Strain Fitness in Pantoea sp. MT58 around IAI47_10585

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,237,755	+				+2.1
2,237,924	+		IAI47_10580	0.16	+0.4
2,237,924	+		IAI47_10580	0.16	+1.9
2,237,925	-		IAI47_10580	0.16	-1.4
2,237,926	+		IAI47_10580	0.16	+0.6
2,237,926	+		IAI47_10580	0.16	+0.8
2,237,926	+		IAI47_10580	0.16	-0.9
2,237,926	+		IAI47_10580	0.16	+1.9
2,237,926	+		IAI47_10580	0.16	-1.2
2,237,926	+		IAI47_10580	0.16	-0.4
2,237,927	-		IAI47_10580	0.16	-0.2
2,237,927	-		IAI47_10580	0.16	-0.8
2,237,927	-		IAI47_10580	0.16	-0.7
2,237,927	-		IAI47_10580	0.16	-1.2
2,237,930	+		IAI47_10580	0.17	+1.1
2,237,931	-		IAI47_10580	0.17	+0.4
2,237,931	-		IAI47_10580	0.17	+0.6
2,237,931	-		IAI47_10580	0.17	-0.4
2,237,931	-		IAI47_10580	0.17	-0.6
2,237,945	+		IAI47_10580	0.19	+1.2
2,237,945	+		IAI47_10580	0.19	+1.3
2,237,991	-		IAI47_10580	0.24	+0.5
2,238,020	+		IAI47_10580	0.27	+0.0
2,238,021	-		IAI47_10580	0.27	-2.1
2,238,053	+		IAI47_10580	0.31	-0.2
2,238,053	+		IAI47_10580	0.31	-0.3
2,238,054	-		IAI47_10580	0.31	-0.9
2,238,101	-		IAI47_10580	0.36	-0.7
2,238,101	-		IAI47_10580	0.36	-1.0
2,238,101	-		IAI47_10580	0.36	-0.2
2,238,137	+		IAI47_10580	0.40	-1.1
2,238,151	+		IAI47_10580	0.42	-0.3
2,238,152	-		IAI47_10580	0.42	-1.6
2,238,163	+		IAI47_10580	0.43	+1.1
2,238,163	+		IAI47_10580	0.43	-0.7
2,238,164	-		IAI47_10580	0.43	+0.1
2,238,164	-		IAI47_10580	0.43	-0.3
2,238,176	+		IAI47_10580	0.45	+2.7
2,238,183	+		IAI47_10580	0.45	+0.1
2,238,184	-		IAI47_10580	0.46	-0.5
2,238,184	-		IAI47_10580	0.46	-1.4
2,238,184	-		IAI47_10580	0.46	-1.2
2,238,189	-		IAI47_10580	0.46	+1.1
2,238,197	+		IAI47_10580	0.47	+2.2
2,238,197	+		IAI47_10580	0.47	-0.2
2,238,198	-		IAI47_10580	0.47	+3.0
2,238,199	+		IAI47_10580	0.47	+0.3
2,238,199	+		IAI47_10580	0.47	-0.3
2,238,199	+		IAI47_10580	0.47	+2.6
2,238,199	+		IAI47_10580	0.47	-0.7
2,238,199	+		IAI47_10580	0.47	+0.3
2,238,200	-		IAI47_10580	0.47	-2.2
2,238,200	-		IAI47_10580	0.47	+1.3
2,238,235	+		IAI47_10580	0.51	-0.8
2,238,235	+		IAI47_10580	0.51	-0.7
2,238,235	+		IAI47_10580	0.51	+2.6
2,238,236	-		IAI47_10580	0.51	-0.2
2,238,238	+		IAI47_10580	0.52	-0.5
2,238,238	+		IAI47_10580	0.52	-0.7
2,238,238	+		IAI47_10580	0.52	+0.8
2,238,238	+		IAI47_10580	0.52	-0.5
2,238,239	-		IAI47_10580	0.52	-0.8
2,238,239	-		IAI47_10580	0.52	+1.6
2,238,242	+		IAI47_10580	0.52	+1.2
