Strain Fitness in Pantoea sp. MT58 around IAI47_11585

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,456,082	+		IAI47_11580	0.67	+1.2
2,456,083	-		IAI47_11580	0.68	+0.7
2,456,202	-		IAI47_11580	0.72	+2.1
2,456,377	+		IAI47_11580	0.79	+1.0
2,456,377	+		IAI47_11580	0.79	+0.1
2,456,377	+		IAI47_11580	0.79	+0.5
2,456,377	+		IAI47_11580	0.79	-0.6
2,456,378	-		IAI47_11580	0.79	+0.6
2,456,378	-		IAI47_11580	0.79	+1.7
2,456,465	+		IAI47_11580	0.82	+1.3
2,456,466	-		IAI47_11580	0.82	-0.5
2,456,466	-		IAI47_11580	0.82	+0.2
2,456,472	+		IAI47_11580	0.82	+0.8
2,456,473	-		IAI47_11580	0.82	+0.4
2,456,570	+		IAI47_11580	0.86	+0.5
2,456,570	+		IAI47_11580	0.86	-0.1
2,456,570	+		IAI47_11580	0.86	+0.5
2,456,571	-		IAI47_11580	0.86	+1.8
2,456,571	-		IAI47_11580	0.86	-1.1
2,456,611	+		IAI47_11580	0.88	-1.7
2,456,611	+		IAI47_11580	0.88	+2.5
2,456,612	-		IAI47_11580	0.88	+2.6
2,456,612	-		IAI47_11580	0.88	+1.1
2,456,626	+		IAI47_11580	0.88	-0.4
2,456,626	+		IAI47_11580	0.88	+1.3
2,456,627	-		IAI47_11580	0.88	+0.9
2,456,627	-		IAI47_11580	0.88	+0.1
2,456,657	+		IAI47_11580	0.90	+1.1
2,456,658	-		IAI47_11580	0.90	+1.1
2,456,772	+				-0.4
2,456,772	+				+1.4
2,456,772	+				+0.4
2,456,772	+				-0.6
2,456,772	+				-1.1
2,456,772	+				+2.6
2,456,772	+				-1.1
2,456,773	-				+1.3
2,456,773	-				+0.9
2,456,827	+				+1.5
2,456,827	+				-1.5
2,456,827	+				-0.6
2,456,827	+				+0.5
2,456,827	+				-0.1
2,456,827	+				+0.5
2,456,828	-				-0.1
2,456,828	-				+0.6
2,456,828	-				+2.9
2,456,828	-				-0.3
2,456,828	-				+1.7
2,456,828	-				-2.6
2,456,876	+				+0.4
2,456,876	+				+2.0
2,456,877	-				+0.6
2,456,880	+				-0.5
2,456,880	+				+3.5
2,456,880	+				-0.2
2,456,881	-				+1.6
2,456,881	-				+2.2
2,456,881	-				+0.7
2,456,881	-				+0.2
2,456,888	+				-0.8
2,456,905	-				+2.2
2,456,930	+				+0.3
2,456,930	+				+1.7
2,456,930	+				+0.1
2,456,931	-				-1.0
2,456,931	-				+2.6
2,456,931	-				+0.7
2,456,931	-				-1.6
2,456,931	-				-0.9
2,456,965	+				+0.3
2,456,966	-				+3.4
2,457,065	-				+1.7
2,457,157	+		IAI47_11585	0.16	+2.4
2,457,157	+		IAI47_11585	0.16	-1.1
2,457,158	-		IAI47_11585	0.17	+1.1
2,457,158	-		IAI47_11585	0.17	-1.2
2,457,158	-		IAI47_11585	0.17	-1.7
2,457,158	-		IAI47_11585	0.17	+0.0
2,457,158	-		IAI47_11585	0.17	-0.6
2,457,217	+		IAI47_11585	0.22	-2.5
2,457,218	-		IAI47_11585	0.22	+2.6
2,457,218	-		IAI47_11585	0.22	+0.4
2,457,274	-		IAI47_11585	0.28	-0.2
2,457,274	-		IAI47_11585	0.28	+0.5
2,457,274	-		IAI47_11585	0.28	-1.6
2,457,406	+		IAI47_11585	0.40	-0.2
2,457,407	-		IAI47_11585	0.40	+0.1
2,457,407	-		IAI47_11585	0.40	+0.5
2,457,548	-		IAI47_11585	0.54	-0.8
2,457,548	-		IAI47_11585	0.54	-0.3
2,457,548	-		IAI47_11585	0.54	+0.2
2,457,548	-		IAI47_11585	0.54	-0.8
2,457,548	-		IAI47_11585	0.54	-1.6
