Strain Fitness in Pantoea sp. MT58 around IAI47_13435

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,850,982	+				-1.2
2,850,983	-				-1.0
2,850,983	-				-1.0
2,850,983	-				+2.2
2,850,983	-				-0.1
2,850,983	-				+0.1
2,850,984	+				+0.8
2,850,984	+				+0.5
2,850,984	+				+0.2
2,850,985	-				-2.3
2,850,985	-				-1.6
2,850,985	-				+0.4
2,850,985	-				-0.6
2,850,985	-				+0.3
2,850,985	-				-1.1
2,851,033	-				+0.7
2,851,065	-				-0.5
2,851,065	-				+0.6
2,851,101	+				-0.7
2,851,102	-				-0.3
2,851,102	-				-0.9
2,851,121	-		IAI47_13430	0.11	+0.8
2,851,121	-		IAI47_13430	0.11	+0.2
2,851,121	-		IAI47_13430	0.11	+2.7
2,851,168	+		IAI47_13430	0.16	-1.4
2,851,168	+		IAI47_13430	0.16	-1.1
2,851,168	+		IAI47_13430	0.16	-1.7
2,851,169	-		IAI47_13430	0.16	-1.8
2,851,169	-		IAI47_13430	0.16	-0.5
2,851,169	-		IAI47_13430	0.16	-0.7
2,851,169	-		IAI47_13430	0.16	-2.2
2,851,169	-		IAI47_13430	0.16	+3.0
2,851,205	-		IAI47_13430	0.19	+0.1
2,851,205	-		IAI47_13430	0.19	-1.8
2,851,255	+		IAI47_13430	0.25	+0.5
2,851,255	+		IAI47_13430	0.25	-1.1
2,851,255	+		IAI47_13430	0.25	+0.1
2,851,256	-		IAI47_13430	0.25	+0.8
2,851,256	-		IAI47_13430	0.25	-1.1
2,851,308	+		IAI47_13430	0.30	-1.5
2,851,308	+		IAI47_13430	0.30	-1.7
2,851,335	-		IAI47_13430	0.33	+1.9
2,851,335	-		IAI47_13430	0.33	+1.7
2,851,444	+		IAI47_13430	0.45	+0.4
2,851,445	-		IAI47_13430	0.45	+0.9
2,851,557	+		IAI47_13430	0.56	-1.1
2,851,557	+		IAI47_13430	0.56	-1.5
2,851,631	+		IAI47_13430	0.64	-0.3
2,851,631	+		IAI47_13430	0.64	+0.5
2,851,631	+		IAI47_13430	0.64	+1.4
2,851,671	-		IAI47_13430	0.68	-0.7
2,851,772	+		IAI47_13430	0.79	+0.2
2,851,772	+		IAI47_13430	0.79	+0.3
2,851,772	+		IAI47_13430	0.79	-0.7
2,851,773	-		IAI47_13430	0.79	+0.9
2,851,773	-		IAI47_13430	0.79	+0.1
2,851,809	-		IAI47_13430	0.83	+0.8
2,851,831	+		IAI47_13430	0.85	-1.5
2,851,832	-		IAI47_13430	0.85	-0.2
2,851,832	-		IAI47_13430	0.85	-0.2
2,851,855	-		IAI47_13430	0.88	+1.9
2,851,895	-				-0.2
2,851,895	-				+1.9
2,851,960	-				-0.9
2,851,960	-				-0.9
2,851,970	+				+0.5
2,851,970	+				+0.4
2,851,970	+				-0.5
2,851,971	-				+0.1
2,851,971	-				+0.3
2,852,182	+		IAI47_13435	0.15	+0.1
2,852,182	+		IAI47_13435	0.15	+1.0
2,852,183	-		IAI47_13435	0.15	-0.3
2,852,221	-		IAI47_13435	0.18	-0.5
2,852,221	-		IAI47_13435	0.18	-0.7
2,852,270	-		IAI47_13435	0.22	+0.7
2,852,284	+		IAI47_13435	0.23	-0.1
2,852,284	+		IAI47_13435	0.23	-0.9
2,852,284	+		IAI47_13435	0.23	-0.3
2,852,341	+		IAI47_13435	0.27	-1.1