2,238,242	+		IAI47_10580	0.52	+0.3
2,238,242	+		IAI47_10580	0.52	-0.7
2,238,243	-		IAI47_10580	0.52	+1.5
2,238,251	-		IAI47_10580	0.53	-1.5
2,238,251	-		IAI47_10580	0.53	-0.9
2,238,263	+		IAI47_10580	0.54	+1.5
2,238,264	-		IAI47_10580	0.55	+0.9
2,238,273	+		IAI47_10580	0.56	+0.2
2,238,273	+		IAI47_10580	0.56	+0.4
2,238,274	-		IAI47_10580	0.56	-0.8
2,238,288	+		IAI47_10580	0.57	-1.9
2,238,404	-		IAI47_10580	0.70	+0.9
2,238,404	-		IAI47_10580	0.70	+0.2
2,238,431	+		IAI47_10580	0.73	-0.6
2,238,431	+		IAI47_10580	0.73	-1.3
2,238,432	-		IAI47_10580	0.74	+0.9
2,238,432	-		IAI47_10580	0.74	-1.5
2,238,432	-		IAI47_10580	0.74	-0.1
2,238,434	+		IAI47_10580	0.74	+1.2
2,238,434	+		IAI47_10580	0.74	-0.8
2,238,435	-		IAI47_10580	0.74	-1.7
2,238,435	-		IAI47_10580	0.74	+0.6
2,238,435	-		IAI47_10580	0.74	+0.4
2,238,461	+		IAI47_10580	0.77	+0.9
2,238,461	+		IAI47_10580	0.77	-1.1
2,238,461	+		IAI47_10580	0.77	-1.1
2,238,461	+		IAI47_10580	0.77	+0.0
2,238,462	-		IAI47_10580	0.77	-0.9
2,238,504	-		IAI47_10580	0.82	+1.3
2,238,504	-		IAI47_10580	0.82	+0.5
2,238,520	+		IAI47_10580	0.84	+0.9
2,238,529	+		IAI47_10580	0.85	+0.1
2,238,599	+				+0.8
2,238,599	+				-0.9
2,238,599	+				-0.7
2,238,599	+				+2.0
2,238,614	+				+0.3
2,238,684	+				-0.4
2,238,707	+				-1.2
2,238,707	+				+0.3
2,238,708	-				-0.4
2,238,708	-				+0.0
2,238,745	-				-1.3
2,238,745	-				-1.1
2,238,745	-				-0.4
2,238,748	-				+1.3
2,238,748	-				-0.6
2,238,748	-				+0.1
2,238,748	-				+2.0
2,238,748	-				-0.3
2,238,748	-				+4.1
2,238,750	-				-0.5
2,238,750	-				+0.3
2,238,750	-				+2.0
2,238,750	-				+1.1
2,238,750	-				+0.3
2,238,837	+		IAI47_10585	0.10	-1.7
2,238,838	-		IAI47_10585	0.10	-0.4
2,238,838	-		IAI47_10585	0.10	+1.2
2,238,843	+		IAI47_10585	0.11	+2.8
2,238,843	+		IAI47_10585	0.11	-1.7
2,238,844	-		IAI47_10585	0.11	+0.7
2,238,844	-		IAI47_10585	0.11	-0.7
2,238,870	+		IAI47_10585	0.13	-0.7
2,238,941	-		IAI47_10585	0.19	-0.4
2,238,959	+		IAI47_10585	0.20	-1.9
2,238,959	+		IAI47_10585	0.20	-0.3
2,238,959	+		IAI47_10585	0.20	+1.4
2,238,959	+		IAI47_10585	0.20	-0.3
2,238,960	-		IAI47_10585	0.20	+0.2
2,238,984	+		IAI47_10585	0.22	-1.5
2,238,984	+		IAI47_10585	0.22	-1.2
2,238,985	-		IAI47_10585	0.22	+0.1
2,239,053	+		IAI47_10585	0.27	+0.5
2,239,062	+		IAI47_10585	0.28	-0.0
2,239,062	+		IAI47_10585	0.28	-0.4
2,239,062	+		IAI47_10585	0.28	-1.6