2,457,616	+		IAI47_11585	0.60	+0.8
2,457,616	+		IAI47_11585	0.60	-1.1
2,457,617	-		IAI47_11585	0.60	+4.4
2,457,617	-		IAI47_11585	0.60	-0.6
2,457,617	-		IAI47_11585	0.60	+0.2
2,457,703	+		IAI47_11585	0.69	+0.2
2,457,703	+		IAI47_11585	0.69	+0.8
2,457,703	+		IAI47_11585	0.69	-1.1
2,457,703	+		IAI47_11585	0.69	-1.7
2,457,704	-		IAI47_11585	0.69	-1.1
2,457,757	+		IAI47_11585	0.74	+0.9
2,457,757	+		IAI47_11585	0.74	-0.3
2,457,758	-		IAI47_11585	0.74	+0.4
2,457,758	-		IAI47_11585	0.74	-1.8
2,457,852	+		IAI47_11585	0.83	+2.4
2,457,944	-				-0.5
2,458,010	+				+1.1
2,458,010	+				+0.8
2,458,011	-				-0.6
2,458,031	+				+0.3
2,458,031	+				+1.5
2,458,031	+				+0.7
2,458,031	+				-1.6
2,458,031	+				-0.1
2,458,032	-				-0.1
2,458,032	-				+1.1
2,458,032	-				-0.9
2,458,117	+				+0.4
2,458,117	+				-0.2
2,458,117	+				+0.5
2,458,118	-				+0.4
2,458,118	-				-0.8
2,458,118	-				+0.5
2,458,118	-				+2.3
2,458,151	+				+0.5
2,458,152	-				-1.6
2,458,279	+		IAI47_11590	0.13	-1.9
2,458,280	-		IAI47_11590	0.13	+0.2
2,458,331	-		IAI47_11590	0.16	-1.3
2,458,335	+		IAI47_11590	0.16	-2.1
2,458,335	+		IAI47_11590	0.16	+0.0
2,458,401	+		IAI47_11590	0.20	-0.5
2,458,401	+		IAI47_11590	0.20	+1.3
2,458,401	+		IAI47_11590	0.20	+1.6
2,458,401	+		IAI47_11590	0.20	+0.2
2,458,401	+		IAI47_11590	0.20	-0.3
2,458,402	-		IAI47_11590	0.20	-1.6
2,458,402	-		IAI47_11590	0.20	-0.0
2,458,402	-		IAI47_11590	0.20	+0.5
2,458,570	+		IAI47_11590	0.29	+2.1
2,458,570	+		IAI47_11590	0.29	-0.5
2,458,571	-		IAI47_11590	0.29	-1.2
2,458,571	-		IAI47_11590	0.29	+0.2
2,458,571	-		IAI47_11590	0.29	+2.1
2,458,571	-		IAI47_11590	0.29	+1.0
2,458,571	-		IAI47_11590	0.29	+0.4
2,458,593	+		IAI47_11590	0.30	-0.8
2,458,593	+		IAI47_11590	0.30	+0.4
2,458,594	-		IAI47_11590	0.30	-0.4
2,458,594	-		IAI47_11590	0.30	-0.5
2,458,663	-		IAI47_11590	0.34	-0.9
2,458,731	+		IAI47_11590	0.38	+4.1
2,458,731	+		IAI47_11590	0.38	-0.8
2,458,731	+		IAI47_11590	0.38	-1.1
2,458,731	+		IAI47_11590	0.38	+2.9
2,458,732	-		IAI47_11590	0.38	+1.6
2,458,741	-		IAI47_11590	0.38	-1.0
2,458,741	-		IAI47_11590	0.38	+0.4
2,458,741	-		IAI47_11590	0.38	-0.3
2,458,784	+		IAI47_11590	0.40	-2.2
2,458,809	-		IAI47_11590	0.42	+0.5
2,458,809	-		IAI47_11590	0.42	-0.5
2,458,845	+		IAI47_11590	0.44	+2.0
2,458,845	+		IAI47_11590	0.44	+1.7
2,458,865	-		IAI47_11590	0.45	-1.9
2,458,881	+		IAI47_11590	0.46	+1.7
2,458,881	+		IAI47_11590	0.46	+2.4
2,458,881	+		IAI47_11590	0.46	+0.6
2,458,882	-		IAI47_11590	0.46	-0.6
2,458,882	-		IAI47_11590	0.46	-1.1
2,458,936	+		IAI47_11590	0.49	-2.3
2,458,937	-		IAI47_11590	0.49	+1.1
2,459,020	+		IAI47_11590	0.53	-0.3
2,459,020	+		IAI47_11590	0.53	-1.4
2,459,020	+		IAI47_11590	0.53	+1.2
2,459,020	+		IAI47_11590	0.53	+1.9
2,459,021	-		IAI47_11590	0.53	-0.5