Strain Fitness in Pantoea sp. MT58 around IAI47_10735

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,268,630	-		IAI47_10725	0.61	+3.2
2,268,640	+		IAI47_10725	0.65	+0.3
2,268,641	-		IAI47_10725	0.66	+1.3
2,268,641	-		IAI47_10725	0.66	-0.3
2,268,720	-				-1.2
2,268,726	+				-0.4
2,268,783	-				+0.5
2,268,808	+				+0.6
2,268,808	+				+0.4
2,268,809	+				-0.9
2,268,809	-				+2.3
2,268,809	-				+0.7
2,268,809	-				+0.3
2,268,809	-				+0.1
2,268,811	+				-0.4
2,268,811	+				-0.1
2,268,811	+				-0.5
2,268,811	+				+0.3
2,268,811	+				+1.5
2,268,811	+				+0.7
2,268,812	-				-1.5
2,268,812	-				-0.1
2,268,812	-				+2.1
2,268,812	-				-0.9
2,268,812	-				-0.7
2,268,812	-				+0.8
2,268,812	-				-1.7
2,268,812	-				+1.1
2,268,864	+		IAI47_10730	0.16	+2.2
2,268,865	-		IAI47_10730	0.16	+0.1
2,268,865	-		IAI47_10730	0.16	+0.2
2,269,103	+		IAI47_10730	0.44	+1.1
2,269,104	-		IAI47_10730	0.44	+0.8
2,269,104	-		IAI47_10730	0.44	+1.6
2,269,131	+		IAI47_10730	0.47	-1.3
2,269,132	-		IAI47_10730	0.47	+0.5
2,269,132	-		IAI47_10730	0.47	+0.8
2,269,215	+		IAI47_10730	0.57	+1.3
2,269,215	+		IAI47_10730	0.57	+2.1
2,269,215	+		IAI47_10730	0.57	-0.5
2,269,216	-		IAI47_10730	0.57	+0.3
2,269,240	+		IAI47_10730	0.60	+0.1
2,269,240	+		IAI47_10730	0.60	-0.3
2,269,240	+		IAI47_10730	0.60	+2.6
2,269,240	+		IAI47_10730	0.60	-0.7
2,269,240	+		IAI47_10730	0.60	+0.6
2,269,240	+		IAI47_10730	0.60	-0.3
2,269,240	+		IAI47_10730	0.60	+1.8
2,269,241	-		IAI47_10730	0.60	+3.1
2,269,241	-		IAI47_10730	0.60	+0.6
2,269,241	-		IAI47_10730	0.60	+2.1
2,269,241	-		IAI47_10730	0.60	+1.3
2,269,241	-		IAI47_10730	0.60	+1.1
2,269,241	-		IAI47_10730	0.60	-1.8
2,269,288	+		IAI47_10730	0.65	+1.5
2,269,288	+		IAI47_10730	0.65	+0.3
2,269,288	+		IAI47_10730	0.65	+0.5
2,269,289	-		IAI47_10730	0.66	-0.4
2,269,291	+		IAI47_10730	0.66	+2.6
2,269,291	+		IAI47_10730	0.66	+0.1
2,269,291	+		IAI47_10730	0.66	-0.7
2,269,291	+		IAI47_10730	0.66	-1.9
2,269,291	+		IAI47_10730	0.66	+0.6
2,269,291	+		IAI47_10730	0.66	-1.4
2,269,292	-		IAI47_10730	0.66	-2.6
2,269,292	-		IAI47_10730	0.66	+0.1
2,269,292	-		IAI47_10730	0.66	-0.4
2,269,292	-		IAI47_10730	0.66	+0.1
2,269,329	+		IAI47_10730	0.70	+0.5
2,269,329	+				-0.3
2,269,330	-		IAI47_10730	0.70	+1.0
2,269,330	-		IAI47_10730	0.70	+0.9
2,269,363	+		IAI47_10730	0.74	-1.3
2,269,363	+		IAI47_10730	0.74	-0.2
2,269,363	+		IAI47_10730	0.74	+0.9
2,269,363	+		IAI47_10730	0.74	-0.0
2,269,371	+		IAI47_10730	0.75	-0.5
2,269,371	+		IAI47_10730	0.75	+2.3
2,269,371	+		IAI47_10730	0.75	+1.1