2,852,341	+		IAI47_13435	0.27	+0.0
2,852,350	+		IAI47_13435	0.27	+1.4
2,852,350	+		IAI47_13435	0.27	-1.7
2,852,350	+		IAI47_13435	0.27	-1.3
2,852,351	-		IAI47_13435	0.28	-0.9
2,852,351	-		IAI47_13435	0.28	+0.0
2,852,361	+		IAI47_13435	0.28	+1.3
2,852,361	+		IAI47_13435	0.28	-0.4
2,852,362	-		IAI47_13435	0.28	-1.0
2,852,362	-		IAI47_13435	0.28	+0.5
2,852,362	-		IAI47_13435	0.28	-2.6
2,852,362	-		IAI47_13435	0.28	-1.3
2,852,362	-		IAI47_13435	0.28	+1.3
2,852,362	-		IAI47_13435	0.28	-0.5
2,852,377	+		IAI47_13435	0.29	+1.6
2,852,378	-		IAI47_13435	0.29	-1.3
2,852,389	-		IAI47_13435	0.30	-0.6
2,852,389	-		IAI47_13435	0.30	+0.3
2,852,417	-		IAI47_13435	0.32	+0.5
2,852,494	+		IAI47_13435	0.38	-0.5
2,852,494	+		IAI47_13435	0.38	+1.2
2,852,494	+		IAI47_13435	0.38	-0.6
2,852,494	+		IAI47_13435	0.38	-1.3
2,852,494	+		IAI47_13435	0.38	-1.9
2,852,495	-		IAI47_13435	0.38	-1.8
2,852,495	-		IAI47_13435	0.38	+0.3
2,852,495	-		IAI47_13435	0.38	+1.5
2,852,618	-		IAI47_13435	0.47	-1.7
2,852,618	-		IAI47_13435	0.47	-0.0
2,852,662	+		IAI47_13435	0.50	-1.8
2,852,662	+		IAI47_13435	0.50	+0.3
2,852,662	+		IAI47_13435	0.50	-0.1
2,852,662	+		IAI47_13435	0.50	-0.6
2,852,663	-		IAI47_13435	0.50	-0.6
2,852,663	-		IAI47_13435	0.50	-0.3
2,852,663	-		IAI47_13435	0.50	-2.3
2,852,838	+		IAI47_13435	0.63	-1.5
2,852,839	+		IAI47_13435	0.63	-0.5
2,852,840	-		IAI47_13435	0.63	-0.9
2,852,840	-		IAI47_13435	0.63	-0.3
2,852,848	+		IAI47_13435	0.64	+2.2
2,852,963	+		IAI47_13435	0.72	-0.1
2,852,963	+		IAI47_13435	0.72	+3.5
2,852,963	+		IAI47_13435	0.72	-1.3
2,852,963	+		IAI47_13435	0.72	-0.7
2,852,963	+		IAI47_13435	0.72	-0.5
2,852,963	+		IAI47_13435	0.72	+2.4
2,852,964	-		IAI47_13435	0.72	+0.3
2,852,964	-		IAI47_13435	0.72	-0.7
2,852,964	-		IAI47_13435	0.72	-2.2
2,852,964	-		IAI47_13435	0.72	-1.9
2,852,965	+		IAI47_13435	0.72	-0.5
2,852,965	+		IAI47_13435	0.72	-1.5
2,852,965	+		IAI47_13435	0.72	-0.5
2,852,965	+		IAI47_13435	0.72	-1.0
2,852,965	+		IAI47_13435	0.72	-1.7
2,852,966	-		IAI47_13435	0.72	+0.3
2,852,966	-		IAI47_13435	0.72	-1.1
2,852,966	-		IAI47_13435	0.72	+0.4
2,852,966	-		IAI47_13435	0.72	-0.1
2,852,966	-		IAI47_13435	0.72	-0.2
2,852,966	-		IAI47_13435	0.72	-1.0
2,852,966	-		IAI47_13435	0.72	+0.7
2,853,045	+		IAI47_13435	0.78	-0.5
2,853,045	+		IAI47_13435	0.78	-0.4
2,853,046	-		IAI47_13435	0.78	-1.2
2,853,046	-		IAI47_13435	0.78	-1.2
2,853,054	+		IAI47_13435	0.79	+0.9
2,853,054	+		IAI47_13435	0.79	-0.2
2,853,054	+		IAI47_13435	0.79	-0.2
