Strain Fitness in Pantoea sp. MT58 around IAI47_11850

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,511,076	+				-1.5
2,511,076	+				-0.9
2,511,077	-				+2.3
2,511,094	+				-1.1
2,511,094	+				+0.1
2,511,118	+		IAI47_11840	0.10	+0.8
2,511,118	+		IAI47_11840	0.10	+0.9
2,511,118	+		IAI47_11840	0.10	+0.5
2,511,119	-		IAI47_11840	0.11	-0.2
2,511,119	-		IAI47_11840	0.11	+0.1
2,511,119	-		IAI47_11840	0.11	+0.6
2,511,119	-		IAI47_11840	0.11	-0.8
2,511,119	-		IAI47_11840	0.11	-0.8
2,511,122	+		IAI47_11840	0.11	+2.1
2,511,122	+		IAI47_11840	0.11	-2.3
2,511,143	+		IAI47_11840	0.16	+0.8
2,511,144	-		IAI47_11840	0.17	-0.4
2,511,145	+		IAI47_11840	0.17	+1.7
2,511,145	+		IAI47_11840	0.17	-2.2
2,511,296	+		IAI47_11840	0.53	+1.3
2,511,296	+		IAI47_11840	0.53	+1.9
2,511,296	+		IAI47_11840	0.53	-0.3
2,511,297	-		IAI47_11840	0.54	-2.1
2,511,297	-		IAI47_11840	0.54	+1.7
2,511,369	-		IAI47_11840	0.71	+0.2
2,511,398	+		IAI47_11840	0.78	+0.2
2,511,399	-		IAI47_11840	0.78	+1.4
2,511,399	-		IAI47_11840	0.78	-0.4
2,511,399	-		IAI47_11840	0.78	+0.8
2,511,401	+		IAI47_11840	0.79	-0.7
2,511,401	+		IAI47_11840	0.79	+1.2
2,511,401	+		IAI47_11840	0.79	+1.9
2,511,401	+		IAI47_11840	0.79	-0.8
2,511,401	+		IAI47_11840	0.79	-0.9
2,511,401	+		IAI47_11840	0.79	+0.4
2,511,402	-		IAI47_11840	0.79	+0.3
2,511,402	-		IAI47_11840	0.79	-0.2
2,511,404	+		IAI47_11840	0.79	+1.1
2,511,404	+		IAI47_11840	0.79	-0.6
2,511,404	+		IAI47_11840	0.79	-0.3
2,511,405	-		IAI47_11840	0.80	-0.7
2,511,405	-		IAI47_11840	0.80	+2.7
2,511,405	-		IAI47_11840	0.80	+0.1
2,511,405	-		IAI47_11840	0.80	-1.9
2,511,406	+		IAI47_11840	0.80	-0.9
2,511,407	-		IAI47_11840	0.80	+1.5
2,511,488	+				-0.5
2,511,488	+				+1.8
2,511,488	+				+0.7
2,511,488	+				+1.4
2,511,488	+				-1.6
2,511,489	-				-1.0
2,511,489	-				-1.9
2,511,489	-				-1.7
2,511,506	+				+1.1
2,511,506	+				-1.4
2,511,506	+				+0.1
2,511,507	-				+1.4
2,511,533	+				+1.2
2,511,534	-				+0.1
2,511,579	+		IAI47_11845	0.19	+0.8
2,511,580	-		IAI47_11845	0.20	+1.4
2,511,608	+		IAI47_11845	0.27	-1.0
2,511,609	-		IAI47_11845	0.27	-0.1
2,511,685	-		IAI47_11845	0.47	-2.2
2,511,705	+		IAI47_11845	0.52	+0.5
2,511,760	+		IAI47_11845	0.66	-0.9
2,511,760	+		IAI47_11845	0.66	+1.4
2,511,761	-		IAI47_11845	0.67	-0.9
2,511,761	-		IAI47_11845	0.67	-0.4
2,511,767	+		IAI47_11845	0.68	-0.6
2,511,767	+		IAI47_11845	0.68	-0.5
2,511,768	-		IAI47_11845	0.68	-0.5
2,511,811	-		IAI47_11845	0.80	+0.6
2,511,874	+				-0.3
2,511,874	+				+0.5
2,511,874	+				+0.5
2,511,874	+				+0.2
2,511,875	-				-1.8
2,511,926	+				-0.5
2,511,926	+				-0.6
2,511,926	+				+0.1
2,511,927	-				-1.2
2,511,927	-				+0.5
2,511,927	-				+0.9
2,511,927	-				+0.4
2,511,931	+				+0.2
2,511,931	+				-1.4
2,511,932	-				-0.3
2,512,025	-				+1.1
2,512,056	+				-1.5
2,512,056	+				+1.2
2,512,075	-				+0.3
2,512,100	+		IAI47_11850	0.15	+1.1
2,512,101	-		IAI47_11850	0.16	-0.5
2,512,101	-		IAI47_11850	0.16	+1.2
2,512,101	-		IAI47_11850	0.16	+0.2
2,512,134	+		IAI47_11850	0.34	-1.5
2,512,134	+		IAI47_11850	0.34	-0.6
2,512,134	+		IAI47_11850	0.34	+4.3
2,512,135	-		IAI47_11850	0.34	+0.5
2,512,135	-		IAI47_11850	0.34	-0.5
2,512,157	-		IAI47_11850	0.47	+1.5
2,512,222	+		IAI47_11850	0.83	+1.7
2,512,299	+				+0.7
2,512,299	+				-0.8
2,512,300	-				-0.1
2,512,300	-				-1.8
2,512,307	-				-2.8
2,512,330	+				-1.1
2,512,331	-				+0.0
2,512,346	-				-0.1
