Strain Fitness in Pantoea sp. MT58 around IAI47_10730

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,267,739	+		IAI47_10715	0.75	+0.5
2,267,899	-				+0.1
2,267,927	-				-0.4
2,268,017	+		IAI47_10720	0.27	-2.4
2,268,064	+		IAI47_10720	0.38	-2.3
2,268,108	-		IAI47_10720	0.48	-0.5
2,268,108	-		IAI47_10720	0.48	-0.1
2,268,109	+		IAI47_10720	0.48	-1.0
2,268,109	+		IAI47_10720	0.48	+1.0
2,268,109	+		IAI47_10720	0.48	-1.4
2,268,109	+		IAI47_10720	0.48	+0.7
2,268,109	+		IAI47_10720	0.48	+1.1
2,268,109	+		IAI47_10720	0.48	-1.3
2,268,109	+		IAI47_10720	0.48	-0.5
2,268,110	-		IAI47_10720	0.49	-1.8
2,268,110	-		IAI47_10720	0.49	-0.3
2,268,110	-		IAI47_10720	0.49	+0.1
2,268,110	-		IAI47_10720	0.49	+1.4
2,268,110	-		IAI47_10720	0.49	-1.0
2,268,110	-		IAI47_10720	0.49	-0.9
2,268,110	-		IAI47_10720	0.49	+0.2
2,268,110	-		IAI47_10720	0.49	-2.4
2,268,110	-		IAI47_10720	0.49	-0.8
2,268,180	-		IAI47_10720	0.65	+0.3
2,268,217	+		IAI47_10720	0.73	+2.1
2,268,217	+		IAI47_10720	0.73	-0.9
2,268,217	+		IAI47_10720	0.73	+0.1
2,268,217	+		IAI47_10720	0.73	+0.1
2,268,217	+		IAI47_10720	0.73	+0.8
2,268,217	+		IAI47_10720	0.73	+0.6
2,268,218	-		IAI47_10720	0.73	-1.0
2,268,218	-		IAI47_10720	0.73	-0.5
2,268,218	-		IAI47_10720	0.73	-0.2
2,268,218	-		IAI47_10720	0.73	+1.1
2,268,218	-		IAI47_10720	0.73	+0.3
2,268,308	+				-1.4
2,268,346	-				-1.7
2,268,348	-				+2.8
2,268,360	-				+0.4
2,268,363	+				-1.3
2,268,363	+				-1.4
2,268,378	+				-1.4
2,268,379	-				-1.1
2,268,379	-				+0.4
2,268,383	+				+0.9
2,268,383	+				-2.3
2,268,384	-				+0.6
2,268,384	-				-0.2
2,268,396	+				-1.7
2,268,397	-				-0.2
2,268,408	+				-1.4
2,268,408	+				-0.1
2,268,408	+				-1.1
2,268,409	-				-1.2
2,268,409	-				-0.2
2,268,409	-				-0.5
2,268,409	-				+0.3
2,268,433	-				-1.2
2,268,479	+				-1.4
2,268,479	+				+1.1
2,268,480	-				+0.7
2,268,480	-				-1.4
2,268,480	-				-0.5
2,268,480	-				-0.6
2,268,480	-				+2.2
2,268,630	-		IAI47_10725	0.61	+3.2
2,268,640	+		IAI47_10725	0.65	+0.3
2,268,641	-		IAI47_10725	0.66	+1.3
2,268,641	-		IAI47_10725	0.66	-0.3
2,268,720	-				-1.2
2,268,726	+				-0.4
2,268,783	-				+0.5
2,268,808	+				+0.6
2,268,808	+				+0.4
2,268,809	+				-0.9
2,268,809	-				+2.3
2,268,809	-				+0.7
2,268,809	-				+0.3
2,268,809	-				+0.1
2,268,811	+				-0.4
2,268,811	+				-0.1
2,268,811	+				-0.5
2,268,811	+				+0.3