2,853,055	-		IAI47_13435	0.79	-0.3
2,853,167	+		IAI47_13435	0.87	-0.7
2,853,176	+		IAI47_13435	0.88	+0.7
2,853,181	+		IAI47_13435	0.88	+2.1
2,853,181	+		IAI47_13435	0.88	-0.3
2,853,182	-		IAI47_13435	0.88	-2.1
2,853,268	+				+0.6
2,853,269	-				-0.8
2,853,269	-				-0.1
2,853,274	+				+0.9
2,853,274	+				+0.8
2,853,274	+				+1.0
2,853,274	+				-0.6
2,853,274	+				+0.9
2,853,275	-				+1.5
2,853,275	-				-1.8
2,853,275	-				-0.1
2,853,275	-				-1.2
2,853,285	+				-0.1
2,853,285	+				+0.7
2,853,285	+				-1.0
2,853,313	+				-0.4
2,853,314	-				-0.1
2,853,347	+				+2.0
2,853,347	+				-1.3
2,853,347	+				+0.1
2,853,347	+				+0.2
2,853,347	+				-1.9
2,853,347	+				+0.2
2,853,347	+				+0.9
2,853,348	-				-1.0
2,853,348	-				+1.9
2,853,348	-				-0.5
2,853,348	-				+0.6
2,853,348	-				-0.1
2,853,389	+				-1.0
2,853,390	-				-1.4
2,853,404	+				-1.5
2,853,405	-				-1.1
2,853,446	+				-1.3
2,853,446	+				+0.1
2,853,446	+				-0.9
2,853,446	+				+0.7
2,853,447	-				+0.5
2,853,447	-				-2.5
2,853,447	-				-0.1
2,853,447	-				-0.2
2,853,447	-				-0.1
2,853,455	+				-1.1
2,853,456	-				-0.2
2,853,456	-				+1.1
2,853,456	-				-0.6
2,853,469	+				-1.9
2,853,470	-				-2.0
2,853,470	-				-0.5
2,853,470	-				+3.7
2,853,478	+				+1.2
2,853,478	+				-0.7
2,853,479	-				+1.9
2,853,480	+				+1.0
2,853,481	-				-0.8
2,853,481	-				+0.1
2,853,496	+				-1.2
2,853,497	-				-1.4
2,853,507	+				-0.2
2,853,520	+				+3.3
2,853,520	+				+0.1
2,853,520	+				+1.5
2,853,520	+				+0.8
2,853,520	+				-0.1
2,853,521	-				-0.7
2,853,521	-				+2.1
2,853,565	+				+1.2
2,853,565	+				+0.8
2,853,566	-				+3.1
2,853,566	-				+0.1
2,853,569	+				-1.1
2,853,569	+				+1.1
2,853,569	+				+0.1
2,853,570	-				+0.5
2,853,570	-				+1.9
2,853,570	-				-0.1
2,853,570	-				-0.4
2,853,570	-				+0.8
2,853,570	-				-0.3
2,853,570	-				+2.3
2,853,677	-		IAI47_13440	0.29	-0.2
2,853,721	+		IAI47_13440	0.40	-1.8
2,853,722	-		IAI47_13440	0.40	-1.4
2,853,722	-		IAI47_13440	0.40	+1.5
2,853,724	+		IAI47_13440	0.41	-0.2
2,853,725	-		IAI47_13440	0.41	+1.1
2,853,725	-		IAI47_13440	0.41	+2.1
2,853,725	-		IAI47_13440	0.41	-0.1
2,853,725	-		IAI47_13440	0.41	+1.8
2,853,725	-		IAI47_13440	0.41	+1.1
2,853,725	-		IAI47_13440	0.41	-0.9
2,853,761	+		IAI47_13440	0.50	-1.4
2,853,761	+		IAI47_13440	0.50	-1.1
2,853,761	+		IAI47_13440	0.50	-1.2
2,853,762	-		IAI47_13440	0.50	+2.8
2,853,762	-		IAI47_13440	0.50	+2.9
2,853,762	-		IAI47_13440	0.50	+1.1
2,853,765	+		IAI47_13440	0.51	-1.2
2,853,766	-		IAI47_13440	0.51	-1.5
