IAI47_13460	0.12	-0.1
2,857,239	-		IAI47_13460	0.12	+0.8
2,857,307	+		IAI47_13460	0.22	-0.8
2,857,308	-		IAI47_13460	0.22	+0.7
2,857,341	+		IAI47_13460	0.27	+1.4
2,857,343	+		IAI47_13460	0.27	+0.7
2,857,343	+		IAI47_13460	0.27	-1.9
2,857,343	+		IAI47_13460	0.27	-1.9
2,857,343	+		IAI47_13460	0.27	-0.6
2,857,343	+		IAI47_13460	0.27	-0.5
2,857,343	+		IAI47_13460	0.27	-2.2
2,857,344	-		IAI47_13460	0.27	-1.0
2,857,344	-		IAI47_13460	0.27	+0.0
2,857,344	-		IAI47_13460	0.27	-0.7
2,857,344	-		IAI47_13460	0.27	-0.1
2,857,344	-		IAI47_13460	0.27	+0.1
2,857,347	+		IAI47_13460	0.27	-0.1
2,857,347	+		IAI47_13460	0.27	-1.7
2,857,347	+		IAI47_13460	0.27	+1.6
2,857,347	+		IAI47_13460	0.27	+0.4
2,857,347	+		IAI47_13460	0.27	-1.1
2,857,348	-		IAI47_13460	0.28	+1.0
2,857,466	+		IAI47_13460	0.44	-0.3
2,857,467	-		IAI47_13460	0.44	-0.3
2,857,467	-		IAI47_13460	0.44	-2.6
2,857,467	-		IAI47_13460	0.44	+1.3
2,857,472	+		IAI47_13460	0.45	+0.4
2,857,472	+		IAI47_13460	0.45	+0.1
2,857,472	+		IAI47_13460	0.45	-0.3
2,857,473	-		IAI47_13460	0.45	+1.8
2,857,473	-		IAI47_13460	0.45	-1.3
2,857,473	-		IAI47_13460	0.45	-0.0
2,857,473	-		IAI47_13460	0.45	-0.1
2,857,473	-		IAI47_13460	0.45	+1.5
2,857,532	+		IAI47_13460	0.54	+0.3
2,857,532	+		IAI47_13460	0.54	-1.5
2,857,532	+		IAI47_13460	0.54	+0.7
2,857,532	+		IAI47_13460	0.54	-0.0
2,857,532	+		IAI47_13460	0.54	+1.0
2,857,532	+		IAI47_13460	0.54	+0.5
2,857,533	-		IAI47_13460	0.54	-0.5
2,857,533	-		IAI47_13460	0.54	+1.3
2,857,533	-		IAI47_13460	0.54	-0.2
2,857,533	-		IAI47_13460	0.54	-0.7
2,857,533	-		IAI47_13460	0.54	-0.4
2,857,533	-		IAI47_13460	0.54	-0.7
2,857,538	+		IAI47_13460	0.54	+2.1
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2,857,591	-		IAI47_13460	0.62	+0.9
2,857,736	+		IAI47_13460	0.82	+1.3
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2,857,760	-		IAI47_13460	0.86	-0.5
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