Strain Fitness in Pantoea sp. MT58 around IAI47_11655

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,468,486	+		IAI47_11645	0.85	-0.7
2,468,504	-		IAI47_11645	0.87	+1.4
2,468,526	-		IAI47_11645	0.89	+0.9
2,468,554	+				-0.0
2,468,554	+				+2.0
2,468,554	+				-0.1
2,468,555	-				+1.4
2,468,555	-				+2.5
2,468,555	-				+1.0
2,468,555	-				-0.5
2,468,555	-				+3.6
2,468,555	-				+3.1
2,468,569	-				+1.6
2,468,671	-				+0.3
2,468,671	-				-1.1
2,468,679	+				+0.2
2,468,679	+				+1.9
2,468,685	+				+4.4
2,468,685	+				-2.2
2,468,686	-				+0.8
2,468,686	-				+1.0
2,468,752	-				+0.4
2,468,829	+		IAI47_11650	0.16	+1.5
2,468,830	-		IAI47_11650	0.17	+1.7
2,468,862	+		IAI47_11650	0.23	-2.6
2,468,862	+		IAI47_11650	0.23	-1.4
2,468,863	-		IAI47_11650	0.23	+0.0
2,468,863	-		IAI47_11650	0.23	-1.1
2,468,878	+		IAI47_11650	0.27	+0.5
2,468,878	+		IAI47_11650	0.27	+0.4
2,468,879	-		IAI47_11650	0.27	+2.0
2,468,879	-		IAI47_11650	0.27	-0.7
2,468,879	-		IAI47_11650	0.27	+1.1
2,468,901	+		IAI47_11650	0.31	+0.9
2,468,901	+		IAI47_11650	0.31	+0.1
2,468,902	-		IAI47_11650	0.31	+1.9
2,468,902	-		IAI47_11650	0.31	+0.5
2,468,946	+		IAI47_11650	0.41	-1.3
2,468,946	+		IAI47_11650	0.41	+0.6
2,468,947	-		IAI47_11650	0.41	-0.3
2,468,947	-		IAI47_11650	0.41	-0.1
2,468,947	-		IAI47_11650	0.41	+0.2
2,468,972	-		IAI47_11650	0.46	-1.6
2,468,977	+		IAI47_11650	0.47	-1.1
2,468,977	+		IAI47_11650	0.47	-2.3
2,468,977	+		IAI47_11650	0.47	-2.1
2,468,977	+		IAI47_11650	0.47	-0.5
2,468,977	+		IAI47_11650	0.47	+0.5
2,468,978	-		IAI47_11650	0.47	-0.5
2,468,978	-		IAI47_11650	0.47	-0.3
2,468,978	-		IAI47_11650	0.47	+0.6
2,468,992	+		IAI47_11650	0.50	-1.6
2,469,004	+		IAI47_11650	0.53	+3.3
2,469,034	+		IAI47_11650	0.59	-0.8
2,469,035	-		IAI47_11650	0.59	+0.5
2,469,035	-		IAI47_11650	0.59	+0.3
2,469,035	-		IAI47_11650	0.59	+2.4
2,469,035	-		IAI47_11650	0.59	+1.9
2,469,073	+		IAI47_11650	0.67	-1.0
2,469,074	-		IAI47_11650	0.67	+0.5
2,469,074	-		IAI47_11650	0.67	+0.6
2,469,079	+		IAI47_11650	0.68	-2.5
2,469,080	-		IAI47_11650	0.68	+0.4
2,469,085	+		IAI47_11650	0.69	-0.6
2,469,151	+		IAI47_11650	0.83	-1.2
2,469,151	+		IAI47_11650	0.83	+0.2
2,469,151	+		IAI47_11650	0.83	+1.8
2,469,151	+		IAI47_11650	0.83	+1.9
2,469,152	-		IAI47_11650	0.83	+0.5
2,469,152	-		IAI47_11650	0.83	-0.2
2,469,152	-		IAI47_11650	0.83	+2.2
2,469,152	-		IAI47_11650	0.83	+1.1
2,469,154	+		IAI47_11650	0.84	+0.4
