Strain Fitness in Pantoea sp. MT58 around IAI47_10775

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,275,586	+		IAI47_10765	0.70	-1.4
2,275,587	-		IAI47_10765	0.70	-1.7
2,275,587	-		IAI47_10765	0.70	+1.1
2,275,587	-		IAI47_10765	0.70	+0.6
2,275,587	-		IAI47_10765	0.70	-0.9
2,275,612	+		IAI47_10765	0.72	-2.5
2,275,613	-		IAI47_10765	0.72	+0.1
2,275,613	-		IAI47_10765	0.72	+2.5
2,275,619	+		IAI47_10765	0.73	-0.2
2,275,661	+		IAI47_10765	0.77	-1.4
2,275,661	+		IAI47_10765	0.77	+1.8
2,275,662	-		IAI47_10765	0.77	-3.0
2,275,662	-		IAI47_10765	0.77	+0.1
2,275,662	-		IAI47_10765	0.77	-1.1
2,275,727	+		IAI47_10765	0.83	-0.6
2,275,727	+		IAI47_10765	0.83	+2.4
2,275,727	+		IAI47_10765	0.83	-2.2
2,275,727	+		IAI47_10765	0.83	-0.5
2,275,727	+		IAI47_10765	0.83	+0.6
2,275,728	-		IAI47_10765	0.83	+1.3
2,275,728	-		IAI47_10765	0.83	-1.1
2,275,728	-		IAI47_10765	0.83	-0.2
2,275,796	+		IAI47_10765	0.89	+0.2
2,275,796	+		IAI47_10765	0.89	-0.3
2,275,797	-		IAI47_10765	0.89	+1.6
2,275,797	-		IAI47_10765	0.89	+0.7
2,275,797	-		IAI47_10765	0.89	-0.5
2,275,797	-		IAI47_10765	0.89	-0.2
2,275,797	-		IAI47_10765	0.89	-0.1
2,275,800	+		IAI47_10765	0.89	+2.4
2,275,800	+		IAI47_10765	0.89	+0.3
2,275,800	+		IAI47_10765	0.89	+1.4
2,275,800	+		IAI47_10765	0.89	+0.6
2,275,800	+		IAI47_10765	0.89	-1.3
2,275,800	+		IAI47_10765	0.89	-1.0
2,275,800	+		IAI47_10765	0.89	-0.1
2,275,800	+		IAI47_10765	0.89	+0.5
2,275,800	+		IAI47_10765	0.89	+0.3
2,275,800	+		IAI47_10765	0.89	-0.3
2,275,800	+		IAI47_10765	0.89	+2.1
2,275,800	+		IAI47_10765	0.89	+0.9
2,275,800	+		IAI47_10765	0.89	+0.4
2,275,800	+		IAI47_10765	0.89	-0.7
2,275,801	-		IAI47_10765	0.90	+0.4
2,275,801	-		IAI47_10765	0.90	-1.7
2,275,801	-		IAI47_10765	0.90	-0.4
2,275,801	-		IAI47_10765	0.90	+1.6
2,275,801	-		IAI47_10765	0.90	+1.5
2,275,801	-		IAI47_10765	0.90	-1.6
2,275,801	-		IAI47_10765	0.90	+3.5
2,275,801	-		IAI47_10765	0.90	+5.5
2,275,801	-		IAI47_10765	0.90	-0.2
2,275,801	-		IAI47_10765	0.90	-1.9
2,275,804	+		IAI47_10765	0.90	+0.6
2,275,804	+		IAI47_10765	0.90	-1.7
2,275,804	+		IAI47_10765	0.90	+0.8
2,275,871	+				-0.7
2,275,872	-				-0.3
2,275,892	+				-1.4
2,275,892	+				+1.3
2,275,892	+				-0.8
2,275,892	+				-0.5
2,275,893	-				+1.8
2,275,893	-				+0.0
2,275,893	-				-0.4
2,275,893	-				+2.7