2,269,371	+		IAI47_10730	0.75	+1.6
2,269,371	+		IAI47_10730	0.75	-1.8
2,269,371	+		IAI47_10730	0.75	-0.4
2,269,372	-		IAI47_10730	0.75	+1.2
2,269,372	-		IAI47_10730	0.75	+0.4
2,269,372	-		IAI47_10730	0.75	+0.4
2,269,372	-		IAI47_10730	0.75	+1.6
2,269,372	-		IAI47_10730	0.75	-1.1
2,269,372	-		IAI47_10730	0.75	-0.4
2,269,394	+		IAI47_10730	0.78	+0.2
2,269,394	+		IAI47_10730	0.78	+0.7
2,269,395	-		IAI47_10730	0.78	-0.6
2,269,395	-		IAI47_10730	0.78	-0.3
2,269,395	-		IAI47_10730	0.78	-0.2
2,269,417	+		IAI47_10730	0.80	-0.5
2,269,417	+		IAI47_10730	0.80	-0.6
2,269,417	+		IAI47_10730	0.80	-0.4
2,269,417	+		IAI47_10730	0.80	+0.6
2,269,418	-		IAI47_10730	0.81	+3.9
2,269,418	-		IAI47_10730	0.81	-1.3
2,269,418	-		IAI47_10730	0.81	+1.9
2,269,418	-		IAI47_10730	0.81	-1.5
2,269,418	-		IAI47_10730	0.81	-0.2
2,269,623	-				+0.6
2,269,654	+				+1.1
2,269,654	+				-1.7
2,269,654	+				+1.6
2,269,655	-				-1.4
2,269,659	-				+1.7
2,269,695	+				-1.3
2,269,868	+		IAI47_10735	0.14	+0.1
2,269,868	+		IAI47_10735	0.14	-0.2
2,269,869	-		IAI47_10735	0.14	-0.7
2,269,869	-		IAI47_10735	0.14	-0.7
2,269,869	-		IAI47_10735	0.14	+1.0
2,269,921	-		IAI47_10735	0.17	-0.7
2,269,959	+		IAI47_10735	0.19	+0.4
2,269,959	+		IAI47_10735	0.19	-2.2
2,269,994	+		IAI47_10735	0.21	-0.0
2,269,994	+		IAI47_10735	0.21	-1.4
2,269,994	+		IAI47_10735	0.21	-1.6
2,269,994	+		IAI47_10735	0.21	-0.8
2,269,995	-		IAI47_10735	0.21	+1.0
2,269,995	-		IAI47_10735	0.21	+0.3
2,269,995	-		IAI47_10735	0.21	+1.3
2,270,003	+		IAI47_10735	0.21	+0.6
2,270,096	+		IAI47_10735	0.26	+0.8
2,270,097	-		IAI47_10735	0.26	-0.6
2,270,097	-		IAI47_10735	0.26	+1.1
2,270,120	+		IAI47_10735	0.27	-0.7
2,270,120	+		IAI47_10735	0.27	+0.8
2,270,120	+		IAI47_10735	0.27	+0.5
2,270,121	-		IAI47_10735	0.27	+0.7
2,270,167	+		IAI47_10735	0.29	+2.2
2,270,167	+		IAI47_10735	0.29	-0.3
2,270,168	-		IAI47_10735	0.29	+2.6
2,270,168	-		IAI47_10735	0.29	+0.1
2,270,168	-		IAI47_10735	0.29	+0.2
2,270,192	+		IAI47_10735	0.31	-1.9
2,270,192	+		IAI47_10735	0.31	-0.8
2,270,275	-		IAI47_10735	0.35	-0.8
2,270,307	+		IAI47_10735	0.36	+1.1
2,270,307	+		IAI47_10735	0.36	+0.9
2,270,307	+		IAI47_10735	0.36	+0.8
2,270,307	+		IAI47_10735	0.36	+0.6
2,270,307	+		IAI47_10735	0.36	+0.6
2,270,308	-		IAI47_10735	0.36	+0.5
2,270,308	-		IAI47_10735	0.36	+0.6
2,270,308	-		IAI47_10735	0.36	-0.8
2,270,308	-		IAI47_10735	0.36	+1.2
2,270,308	-		IAI47_10735	0.36	-0.4
2,270,308	-		IAI47_10735	0.36	+0.3
2,270,447	+		IAI47_10735	0.43	+1.4
2,270,451	+		IAI47_10735	0.43	-0.2
2,270,451	+		IAI47_10735	0.43	+3.5