2,239,063	-		IAI47_10585	0.28	-1.8
2,239,067	+		IAI47_10585	0.28	-1.1
2,239,067	+		IAI47_10585	0.28	+0.5
2,239,068	-		IAI47_10585	0.29	+0.6
2,239,068	-		IAI47_10585	0.29	+0.8
2,239,068	-		IAI47_10585	0.29	+0.3
2,239,068	-		IAI47_10585	0.29	-0.5
2,239,068	-		IAI47_10585	0.29	+1.5
2,239,068	-		IAI47_10585	0.29	+1.6
2,239,083	+		IAI47_10585	0.30	+2.1
2,239,099	-		IAI47_10585	0.31	+1.6
2,239,115	-		IAI47_10585	0.32	+0.4
2,239,127	+		IAI47_10585	0.33	-0.5
2,239,128	-		IAI47_10585	0.33	+1.9
2,239,128	-		IAI47_10585	0.33	+3.2
2,239,144	+		IAI47_10585	0.35	+0.6
2,239,144	+		IAI47_10585	0.35	-1.5
2,239,144	+		IAI47_10585	0.35	+0.6
2,239,145	-		IAI47_10585	0.35	+1.9
2,239,145	-		IAI47_10585	0.35	-0.4
2,239,145	-		IAI47_10585	0.35	-1.2
2,239,145	-		IAI47_10585	0.35	-1.2
2,239,145	-		IAI47_10585	0.35	-0.2
2,239,170	-		IAI47_10585	0.37	+0.1
2,239,170	-		IAI47_10585	0.37	-0.4
2,239,199	+		IAI47_10585	0.39	+0.1
2,239,199	+		IAI47_10585	0.39	-0.9
2,239,209	+		IAI47_10585	0.40	-2.4
2,239,304	+		IAI47_10585	0.47	-0.2
2,239,319	-		IAI47_10585	0.48	+0.7
2,239,319	-		IAI47_10585	0.48	+0.3
2,239,319	-		IAI47_10585	0.48	-1.4
2,239,339	-		IAI47_10585	0.50	-0.3
2,239,377	+		IAI47_10585	0.53	-1.6
2,239,635	+		IAI47_10585	0.73	-0.2
2,239,635	+		IAI47_10585	0.73	+2.2
2,239,636	-		IAI47_10585	0.73	+3.1
2,239,636	-		IAI47_10585	0.73	-0.2
2,239,662	+		IAI47_10585	0.75	-1.5
2,239,682	+		IAI47_10585	0.77	+0.3
2,239,682	+		IAI47_10585	0.77	-1.8
2,239,682	+		IAI47_10585	0.77	-2.2
2,239,774	+		IAI47_10585	0.84	-0.7
2,239,774	+		IAI47_10585	0.84	-0.9
2,239,775	-		IAI47_10585	0.84	+0.6
2,239,775	-		IAI47_10585	0.84	-0.6
2,239,775	-		IAI47_10585	0.84	+0.8
2,239,908	+				+1.6
2,239,909	-				-0.8
2,239,943	+				+2.1
2,239,944	-				-1.4
2,239,944	-				-1.4
2,239,991	+				-0.9
2,239,992	-				+0.2
2,239,992	-				+0.3
2,240,007	+				-1.1
2,240,054	+		IAI47_10590	0.20	+0.4
2,240,055	-		IAI47_10590	0.20	+0.6
2,240,108	+		IAI47_10590	0.34	+0.6
2,240,242	+		IAI47_10590	0.69	+0.8
2,240,242	+		IAI47_10590	0.69	-1.4
2,240,242	+		IAI47_10590	0.69	+3.2
2,240,242	+		IAI47_10590	0.69	+1.2
2,240,285	+		IAI47_10590	0.80	+2.0
2,240,285	+		IAI47_10590	0.80	+2.1
2,240,285	+		IAI47_10590	0.80	-0.8
2,240,286	-		IAI47_10590	0.80	+0.8
2,240,300	-		IAI47_10590	0.84	-1.1
2,240,300	-		IAI47_10590	0.84	-0.4
2,240,300	-		IAI47_10590	0.84	+0.6
