Strain Fitness in Pantoea sp. MT58 around IAI47_08055

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,700,579	+				-0.4
1,700,580	-				+0.7
1,700,585	+				-0.6
1,700,592	-				-0.7
1,700,630	+				+0.0
1,700,630	+				+2.6
1,700,631	-				+1.9
1,700,631	-				+1.4
1,700,667	+				-0.0
1,700,667	+				+0.2
1,700,782	+				+0.7
1,700,782	+				-0.7
1,700,838	+				-0.2
1,700,838	+				+0.0
1,700,838	+				+1.0
1,700,838	+				+1.4
1,700,838	+				+1.4
1,700,838	+				+1.2
1,700,840	+				+0.8
1,700,840	+				+0.2
1,700,840	+				-0.8
1,700,840	+				-1.1
1,700,840	+				-1.9
1,700,841	-				-1.9
1,700,841	-				-0.5
1,700,841	-				-0.3
1,700,841	-				+1.6
1,700,841	-				+0.5
1,700,841	-				-0.1
1,700,841	-				+0.3
1,700,843	+				-0.5
1,700,859	+				-0.6
1,700,860	-				-0.3
1,700,873	-				-0.2
1,700,877	-				-1.7
1,700,877	-				-0.4
1,700,877	-				+0.1
1,700,896	+				-1.9
1,700,899	+				-0.4
1,700,899	+				+0.2
1,700,917	-				-2.0
1,700,929	+				-1.4
1,700,929	+				+0.7
1,700,930	-				+0.4
1,700,967	+				-1.4
1,700,967	+				-0.9
1,700,982	-				-0.7
1,700,982	-				+0.2
1,700,997	-				+1.4
1,700,997	-				-1.5
1,701,074	+				-1.4
1,701,074	+				-0.3
1,701,074	+				+2.3
1,701,074	+				+2.1
1,701,075	-				+2.8
1,701,104	+				+2.0
1,701,104	+				+0.1
1,701,104	+				+0.8
1,701,104	+				+0.9
1,701,104	+				-0.3
1,701,104	+				-0.9
1,701,104	+				-1.0
1,701,105	-				+3.6
1,701,105	-				+0.2
1,701,105	-				-0.4
1,701,105	-				-1.2
1,701,105	-				-1.0
1,701,105	-				+0.6
1,701,105	-				-0.0
1,701,105	-				-1.7
1,701,105	-				-0.8
1,701,116	+				+0.1
1,701,116	+				-1.4
1,701,117	-				-1.4
1,701,121	+				+0.9
1,701,121	+				-0.0
1,701,122	-				+0.2
1,701,122	-				+0.9
1,701,157	+				+1.6
1,701,157	+				+0.5
1,701,157	+				+0.2
1,701,157	+				+0.1
1,701,157	+				+1.3
1,701,158	-				+1.3
1,701,158	-				-1.8
1,701,158	-				-2.5
1,701,159	+				+0.5
1,701,159	+				-0.5
1,701,159	+				+0.4
1,701,159	+				-0.1
1,701,159	+				+0.8
1,701,159	+				+0.8
1,701,159	+				-0.9
1,701,159	+				+0.4
1,701,159	+				+2.2
1,701,159	+				+0.6
1,701,160	-				+1.1
1,701,160	-				-0.4
1,701,160	-				-0.5
1,701,160	-				+0.3
1,701,160	-				-0.8
1,701,162	+				+1.2
1,701,162	+				-0.4
1,701,162	+				-2.1
1,701,162	+				-0.0
1,701,162	+				+0.2
1,701,162	+				-1.8
1,701,162	+				+1.6
1,701,162	+				-2.7
1,701,162	+				+1.3
1,701,163	-				-0.0
1,701,163	-				-0.5
1,701,168	+				-0.9
1,701,168	+				+0.5
1,701,168	+				-1.0
1,701,169	-				+0.8
1,701,169	-				+1.8
1,701,169	-				+1.4
1,701,169	-				+1.5
1,701,226	+				-0.1
1,701,226	+				+1.1
1,701,226	+				+0.8
1,701,226	+				-0.5
1,701,226	+				-0.6
1,701,226	+				-0.4
1,701,227	-				-1.1
1,701,227	-				+2.6
1,701,227	-				+0.1
1,701,227	-				-1.4
1,701,227	-				-0.8
1,701,239	+				+0.9
1,701,239	+				+1.2
1,701,239	+				+0.6
1,701,240	-				-0.4