2,270,451	+		IAI47_10735	0.43	-0.3
2,270,452	-		IAI47_10735	0.44	-1.4
2,270,536	-		IAI47_10735	0.48	+0.6
2,270,551	-		IAI47_10735	0.48	-0.5
2,270,560	+		IAI47_10735	0.49	-0.8
2,270,720	+		IAI47_10735	0.57	-0.0
2,270,721	-		IAI47_10735	0.57	-0.4
2,270,763	-		IAI47_10735	0.59	-0.7
2,270,778	+		IAI47_10735	0.60	-2.0
2,270,906	-		IAI47_10735	0.66	-0.2
2,270,935	+		IAI47_10735	0.68	-0.7
2,270,936	-		IAI47_10735	0.68	+1.1
2,270,936	-		IAI47_10735	0.68	-0.9
2,270,996	+		IAI47_10735	0.71	+2.6
2,270,996	+		IAI47_10735	0.71	-0.9
2,270,996	+		IAI47_10735	0.71	+1.9
2,270,996	+		IAI47_10735	0.71	-1.0
2,270,996	+		IAI47_10735	0.71	-0.2
2,271,039	+		IAI47_10735	0.73	-0.9
2,271,039	+		IAI47_10735	0.73	+0.3
2,271,040	-		IAI47_10735	0.73	-0.4
2,271,059	+		IAI47_10735	0.74	+1.8
2,271,301	+		IAI47_10735	0.86	-1.6
2,271,302	-		IAI47_10735	0.86	-1.8
2,271,302	-		IAI47_10735	0.86	+0.4
2,271,302	-		IAI47_10735	0.86	+1.9
2,271,302	-		IAI47_10735	0.86	-0.5
2,271,307	+		IAI47_10735	0.86	-0.5
2,271,308	-		IAI47_10735	0.86	-0.6
2,271,323	+		IAI47_10735	0.87	-1.4
2,271,323	+		IAI47_10735	0.87	+0.3
2,271,323	+		IAI47_10735	0.87	+1.6
2,271,323	+		IAI47_10735	0.87	-1.5
2,271,323	+		IAI47_10735	0.87	+1.8
2,271,323	+		IAI47_10735	0.87	-0.4
2,271,323	+		IAI47_10735	0.87	+0.1
2,271,323	+		IAI47_10735	0.87	-1.0
2,271,323	+		IAI47_10735	0.87	-1.2
2,271,323	+		IAI47_10735	0.87	+1.6
2,271,323	+		IAI47_10735	0.87	+0.1
2,271,324	-		IAI47_10735	0.87	-1.5
2,271,324	-		IAI47_10735	0.87	+0.5
2,271,324	-		IAI47_10735	0.87	+1.8
2,271,324	-		IAI47_10735	0.87	+3.2
2,271,324	-		IAI47_10735	0.87	+0.0
2,271,324	-		IAI47_10735	0.87	-0.9
2,271,324	-		IAI47_10735	0.87	+0.6
2,271,324	-		IAI47_10735	0.87	-0.4
2,271,324	-		IAI47_10735	0.87	+0.9
2,271,324	-		IAI47_10735	0.87	+0.9
2,271,324	-		IAI47_10735	0.87	+1.5
2,271,383	+				+0.6
2,271,454	+				-0.3
2,271,455	-				+1.6
2,271,455	-				+1.1
2,271,455	-				+2.1
2,271,455	-				-0.2
2,271,473	+				+1.6
2,271,473	+				-0.2
2,271,473	+				+2.3
2,271,474	-				+2.1
2,271,474	-				-1.1
2,271,474	-				+0.3
2,271,474	-				-1.2
2,271,474	-				+0.5
2,271,474	-				-0.2
2,271,474	-				-1.3
2,271,474	-				-0.1
2,271,484	+				-1.4
2,271,485	-				+1.9
2,271,485	-				-0.3
2,271,527	+				+1.6
2,271,527	+				+0.4
2,271,527	+				+0.3
2,271,527	+				+0.3
2,271,527	+				-1.4
2,271,528	-				-2.1
2,271,528	-				-0.4
2,271,528	-				+0.4
2,271,528	-				+2.9
2,271,583	+				+0.2
2,271,592	+				+1.2
2,271,592	+				-0.8
2,271,592	+				+0.6
2,271,592	+				-1.9
2,271,593	-				+0.1