2,268,811	+				+1.5
2,268,811	+				+0.7
2,268,812	-				-1.5
2,268,812	-				-0.1
2,268,812	-				+2.1
2,268,812	-				-0.9
2,268,812	-				-0.7
2,268,812	-				+0.8
2,268,812	-				-1.7
2,268,812	-				+1.1
2,268,864	+		IAI47_10730	0.16	+2.2
2,268,865	-		IAI47_10730	0.16	+0.1
2,268,865	-		IAI47_10730	0.16	+0.2
2,269,103	+		IAI47_10730	0.44	+1.1
2,269,104	-		IAI47_10730	0.44	+0.8
2,269,104	-		IAI47_10730	0.44	+1.6
2,269,131	+		IAI47_10730	0.47	-1.3
2,269,132	-		IAI47_10730	0.47	+0.5
2,269,132	-		IAI47_10730	0.47	+0.8
2,269,215	+		IAI47_10730	0.57	+1.3
2,269,215	+		IAI47_10730	0.57	+2.1
2,269,215	+		IAI47_10730	0.57	-0.5
2,269,216	-		IAI47_10730	0.57	+0.3
2,269,240	+		IAI47_10730	0.60	+0.1
2,269,240	+		IAI47_10730	0.60	-0.3
2,269,240	+		IAI47_10730	0.60	+2.6
2,269,240	+		IAI47_10730	0.60	-0.7
2,269,240	+		IAI47_10730	0.60	+0.6
2,269,240	+		IAI47_10730	0.60	-0.3
2,269,240	+		IAI47_10730	0.60	+1.8
2,269,241	-		IAI47_10730	0.60	+3.1
2,269,241	-		IAI47_10730	0.60	+0.6
2,269,241	-		IAI47_10730	0.60	+2.1
2,269,241	-		IAI47_10730	0.60	+1.3
2,269,241	-		IAI47_10730	0.60	+1.1
2,269,241	-		IAI47_10730	0.60	-1.8
2,269,288	+		IAI47_10730	0.65	+1.5
2,269,288	+		IAI47_10730	0.65	+0.3
2,269,288	+		IAI47_10730	0.65	+0.5
2,269,289	-		IAI47_10730	0.66	-0.4
2,269,291	+		IAI47_10730	0.66	+2.6
2,269,291	+		IAI47_10730	0.66	+0.1
2,269,291	+		IAI47_10730	0.66	-0.7
2,269,291	+		IAI47_10730	0.66	-1.9
2,269,291	+		IAI47_10730	0.66	+0.6
2,269,291	+		IAI47_10730	0.66	-1.4
2,269,292	-		IAI47_10730	0.66	-2.6
2,269,292	-		IAI47_10730	0.66	+0.1
2,269,292	-		IAI47_10730	0.66	-0.4
2,269,292	-		IAI47_10730	0.66	+0.1
2,269,329	+		IAI47_10730	0.70	+0.5
2,269,329	+				-0.3
2,269,330	-		IAI47_10730	0.70	+1.0
2,269,330	-		IAI47_10730	0.70	+0.9
2,269,363	+		IAI47_10730	0.74	-1.3
2,269,363	+		IAI47_10730	0.74	-0.2
2,269,363	+		IAI47_10730	0.74	+0.9
2,269,363	+		IAI47_10730	0.74	-0.0
2,269,371	+		IAI47_10730	0.75	-0.5
2,269,371	+		IAI47_10730	0.75	+2.3
2,269,371	+		IAI47_10730	0.75	+1.1
2,269,371	+		IAI47_10730	0.75	+1.6
2,269,371	+		IAI47_10730	0.75	-1.8
2,269,371	+		IAI47_10730	0.75	-0.4
2,269,372	-		IAI47_10730	0.75	+1.2
2,269,372	-		IAI47_10730	0.75	+0.4
2,269,372	-		IAI47_10730	0.75	+0.4
2,269,372	-		IAI47_10730	0.75	+1.6
2,269,372	-		IAI47_10730	0.75	-1.1
2,269,372	-		IAI47_10730	0.75	-0.4
2,269,394	+		IAI47_10730	0.78	+0.2