2,853,766	-		IAI47_13440	0.51	+0.1
2,853,766	-		IAI47_13440	0.51	-0.6
2,853,766	-		IAI47_13440	0.51	-0.5
2,853,814	+		IAI47_13440	0.64	+1.5
2,853,814	+		IAI47_13440	0.64	+0.5
2,853,814	+		IAI47_13440	0.64	-1.5
2,853,814	+		IAI47_13440	0.64	+0.4
2,853,814	+		IAI47_13440	0.64	-0.7
2,853,814	+		IAI47_13440	0.64	-0.2
2,853,814	+		IAI47_13440	0.64	-0.2
2,853,814	+		IAI47_13440	0.64	+0.1
2,853,814	+		IAI47_13440	0.64	-1.2
2,853,815	-		IAI47_13440	0.64	-1.3
2,853,815	-		IAI47_13440	0.64	-1.1
2,853,815	-		IAI47_13440	0.64	+1.8
2,853,815	-		IAI47_13440	0.64	+0.4
2,853,815	-		IAI47_13440	0.64	-0.2
2,853,815	-		IAI47_13440	0.64	+1.7
2,853,815	-		IAI47_13440	0.64	-2.0
2,853,815	-		IAI47_13440	0.64	-0.1
2,853,815	-		IAI47_13440	0.64	-0.5
2,853,830	+		IAI47_13440	0.68	-0.3
2,853,830	+		IAI47_13440	0.68	-1.3
2,853,831	-		IAI47_13440	0.68	-1.6
2,853,891	+		IAI47_13440	0.83	+0.4
2,853,891	+		IAI47_13440	0.83	-1.5
2,853,891	+		IAI47_13440	0.83	-0.7
2,853,891	+		IAI47_13440	0.83	-0.8
2,853,892	-		IAI47_13440	0.83	+0.2
2,853,892	-		IAI47_13440	0.83	+1.7
2,853,892	-		IAI47_13440	0.83	-0.8
2,853,899	+		IAI47_13440	0.85	-0.3
2,853,899	+		IAI47_13440	0.85	-1.0
2,853,900	-		IAI47_13440	0.85	+1.0
2,853,905	+		IAI47_13440	0.87	+1.4
2,853,905	+		IAI47_13440	0.87	+0.6
2,853,905	+		IAI47_13440	0.87	+1.3
2,853,905	+		IAI47_13440	0.87	-1.9
2,853,906	-		IAI47_13440	0.87	+0.3
2,853,906	-		IAI47_13440	0.87	-1.6
2,853,913	-		IAI47_13440	0.89	-1.6
2,853,913	-		IAI47_13440	0.89	+1.7
2,853,938	+				-0.8
2,853,945	-				-0.8
2,853,945	-				+0.7
2,854,028	+				+0.4
2,854,053	-				+0.8
2,854,053	-				+0.7
2,854,056	+				+0.4
2,854,056	+				+1.3
2,854,056	+				+0.8
2,854,057	-				+0.7
2,854,057	-				-1.0
2,854,057	-				+1.7
2,854,057	-				-1.2
2,854,057	-				-0.0
2,854,057	-				+0.7
2,854,093	-				+0.1
2,854,135	+				+3.0
2,854,164	+				+0.5
2,854,184	-				-1.6
2,854,184	-				-0.3
2,854,184	-				-0.5
2,854,184	-				-0.4
2,854,184	-				-1.5
2,854,234	-		IAI47_13445	0.13	-0.1
2,854,285	-		IAI47_13445	0.20	-0.7
2,854,285	-		IAI47_13445	0.20	+0.2
2,854,285	-		IAI47_13445	0.20	+0.2
2,854,285	-		IAI47_13445	0.20	+0.8
2,854,299	+		IAI47_13445	0.21	+0.9
2,854,300	+		IAI47_13445	0.22	-1.3
2,854,301	-		IAI47_13445	0.22	-1.6
2,854,312	+		IAI47_13445	0.23	+2.8
2,854,312	+		IAI47_13445	0.23	+1.7
2,854,312	+		IAI47_13445	0.23	+0.1
2,854,313	-		IAI47_13445	0.23	+2.0
2,854,344	-		IAI47_13445	0.27	-0.8
2,854,344	-		IAI47_13445	0.27	-1.1
2,854,344	-		IAI47_13445	0.27	-0.5