Strain Fitness in Pantoea sp. MT58 around IAI47_08075

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,707,447	+				+3.0
1,707,447	+				-0.6
1,707,448	-				-0.3
1,707,448	-				+3.4
1,707,448	-				+0.6
1,707,489	+				-1.7
1,707,489	+				-1.1
1,707,490	-				+2.6
1,707,490	-				-1.9
1,707,490	-				-0.9
1,707,507	-				+0.8
1,707,507	-				+2.6
1,707,507	-				-1.0
1,707,513	+				+1.5
1,707,531	+				-2.0
1,707,531	+				-1.1
1,707,531	+				-0.6
1,707,531	+				+0.3
1,707,532	-				+2.3
1,707,612	+		IAI47_08070	0.12	-1.5
1,707,612	+		IAI47_08070	0.12	+0.7
1,707,612	+		IAI47_08070	0.12	+0.7
1,707,614	+		IAI47_08070	0.12	+2.5
1,707,614	+		IAI47_08070	0.12	+1.0
1,707,615	-		IAI47_08070	0.12	+0.1
1,707,627	-		IAI47_08070	0.14	+0.1
1,707,644	+		IAI47_08070	0.15	-0.8
1,707,645	-		IAI47_08070	0.16	-1.1
1,707,686	+		IAI47_08070	0.20	-0.5
1,707,687	-		IAI47_08070	0.20	-0.5
1,707,690	+		IAI47_08070	0.21	+0.6
1,707,690	+		IAI47_08070	0.21	-1.6
1,707,690	+		IAI47_08070	0.21	-0.1
1,707,715	+		IAI47_08070	0.23	+1.9
1,707,715	+		IAI47_08070	0.23	-0.7
1,707,743	+		IAI47_08070	0.27	+1.2
1,707,744	-		IAI47_08070	0.27	-0.4
1,707,744	-		IAI47_08070	0.27	-1.1
1,707,744	-		IAI47_08070	0.27	+0.2
1,707,809	+		IAI47_08070	0.34	+0.8
1,707,810	-		IAI47_08070	0.34	-1.2
1,707,810	-		IAI47_08070	0.34	+0.1
1,707,842	+		IAI47_08070	0.38	-1.5
1,707,842	+		IAI47_08070	0.38	-2.1
1,707,842	+		IAI47_08070	0.38	+0.3
1,707,842	+		IAI47_08070	0.38	+0.9
1,707,843	-		IAI47_08070	0.38	-0.5
1,707,843	-		IAI47_08070	0.38	-0.1
1,707,843	-		IAI47_08070	0.38	+0.1
1,707,843	-		IAI47_08070	0.38	-0.4
1,707,843	-		IAI47_08070	0.38	-1.1
1,707,843	-		IAI47_08070	0.38	+0.2
1,707,843	-		IAI47_08070	0.38	-1.4
1,707,845	+		IAI47_08070	0.38	+0.7
1,707,845	+		IAI47_08070	0.38	+3.1
1,707,845	+		IAI47_08070	0.38	+1.1
1,707,845	+		IAI47_08070	0.38	-0.7
1,707,845	+		IAI47_08070	0.38	+0.4
1,707,845	+		IAI47_08070	0.38	-1.4
1,707,846	-		IAI47_08070	0.38	-2.7
1,707,846	-		IAI47_08070	0.38	+0.3
1,707,848	+		IAI47_08070	0.38	+0.1
1,707,848	+		IAI47_08070	0.38	-1.5
1,707,848	+		IAI47_08070	0.38	-1.5
1,707,848	+		IAI47_08070	0.38	+2.1
1,707,849	-		IAI47_08070	0.39	-0.1
1,707,849	-		IAI47_08070	0.39	-0.8
1,707,849	-		IAI47_08070	0.39	+0.1
1,707,849	-		IAI47_08070	0.39	-0.7
1,707,849	-		IAI47_08070	0.39	-0.4
1,707,917	+		IAI47_08070	0.46	+0.8
1,707,917	+		IAI47_08070	0.46	-2.3
1,707,937	-		IAI47_08070	0.48	-2.2
1,707,937	-		IAI47_08070	0.48	+1.8
1,707,947	+		IAI47_08070	0.50	-0.2
1,707,952	-		IAI47_08070	0.50	+0.8
1,707,952	-		IAI47_08070	0.50	-0.4
1,707,953	+		IAI47_08070	0.50	+1.4
1,707,953	+		IAI47_08070	0.50	-0.5
1,707,954	-		IAI47_08070	0.50	-1.5
1,707,954	-		IAI47_08070	0.50	-0.1
1,707,958	+		IAI47_08070	0.51	+1.0
1,707,958	+		IAI47_08070	0.51	-0.0
1,707,959	-		IAI47_08070	0.51	-2.2
1,707,959	-		IAI47_08070	0.51	+0.2
1,707,959	-		IAI47_08070	0.51	+1.0
1,707,964	+		IAI47_08070	0.51	+0.8
1,707,964	+		IAI47_08070	0.51	+0.9
1,707,981	-		IAI47_08070	0.53	-1.2
1,707,995	+		IAI47_08070	0.55	-1.0
1,707,995	+		IAI47_08070	0.55	-2.0
1,707,996	-		IAI47_08070	0.55	+1.2
1,708,019	+		IAI47_08070	0.58	+3.6
1,708,027	+		IAI47_08070	0.59	-1.3
1,708,028	-		IAI47_08070	0.59	-1.3
1,708,058	-		IAI47_08070	0.62	+0.7
1,708,070	+		IAI47_08070	0.63	+1.1
1,708,071	-		IAI47_08070	0.64	+1.3
1,708,071	-		IAI47_08070	0.64	+1.1