2,269,394	+		IAI47_10730	0.78	+0.7
2,269,395	-		IAI47_10730	0.78	-0.6
2,269,395	-		IAI47_10730	0.78	-0.3
2,269,395	-		IAI47_10730	0.78	-0.2
2,269,417	+		IAI47_10730	0.80	-0.5
2,269,417	+		IAI47_10730	0.80	-0.6
2,269,417	+		IAI47_10730	0.80	-0.4
2,269,417	+		IAI47_10730	0.80	+0.6
2,269,418	-		IAI47_10730	0.81	+3.9
2,269,418	-		IAI47_10730	0.81	-1.3
2,269,418	-		IAI47_10730	0.81	+1.9
2,269,418	-		IAI47_10730	0.81	-1.5
2,269,418	-		IAI47_10730	0.81	-0.2
2,269,623	-				+0.6
2,269,654	+				+1.1
2,269,654	+				-1.7
2,269,654	+				+1.6
2,269,655	-				-1.4
2,269,659	-				+1.7
2,269,695	+				-1.3
2,269,868	+		IAI47_10735	0.14	+0.1
2,269,868	+		IAI47_10735	0.14	-0.2
2,269,869	-		IAI47_10735	0.14	-0.7
2,269,869	-		IAI47_10735	0.14	-0.7
2,269,869	-		IAI47_10735	0.14	+1.0
2,269,921	-		IAI47_10735	0.17	-0.7
2,269,959	+		IAI47_10735	0.19	+0.4
2,269,959	+		IAI47_10735	0.19	-2.2
2,269,994	+		IAI47_10735	0.21	-0.0
2,269,994	+		IAI47_10735	0.21	-1.4
2,269,994	+		IAI47_10735	0.21	-1.6
2,269,994	+		IAI47_10735	0.21	-0.8
2,269,995	-		IAI47_10735	0.21	+1.0
2,269,995	-		IAI47_10735	0.21	+0.3
2,269,995	-		IAI47_10735	0.21	+1.3
2,270,003	+		IAI47_10735	0.21	+0.6
2,270,096	+		IAI47_10735	0.26	+0.8
2,270,097	-		IAI47_10735	0.26	-0.6
2,270,097	-		IAI47_10735	0.26	+1.1
2,270,120	+		IAI47_10735	0.27	-0.7
2,270,120	+		IAI47_10735	0.27	+0.8
2,270,120	+		IAI47_10735	0.27	+0.5
2,270,121	-		IAI47_10735	0.27	+0.7
2,270,167	+		IAI47_10735	0.29	+2.2
2,270,167	+		IAI47_10735	0.29	-0.3
2,270,168	-		IAI47_10735	0.29	+2.6
2,270,168	-		IAI47_10735	0.29	+0.1
2,270,168	-		IAI47_10735	0.29	+0.2
2,270,192	+		IAI47_10735	0.31	-1.9
2,270,192	+		IAI47_10735	0.31	-0.8
2,270,275	-		IAI47_10735	0.35	-0.8
2,270,307	+		IAI47_10735	0.36	+1.1
2,270,307	+		IAI47_10735	0.36	+0.9
2,270,307	+		IAI47_10735	0.36	+0.8
2,270,307	+		IAI47_10735	0.36	+0.6
2,270,307	+		IAI47_10735	0.36	+0.6
2,270,308	-		IAI47_10735	0.36	+0.5
2,270,308	-		IAI47_10735	0.36	+0.6
2,270,308	-		IAI47_10735	0.36	-0.8
2,270,308	-		IAI47_10735	0.36	+1.2
2,270,308	-		IAI47_10735	0.36	-0.4
2,270,308	-		IAI47_10735	0.36	+0.3
2,270,447	+		IAI47_10735	0.43	+1.4
2,270,451	+		IAI47_10735	0.43	-0.2
2,270,451	+		IAI47_10735	0.43	+3.5
2,270,451	+		IAI47_10735	0.43	-0.3
2,270,452	-		IAI47_10735	0.44	-1.4
2,270,536	-		IAI47_10735	0.48	+0.6
2,270,551	-		IAI47_10735	0.48	-0.5
2,270,560	+		IAI47_10735	0.49	-0.8