2,275,894	+				-0.4
2,275,894	+				-0.4
2,275,913	+				+1.6
2,275,913	+				-0.4
2,275,913	+				+0.1
2,275,913	+				+0.9
2,275,914	-				-0.2
2,275,956	-				+0.2
2,275,956	-				+0.6
2,275,978	+				+1.7
2,275,978	+				+3.2
2,275,979	-				-0.9
2,275,979	-				+2.6
2,275,980	+				-0.0
2,275,980	+				-0.3
2,275,980	+				-1.2
2,275,980	+				-1.1
2,275,980	+				-0.3
2,275,980	+				-0.1
2,275,980	+				+1.8
2,275,980	+				+2.6
2,275,980	+				+2.8
2,275,980	+				-0.2
2,275,980	+				+2.9
2,275,981	-				-3.2
2,275,981	-				-1.4
2,275,981	-				-0.2
2,275,981	-				-0.5
2,275,981	-				-0.5
2,275,981	-				+0.8
2,275,981	-				-0.2
2,275,981	-				+0.4
2,275,981	-				+0.5
2,275,981	-				+0.4
2,275,981	-				-0.7
2,275,981	-				+2.3
2,275,981	-				+1.6
2,275,985	-				+1.6
2,276,019	-				-1.8
2,276,019	-				-1.4
2,276,019	-				-1.3
2,276,031	+				-0.4
2,276,032	-				-1.3
2,276,040	-				+0.9
2,276,046	+				+0.3
2,276,046	+				+1.3
2,276,046	+				+2.7
2,276,047	-				+0.7
2,276,047	-				+1.1
2,276,089	+		IAI47_10770	0.14	+0.9
2,276,090	-		IAI47_10770	0.14	-0.2
2,276,090	-		IAI47_10770	0.14	-0.4
2,276,090	-		IAI47_10770	0.14	-1.4
2,276,140	+		IAI47_10770	0.26	-0.7
2,276,140	+		IAI47_10770	0.26	+1.6
2,276,140	+		IAI47_10770	0.26	+1.1
2,276,140	+		IAI47_10770	0.26	+1.8
2,276,141	-		IAI47_10770	0.27	+1.6
2,276,141	-		IAI47_10770	0.27	-0.3
2,276,142	+		IAI47_10770	0.27	-1.6
2,276,142	+		IAI47_10770	0.27	+0.4
2,276,142	+		IAI47_10770	0.27	-0.5
2,276,142	+		IAI47_10770	0.27	+0.7
2,276,142	+		IAI47_10770	0.27	+0.1
2,276,142	+		IAI47_10770	0.27	+0.1
2,276,142	+		IAI47_10770	0.27	+0.3
2,276,142	+		IAI47_10770	0.27	+0.8
2,276,142	+		IAI47_10770	0.27	+1.1
2,276,142	+		IAI47_10770	0.27	+0.5
2,276,143	-		IAI47_10770	0.27	+1.4
2,276,143	-		IAI47_10770	0.27	-0.9
2,276,143	-		IAI47_10770	0.27	+2.2
2,276,143	-		IAI47_10770	0.27	+0.3
2,276,143	-		IAI47_10770	0.27	+0.2
2,276,146	+		IAI47_10770	0.28	-0.5
2,276,146	+		IAI47_10770	0.28	+1.6
2,276,146	+		IAI47_10770	0.28	-2.6
2,276,147	-		IAI47_10770	0.28	+0.6
2,276,147	-		IAI47_10770	0.28	+0.4
2,276,147	-		IAI47_10770	0.28	+1.1
2,276,147	-		IAI47_10770	0.28	-0.7
2,276,148	+		IAI47_10770	0.28	+0.1
2,276,149	-		IAI47_10770	0.29	-0.1
2,276,149	-		IAI47_10770	0.29	-0.8
2,276,168	-		IAI47_10770	0.33	-0.5
2,276,206	+		IAI47_10770	0.43	+1.1