2,271,593	-				+2.3
2,271,593	-				+1.6
2,271,593	-				-0.3
2,271,662	+		IAI47_10740	0.17	-0.1
2,271,743	+		IAI47_10740	0.34	+0.2
2,271,793	+		IAI47_10740	0.45	-1.4
2,271,793	+		IAI47_10740	0.45	+0.2
2,271,793	+		IAI47_10740	0.45	+0.5
2,271,793	+		IAI47_10740	0.45	+0.4
2,271,793	+		IAI47_10740	0.45	+0.8
2,271,794	-		IAI47_10740	0.45	-0.7
2,271,794	-		IAI47_10740	0.45	+0.3
2,271,794	-		IAI47_10740	0.45	+0.0
2,271,794	-		IAI47_10740	0.45	+0.6
2,271,794	-		IAI47_10740	0.45	+1.8
2,271,794	-		IAI47_10740	0.45	+0.2
2,271,794	-		IAI47_10740	0.45	-0.6
2,271,804	-		IAI47_10740	0.47	+1.6
2,271,867	-		IAI47_10740	0.61	-1.4
2,271,867	-		IAI47_10740	0.61	-0.1
2,271,938	+		IAI47_10740	0.76	-0.2
2,271,939	-		IAI47_10740	0.76	+0.7
2,271,939	-		IAI47_10740	0.76	+0.1
2,271,939	-		IAI47_10740	0.76	-1.4
2,271,986	+		IAI47_10740	0.86	+0.1
2,271,986	+		IAI47_10740	0.86	-0.3
2,271,986	+		IAI47_10740	0.86	-0.7
2,271,987	-		IAI47_10740	0.87	+1.5
2,271,987	-		IAI47_10740	0.87	-0.9
2,271,999	-		IAI47_10740	0.89	-0.4
2,272,023	+				+0.1
2,272,023	+				+2.1
2,272,023	+				-1.7
2,272,023	+				+1.6
2,272,023	+				-1.6
2,272,023	+				-0.7
2,272,023	+				-0.1
2,272,024	-				-0.1
2,272,024	-				+0.6
2,272,024	-				+0.8
2,272,024	-				+0.4
2,272,024	-				+0.8
2,272,024	-				+1.2
2,272,029	+				+1.1
2,272,029	+				+0.6
2,272,029	+				-0.2
2,272,030	-				-1.4
2,272,030	-				+2.1
2,272,030	-				-0.2
2,272,030	-				+0.2
2,272,098	-				+0.3
2,272,098	-				-0.3
2,272,120	+				+1.2
2,272,120	+				-0.1
2,272,120	+				+1.0
2,272,120	+				-0.6
2,272,121	-				+0.4
2,272,121	-				+0.9
2,272,121	-				+1.1
2,272,121	-				-2.4
2,272,162	+				+1.2
2,272,163	-				-1.7
2,272,163	-				-0.4
2,272,186	+				-0.5
2,272,187	-				-0.7
2,272,199	+				+0.5
2,272,228	-				+1.8
2,272,288	-		IAI47_10745	0.21	+1.5
2,272,322	+		IAI47_10745	0.27	-0.0
2,272,349	+		IAI47_10745	0.33	-0.2
2,272,349	+		IAI47_10745	0.33	+1.5
2,272,350	-		IAI47_10745	0.33	+0.8
2,272,385	+		IAI47_10745	0.39	-0.2
2,272,386	-		IAI47_10745	0.40	+0.6
2,272,488	+		IAI47_10745	0.59	+0.8
2,272,488	+		IAI47_10745	0.59	+0.8
2,272,489	-		IAI47_10745	0.60	+1.0
2,272,489	-		IAI47_10745	0.60	-1.2
2,272,556	+		IAI47_10745	0.72	-0.4
2,272,556	+		IAI47_10745	0.72	+0.6
2,272,556	+		IAI47_10745	0.72	+1.1
2,272,556	+		IAI47_10745	0.72	-0.6
2,272,556	+		IAI47_10745	0.72	+0.1
2,272,557	-		IAI47_10745	0.73	+0.2
2,272,557	-		IAI47_10745	0.73	+0.7
2,272,557	-		IAI47_10745	0.73	+0.8
2,272,557	-		IAI47_10745	0.73	+1.6
2,272,557	-		IAI47_10745	0.73	+0.2
2,272,557	-		IAI47_10745	0.73	+1.1