2,469,197	-				+1.7
2,469,214	+				+1.2
2,469,215	-				-0.8
2,469,221	-				-0.8
2,469,221	-				-1.0
2,469,226	+				-1.6
2,469,407	+				+2.1
2,469,407	+				+0.2
2,469,407	+				-1.0
2,469,409	+				+1.1
2,469,410	-				+0.1
2,469,487	+				+0.6
2,469,493	-				+0.0
2,469,568	+		IAI47_11655	0.45	-1.1
2,469,655	+		IAI47_11655	0.86	-1.6
2,469,656	-		IAI47_11655	0.86	-2.4
2,469,662	+		IAI47_11655	0.89	-1.5
2,469,662	+		IAI47_11655	0.89	-0.3
2,469,663	-				-0.5
2,469,780	-				-1.1
2,469,780	-				+0.0
2,469,786	+				+1.3
2,469,787	-				-1.1
2,469,787	-				-0.2
2,469,811	-				-0.3
2,469,881	+				-0.2
2,469,882	-				-1.0
2,469,885	-				+1.3
2,469,966	+		IAI47_11660	0.13	+1.2
2,469,986	+		IAI47_11660	0.14	+2.0
2,469,986	+		IAI47_11660	0.14	+0.1
2,469,986	+		IAI47_11660	0.14	+0.1
2,469,986	+		IAI47_11660	0.14	-1.0
2,469,986	+		IAI47_11660	0.14	+0.2
2,469,986	+		IAI47_11660	0.14	-1.7
2,469,986	+		IAI47_11660	0.14	-0.4
2,469,986	+		IAI47_11660	0.14	-0.5
2,469,987	-		IAI47_11660	0.14	-0.9
2,469,987	-		IAI47_11660	0.14	+1.4
2,469,987	-		IAI47_11660	0.14	-0.2
2,469,987	-		IAI47_11660	0.14	-0.5
2,470,006	+		IAI47_11660	0.15	-1.0
2,470,006	+		IAI47_11660	0.15	+0.0
2,470,073	+		IAI47_11660	0.20	+0.4
2,470,074	-		IAI47_11660	0.20	+0.2
2,470,074	-		IAI47_11660	0.20	+0.3
2,470,074	-		IAI47_11660	0.20	+0.5
2,470,103	+		IAI47_11660	0.22	-0.6
2,470,155	-		IAI47_11660	0.25	-0.4
2,470,189	-		IAI47_11660	0.27	+2.0
2,470,231	-		IAI47_11660	0.30	+0.3
2,470,231	-		IAI47_11660	0.30	-0.6
2,470,392	-		IAI47_11660	0.41	-0.3
2,470,398	+		IAI47_11660	0.41	+0.2
2,470,431	-		IAI47_11660	0.44	+1.9
2,470,431	-		IAI47_11660	0.44	+1.7
2,470,451	+		IAI47_11660	0.45	-2.1
2,470,451	+		IAI47_11660	0.45	+1.8
2,470,451	+		IAI47_11660	0.45	-0.6
2,470,451	+		IAI47_11660	0.45	+3.5
2,470,451	+		IAI47_11660	0.45	-1.8
2,470,451	+		IAI47_11660	0.45	+1.1
2,470,452	-		IAI47_11660	0.45	-1.2
2,470,452	-		IAI47_11660	0.45	+2.5
2,470,452	-		IAI47_11660	0.45	-0.0
2,470,452	-		IAI47_11660	0.45	+1.0
2,470,513	-		IAI47_11660	0.49	-1.2
2,470,523	+		IAI47_11660	0.50	-0.8
2,470,523	+		IAI47_11660	0.50	-0.5
2,470,524	-		IAI47_11660	0.50	-0.5
2,470,566	-		IAI47_11660	0.53	+0.4
2,470,566	-		IAI47_11660	0.53	+2.1
2,470,566	-		IAI47_11660	0.53	+0.9
2,470,566	-		IAI47_11660	0.53	-1.6
2,470,566	-		IAI47_11660	0.53	+0.1
2,470,607	+		IAI47_11660	0.55	-0.9
2,470,607	+		IAI47_11660	0.55	+2.0
2,470,608	-		IAI47_11660	0.55	+3.0