2,276,206	+		IAI47_10770	0.43	+1.4
2,276,206	+		IAI47_10770	0.43	-0.3
2,276,206	+		IAI47_10770	0.43	+2.3
2,276,206	+		IAI47_10770	0.43	+1.0
2,276,207	-		IAI47_10770	0.43	+0.1
2,276,207	-		IAI47_10770	0.43	-0.5
2,276,207	-		IAI47_10770	0.43	-0.9
2,276,207	-		IAI47_10770	0.43	-1.0
2,276,208	+		IAI47_10770	0.43	+1.6
2,276,208	+		IAI47_10770	0.43	+0.7
2,276,209	-		IAI47_10770	0.43	+0.3
2,276,209	-		IAI47_10770	0.43	-0.4
2,276,223	+		IAI47_10770	0.47	+2.4
2,276,223	+		IAI47_10770	0.47	-1.5
2,276,224	-		IAI47_10770	0.47	+1.9
2,276,224	-		IAI47_10770	0.47	+2.6
2,276,224	-		IAI47_10770	0.47	-2.1
2,276,224	-		IAI47_10770	0.47	+0.0
2,276,224	-		IAI47_10770	0.47	-0.4
2,276,227	+		IAI47_10770	0.48	-0.7
2,276,227	+		IAI47_10770	0.48	+1.5
2,276,227	+		IAI47_10770	0.48	-0.1
2,276,227	+		IAI47_10770	0.48	+2.1
2,276,227	+		IAI47_10770	0.48	-1.6
2,276,227	+		IAI47_10770	0.48	-0.6
2,276,227	+		IAI47_10770	0.48	+1.6
2,276,227	+		IAI47_10770	0.48	-0.5
2,276,228	-		IAI47_10770	0.48	+3.2
2,276,228	-		IAI47_10770	0.48	+1.6
2,276,228	-		IAI47_10770	0.48	+3.4
2,276,228	-		IAI47_10770	0.48	+0.5
2,276,228	-		IAI47_10770	0.48	-2.5
2,276,228	-		IAI47_10770	0.48	+2.1
2,276,228	-		IAI47_10770	0.48	-1.9
2,276,245	+		IAI47_10770	0.52	-0.2
2,276,246	-		IAI47_10770	0.52	+0.6
2,276,302	-		IAI47_10770	0.66	-0.5
2,276,352	+		IAI47_10770	0.78	+2.1
2,276,352	+		IAI47_10770	0.78	-1.1
2,276,352	+		IAI47_10770	0.78	-1.3
2,276,353	-		IAI47_10770	0.79	-0.1
2,276,358	+				+1.9
2,276,358	+		IAI47_10770	0.80	+0.6
2,276,358	+		IAI47_10770	0.80	+0.6
2,276,358	+		IAI47_10770	0.80	-0.7
2,276,358	+		IAI47_10770	0.80	-1.1
2,276,437	+				+0.8
2,276,437	+				-0.2
2,276,438	-				+1.8
2,276,525	-				+1.3
2,276,525	-				-2.1
2,276,527	+				-0.8
2,276,528	-				-0.9
2,276,528	-				+0.1
2,276,528	-				-0.9
2,276,580	+				-0.7
2,276,611	+				-0.2
2,276,611	+				-0.7
2,276,612	-				-0.2
2,276,836	+		IAI47_10775	0.41	-0.5
2,276,836	+		IAI47_10775	0.41	-1.2
2,276,837	-		IAI47_10775	0.41	-1.2
2,276,837	-		IAI47_10775	0.41	+1.6
2,276,880	+		IAI47_10775	0.48	+0.6
2,276,907	+		IAI47_10775	0.52	-1.2
2,276,907	+		IAI47_10775	0.52	-0.5
2,276,908	-		IAI47_10775	0.52	-1.7
2,276,943	+		IAI47_10775	0.57	-0.9
2,276,943	+		IAI47_10775	0.57	-1.3
2,276,943	+		IAI47_10775	0.57	-0.2
2,276,943	+		IAI47_10775	0.57	-2.2