2,512,346	-				-0.5
2,512,352	+				+0.2
2,512,389	+				-0.5
2,512,389	+				-0.8
2,512,390	-				+1.1
2,512,390	-				+1.5
2,512,390	-				-1.8
2,512,395	+				+1.2
2,512,395	+				+1.5
2,512,396	-				-1.0
2,512,396	-				-1.5
2,512,396	-				-0.4
2,512,396	-				-1.6
2,512,396	-				+1.5
2,512,396	-				-1.8
2,512,396	-				-0.2
2,512,396	-				+0.9
2,512,396	-				+0.7
2,512,403	+				-2.6
2,512,403	+				+1.5
2,512,404	-				+0.3
2,512,404	-				+1.3
2,512,434	-				+1.5
2,512,477	+				+2.0
2,512,477	+				+0.5
2,512,478	-				-0.3
2,512,478	-				-1.8
2,512,488	-				-1.6
2,512,488	-				-0.2
2,512,563	+		IAI47_11855	0.29	+2.0
2,512,563	+		IAI47_11855	0.29	+0.4
2,512,563	+		IAI47_11855	0.29	-2.3
2,512,563	+		IAI47_11855	0.29	+0.7
2,512,564	-		IAI47_11855	0.29	-0.5
2,512,564	-		IAI47_11855	0.29	+0.7
2,512,679	+		IAI47_11855	0.64	+1.1
2,512,679	+		IAI47_11855	0.64	+0.4
2,512,679	+		IAI47_11855	0.64	+1.8
2,512,680	-		IAI47_11855	0.65	+1.9
2,512,680	-		IAI47_11855	0.65	+1.1
2,512,683	+		IAI47_11855	0.65	+0.7
2,512,683	+		IAI47_11855	0.65	-0.2
2,512,683	+		IAI47_11855	0.65	-1.0
2,512,683	+		IAI47_11855	0.65	+1.0
2,512,683	+		IAI47_11855	0.65	-0.5
2,512,683	+		IAI47_11855	0.65	+1.2
2,512,684	-		IAI47_11855	0.66	-1.4
2,512,684	-		IAI47_11855	0.66	-1.5
2,512,684	-		IAI47_11855	0.66	-0.5
2,512,713	+		IAI47_11855	0.75	-1.8
2,512,713	+		IAI47_11855	0.75	+0.4
2,512,713	+		IAI47_11855	0.75	+1.5
2,512,713	+		IAI47_11855	0.75	+0.1
2,512,714	-		IAI47_11855	0.75	+1.1
2,512,716	+		IAI47_11855	0.75	-0.6
2,512,717	-		IAI47_11855	0.76	-0.8
2,512,717	-		IAI47_11855	0.76	-1.5
2,512,717	-		IAI47_11855	0.76	-0.2
2,512,717	-		IAI47_11855	0.76	+3.0
2,512,717	-		IAI47_11855	0.76	+0.9
2,512,736	+		IAI47_11855	0.82	+1.1
2,512,736	+		IAI47_11855	0.82	-0.6
2,512,736	+		IAI47_11855	0.82	+0.2
2,512,736	+		IAI47_11855	0.82	+1.3
2,512,737	-		IAI47_11855	0.82	-0.4
2,512,737	-		IAI47_11855	0.82	-1.9
2,512,737	-		IAI47_11855	0.82	-0.7
2,512,737	-		IAI47_11855	0.82	-0.1
2,512,737	-		IAI47_11855	0.82	-0.2
2,512,754	+		IAI47_11855	0.87	-2.5
2,512,754	+		IAI47_11855	0.87	-0.3
2,512,761	+		IAI47_11855	0.89	+0.8
2,512,762	-		IAI47_11855	0.89	+2.1
2,512,794	+				+1.7
2,512,794	+				+0.4
2,512,795	-				-0.5
2,512,824	-				+0.4
2,512,885	+				+2.0
2,512,885	+				+1.8
2,512,886	-				+2.6
2,512,886	-				-0.1
2,512,886	-				+1.7
2,512,886	-				+2.7
2,512,886	-				+1.9
2,512,887	+				+1.7
2,512,887	+				+0.0
2,512,888	-				-1.5
2,512,888	-				+1.1
2,512,888	-				+0.6
2,512,888	-				+2.4
2,512,888	-				-2.0
2,512,888	-				-1.9
2,513,003	+		IAI47_11860	0.26	+0.7
2,513,003	+		IAI47_11860	0.26	-0.9
2,513,004	-		IAI47_11860	0.26	+0.9
2,513,004	-		IAI47_11860	0.26	+0.3
2,513,004	-		IAI47_11860	0.26	-2.7
2,513,052	+		IAI47_11860	0.35	+0.0
2,513,053	-		IAI47_11860	0.35	+2.9
2,513,091	+		IAI47_11860	0.42	+2.0
2,513,091	+		IAI47_11860	0.42	-0.3
2,513,091	+		IAI47_11860	0.42	+1.4
2,513,091	+		IAI47_11860	0.42	+1.0
2,513,091	+		IAI47_11860	0.42	+0.2
2,513,103	+		IAI47_11860	0.44	+0.5
2,513,176	+		IAI47_11860	0.57	-0.8
2,513,176	+		IAI47_11860	0.57	+1.8
2,513,182	+		IAI47_11860	0.58	+0.8
2,513,236	+		IAI47_11860	0.68	-1.1
2,513,236	+		IAI47_11860	0.68	-0.3
2,513,236	+		IAI47_11860	0.68	+0.5
2,513,237	-		IAI47_11860	0.68	-0.1
2,513,237	-		IAI47_11860	0.68	+0.7
2,513,237	-		IAI47_11860	0.68	+3.4
2,513,237	-		IAI47_11860	0.68	+2.0
2,513,237	-		IAI47_11860	0.68	-1.1