1,708,090	+		IAI47_08070	0.66	-1.6
1,708,142	+		IAI47_08070	0.72	-0.8
1,708,189	+		IAI47_08070	0.77	-0.1
1,708,189	+		IAI47_08070	0.77	-1.1
1,708,190	-		IAI47_08070	0.77	+0.9
1,708,190	-		IAI47_08070	0.77	-2.0
1,708,190	-		IAI47_08070	0.77	+1.7
1,708,217	+		IAI47_08070	0.80	+0.2
1,708,217	+		IAI47_08070	0.80	+0.3
1,708,217	+		IAI47_08070	0.80	+0.6
1,708,218	-		IAI47_08070	0.80	-2.4
1,708,226	+		IAI47_08070	0.81	-1.6
1,708,226	+		IAI47_08070	0.81	-1.8
1,708,226	+		IAI47_08070	0.81	+0.8
1,708,226	+		IAI47_08070	0.81	+0.9
1,708,227	-		IAI47_08070	0.81	-2.6
1,708,227	-		IAI47_08070	0.81	-0.4
1,708,227	-		IAI47_08070	0.81	-0.7
1,708,227	-		IAI47_08070	0.81	+0.8
1,708,227	-		IAI47_08070	0.81	-1.2
1,708,227	-		IAI47_08070	0.81	+0.6
1,708,227	-		IAI47_08070	0.81	+0.3
1,708,227	-		IAI47_08070	0.81	+2.2
1,708,256	+		IAI47_08070	0.84	-0.8
1,708,257	-		IAI47_08070	0.84	-0.0
1,708,286	+		IAI47_08070	0.88	+0.2
1,708,286	+		IAI47_08070	0.88	+0.6
1,708,355	+				-0.7
1,708,355	+				-1.0
1,708,356	-				-0.8
1,708,382	+				+0.9
1,708,383	-				-0.1
1,708,386	-				-1.1
1,708,446	+				+1.8
1,708,542	+		IAI47_08075	0.54	+2.4
1,708,543	-		IAI47_08075	0.55	-1.2
1,708,543	-		IAI47_08075	0.55	+0.8
1,708,543	-		IAI47_08075	0.55	+2.8
1,708,543	-		IAI47_08075	0.55	-0.3
1,708,543	-		IAI47_08075	0.55	-1.1
1,708,543	-		IAI47_08075	0.55	-0.8
1,708,543	-		IAI47_08075	0.55	+2.7
1,708,558	+		IAI47_08075	0.62	+0.9
1,708,558	+		IAI47_08075	0.62	-0.8
1,708,603	+		IAI47_08075	0.85	+0.2
1,708,603	+		IAI47_08075	0.85	+2.8
1,708,603	+		IAI47_08075	0.85	+1.9
1,708,604	-		IAI47_08075	0.85	-1.1
1,708,618	+				+1.1
1,708,627	+				+1.3
1,708,628	-				-1.6
1,708,628	-				+0.6
1,708,628	-				-0.0
1,708,633	+				+0.6
1,708,634	-				-1.1
1,708,634	-				-0.5
1,708,660	+				-1.2
1,708,660	+				+1.0
1,708,661	-				-0.5
1,708,690	+				-1.0
1,708,690	+				+1.7
1,708,690	+				+0.2
1,708,691	-				+0.2
1,708,702	-				+1.2
1,708,752	-				+0.1
1,708,752	-				-0.7
1,708,764	-				-0.7
1,708,764	-				-0.7
1,708,764	-				-0.8
1,708,764	-				+0.3
1,708,783	+				+0.1
1,708,784	-				+0.8
1,708,839	+				+0.6
1,708,840	-				+1.3
1,708,921	-				-1.2
1,708,933	+				+0.8
1,708,943	+				+2.1
1,708,991	+		IAI47_08080	0.16	+2.7
1,708,991	+		IAI47_08080	0.16	+0.4
1,709,009	+		IAI47_08080	0.23	+1.9
1,709,010	-		IAI47_08080	0.24	+1.2
1,709,022	+		IAI47_08080	0.29	+0.0
1,709,023	-		IAI47_08080	0.29	-1.1
1,709,023	-		IAI47_08080	0.29	+1.6
1,709,052	+		IAI47_08080	0.41	+1.9
1,709,052	+		IAI47_08080	0.41	-2.2
1,709,134	+		IAI47_08080	0.73	-0.0
1,709,135	-		IAI47_08080	0.74	-1.0
1,709,143	-		IAI47_08080	0.77	-1.4
1,709,197	+				-0.7
1,709,197	+				+1.6
1,709,197	+				+1.0
1,709,197	+				+2.1
1,709,197	+				-0.4
1,709,198	-				-2.0
1,709,198	-				+2.4
1,709,198	-				-2.4
1,709,202	-				+1.4
1,709,229	+				-1.5
1,709,229	+				-0.5
1,709,229	+				-0.4
1,709,229	+				-1.6
1,709,230	-				-1.3
1,709,299	-				-1.3
1,709,299	-				-2.3
1,709,306	-				-0.7
1,709,306	-				-1.7
1,709,392	-		IAI47_08085	0.20	-2.0
1,709,392	-		IAI47_08085	0.20	-1.1
1,709,392	-		IAI47_08085	0.20	-1.7
1,709,392	-		IAI47_08085	0.20	-1.5
1,709,395	-		IAI47_08085	0.21	-2.0
1,709,395	-		IAI47_08085	0.21	+0.5
1,709,395	-		IAI47_08085	0.21	-0.2
1,709,395	-		IAI47_08085	0.21	-2.0
1,709,435	-		IAI47_08085	0.27	-2.0
1,709,449	-		IAI47_08085	0.29	+0.5
1,709,566	-		IAI47_08085	0.48	-1.2