2,276,944	-		IAI47_10775	0.57	+0.3
2,276,944	-		IAI47_10775	0.57	-1.8
2,276,944	-		IAI47_10775	0.57	-0.2
2,276,944	-		IAI47_10775	0.57	-1.4
2,276,944	-		IAI47_10775	0.57	+0.3
2,276,944	-		IAI47_10775	0.57	-0.6
2,276,944	-		IAI47_10775	0.57	+0.2
2,276,944	-		IAI47_10775	0.57	+2.6
2,277,064	-		IAI47_10775	0.75	+0.6
2,277,064	-		IAI47_10775	0.75	+0.2
2,277,064	-		IAI47_10775	0.75	+0.1
2,277,112	+		IAI47_10775	0.83	-0.8
2,277,170	+				+0.2
2,277,170	+				-1.1
2,277,171	-				-0.5
2,277,226	+				-0.6
2,277,227	-				-0.1
2,277,273	+				+1.9
2,277,618	-				-0.2
2,277,641	-				+0.1
2,277,646	-				-0.9
2,277,693	+				+2.2
2,277,693	+				+0.7
2,277,694	-				+1.9
2,277,694	-				+0.4
2,277,694	-				+3.1
2,277,695	+				-0.5
2,277,695	+				+1.6
2,277,696	-				-1.9
2,277,696	-				+0.6
2,277,710	+				+0.5
2,277,711	-				+0.8
2,277,711	-				+0.3
2,277,711	-				-0.7
2,277,744	-				+0.5
2,277,744	-				+0.5
2,277,774	+				-2.4
2,277,789	+				-0.4
2,277,789	+				-0.6
2,277,789	+				-0.1
2,277,790	-				+0.5
2,277,790	-				-2.0
2,277,791	+				-1.4
2,277,791	+				+0.8
2,277,792	-				-1.0
2,277,792	-				+0.1
2,277,842	+				-0.4
2,277,842	+				-1.1
2,277,845	+				-0.8
2,277,846	-				-1.6
2,277,846	-				+0.4
2,277,859	-				-0.5
2,277,859	-				-1.6
2,277,867	+				-0.3
2,277,881	+				+0.3
2,277,881	+				-0.4
2,277,882	-				-0.3
2,277,938	+				+0.3
2,277,955	+				-0.7
2,277,955	+				+0.6
2,277,955	+				+1.3
2,277,955	+				-0.7
2,277,955	+				+0.1
2,277,955	+				+1.7
2,277,956	-				+1.6
2,277,956	-				+0.6
2,277,956	-				+1.4
2,277,956	-				+0.1
2,277,956	-				+2.0
2,277,956	-				-1.4
2,277,956	-				-0.3
2,277,959	+				+0.8
2,277,960	-				-2.1
2,277,960	-				+2.0
2,277,960	-				-0.5
2,277,960	-				-2.7
2,277,960	-				-1.7
2,277,971	+				+0.1
2,277,971	+				+0.6
2,277,972	-				-1.4
2,277,972	-				-0.2
2,277,979	+				+1.1
2,277,979	+				+1.2
2,277,986	+				+2.0
2,277,986	+				+0.3
2,277,986	+				-0.4
2,278,064	+				+1.0
2,278,064	+				-0.5
2,278,065	-				+0.4
2,278,070	+				+1.2
2,278,070	+				-0.9
2,278,070	+				+2.9
2,278,070	+				-0.1
2,278,071	-				-1.2
2,278,220	+		IAI47_10785	0.28	+1.3
2,278,220	+		IAI47_10785	0.28	+0.9
2,278,220	+		IAI47_10785	0.28	-0.2
2,278,221	-		IAI47_10785	0.29	+4.0
2,278,221	-		IAI47_10785	0.29	+1.5
2,278,221	-		IAI47_10785	0.29	+0.4