2,240,300	-		IAI47_10590	0.84	+0.5
2,240,300	-		IAI47_10590	0.84	-1.1
2,240,342	+				+2.3
2,240,343	-				-1.5
2,240,345	-				+3.2
2,240,345	-				+1.1
2,240,384	+				-0.2
2,240,385	-				-2.2
2,240,443	+				-0.9
2,240,444	-				+2.0
2,240,455	+				-0.8
2,240,455	+				-1.2
2,240,456	-				-0.4
2,240,456	-				+1.6
2,240,456	-				-0.7
2,240,499	-				+1.2
2,240,499	-				+0.3
2,240,528	+				-1.2
2,240,529	-				+0.1
2,240,529	-				+1.4
2,240,529	-				-0.5
2,240,543	-				+0.3
2,240,579	+				+0.6
2,240,579	+				-0.7
2,240,579	+				+0.5
2,240,579	+				-0.8
2,240,580	-				-1.4
2,240,580	-				-1.3
2,240,593	-				-0.7
2,240,596	+				+1.3
2,240,596	+				+1.4
2,240,597	-				-1.2
2,240,597	-				-1.9
2,240,597	-				+1.3
2,240,597	-				-0.1
2,240,597	-				+0.5
2,240,611	+				+0.1
2,240,613	+				+0.5
2,240,613	+				+0.4
2,240,618	+				+0.8
2,240,618	+				+0.7
2,240,631	-				-0.4
2,240,705	-				-1.4
2,240,733	+				+1.7
2,240,734	-				+0.1
2,240,784	-		IAI47_10595	0.20	-1.5
2,240,805	-		IAI47_10595	0.28	+0.8
2,240,838	+		IAI47_10595	0.41	+2.0
2,240,839	-		IAI47_10595	0.42	-0.8
2,240,848	+		IAI47_10595	0.45	+2.8
2,240,871	-		IAI47_10595	0.54	-1.1
2,240,871	-		IAI47_10595	0.54	-1.7
2,240,871	-		IAI47_10595	0.54	-0.2
2,240,893	+		IAI47_10595	0.63	-1.3
2,240,894	-		IAI47_10595	0.63	-0.2
2,240,919	+		IAI47_10595	0.73	+0.4
2,240,920	-		IAI47_10595	0.74	-0.5
2,240,920	-		IAI47_10595	0.74	+1.2
2,240,922	+		IAI47_10595	0.75	+0.3
2,240,922	+		IAI47_10595	0.75	-0.4
2,240,922	+		IAI47_10595	0.75	-0.2
2,240,922	+		IAI47_10595	0.75	+1.3
2,240,922	+		IAI47_10595	0.75	-1.2
2,240,923	-		IAI47_10595	0.75	+1.1
2,240,923	-		IAI47_10595	0.75	-0.1
2,240,953	+		IAI47_10595	0.87	-0.1
2,240,954	-		IAI47_10595	0.87	-0.2
2,240,954	-		IAI47_10595	0.87	+1.4
2,240,954	-		IAI47_10595	0.87	+0.5
2,240,955	+		IAI47_10595	0.88	-0.4
2,240,955	+		IAI47_10595	0.88	-0.1
2,240,955	+		IAI47_10595	0.88	+0.3
2,240,956	-		IAI47_10595	0.88	+0.6
2,240,956	-		IAI47_10595	0.88	-1.4
2,240,956	-		IAI47_10595	0.88	-0.2
2,240,958	+		IAI47_10595	0.89	+0.8
2,240,958	+		IAI47_10595	0.89	-0.5
2,240,958	+		IAI47_10595	0.89	+0.3
2,240,958	+		IAI47_10595	0.89	+2.1
2,240,958	+		IAI47_10595	0.89	+1.0
2,240,958	+		IAI47_10595	0.89	-0.0
2,240,959	-		IAI47_10595	0.89	-0.7
2,240,959	-		IAI47_10595	0.89	+1.6
2,240,962	+				+1.8
2,240,962	+				+0.9
2,240,962	+				+0.3
2,240,963	-				+0.2