1,701,240	-				+0.3
1,701,240	-				-0.0
1,701,240	-				-0.0
1,701,267	+				+0.6
1,701,267	+				+2.2
1,701,268	-				+1.6
1,701,268	-				+1.0
1,701,277	+				+1.7
1,701,278	-				+0.5
1,701,278	-				+0.2
1,701,290	-				-1.1
1,701,330	+				+0.9
1,701,330	+				+2.5
1,701,330	+				-0.0
1,701,330	+				+1.3
1,701,330	+				+0.8
1,701,330	+				+1.6
1,701,330	+				-0.1
1,701,331	-				+1.2
1,701,331	-				-0.0
1,701,332	+				+1.3
1,701,332	+				-0.7
1,701,332	+				+1.8
1,701,332	+				+1.0
1,701,332	+				-0.4
1,701,332	+				-2.8
1,701,332	+				+1.1
1,701,332	+				+1.8
1,701,332	+				-0.0
1,701,333	-				+0.3
1,701,362	+				+2.3
1,701,362	+				-1.1
1,701,362	+				+0.2
1,701,362	+				-1.4
1,701,362	+				-0.0
1,701,363	-				-1.7
1,701,363	-				-0.2
1,701,363	-				+0.5
1,701,363	-				-0.9
1,701,363	-				+1.1
1,701,460	+				-0.5
1,701,460	+				-0.2
1,701,460	+				-1.1
1,701,460	+				+0.8
1,701,461	-				+1.5
1,701,488	+				-1.7
1,701,546	+				-0.5
1,701,546	+				-1.8
1,701,547	-				-2.6
1,701,553	+				-0.4
1,701,553	+				-0.4
1,701,565	+				-1.2
1,701,566	-				-1.3
1,701,566	-				-1.3
1,701,621	+		IAI47_08055	0.12	-0.1
1,701,621	+		IAI47_08055	0.12	-1.4
1,701,633	+		IAI47_08055	0.14	-0.4
1,701,633	+		IAI47_08055	0.14	-0.3
1,701,634	-		IAI47_08055	0.15	+0.9
1,701,634	-		IAI47_08055	0.15	-0.4
1,701,647	+		IAI47_08055	0.17	-1.4
1,701,647	+		IAI47_08055	0.17	-0.1
1,701,647	+		IAI47_08055	0.17	-0.9
1,701,648	-		IAI47_08055	0.18	-0.4
1,701,648	-		IAI47_08055	0.18	+0.2
1,701,650	+		IAI47_08055	0.18	-0.2
1,701,672	-		IAI47_08055	0.23	-0.8
1,701,749	+		IAI47_08055	0.39	-1.1
1,701,749	+		IAI47_08055	0.39	-1.1
1,701,749	+		IAI47_08055	0.39	-0.2
1,701,750	-		IAI47_08055	0.40	+0.5
1,701,750	-		IAI47_08055	0.40	-0.9
1,701,776	+		IAI47_08055	0.45	-1.7
1,701,776	+		IAI47_08055	0.45	+0.5
1,701,776	+		IAI47_08055	0.45	+0.1
1,701,776	+		IAI47_08055	0.45	+0.1
1,701,776	+		IAI47_08055	0.45	+1.5
1,701,777	-		IAI47_08055	0.45	-1.1
1,701,777	-		IAI47_08055	0.45	+0.7
1,701,789	+		IAI47_08055	0.48	+0.2
1,701,790	-		IAI47_08055	0.48	+0.2
1,701,901	+		IAI47_08055	0.72	-0.0
1,701,928	+		IAI47_08055	0.78	+1.5
1,701,928	+		IAI47_08055	0.78	-0.5
1,701,928	+		IAI47_08055	0.78	+2.1
1,701,929	-		IAI47_08055	0.78	-1.4
1,701,929	-		IAI47_08055	0.78	-0.0
1,701,929	-		IAI47_08055	0.78	+1.7
1,701,950	+		IAI47_08055	0.83	+0.6
1,701,998	+				-1.0
1,701,998	+				-0.4
1,701,998	+				-0.6
1,701,999	-				-2.8
1,701,999	-				-0.7
1,702,009	+				+3.8
1,702,009	+				-0.2
1,702,009	+				+0.2
1,702,009	+				-1.2
1,702,010	-				-0.9
1,702,010	-				+1.1
1,702,010	-				-0.7
1,702,022	-				-1.6
1,702,028	+				+0.3
1,702,029	-				+1.8
1,702,033	+				-0.1
1,702,033	+				+0.1
1,702,033	+				+0.6
1,702,034	-				+0.1
1,702,047	+				+0.8
1,702,056	+				-0.9
1,702,056	+				+0.1
1,702,061	-				-0.0
1,702,139	+				-0.7
1,702,140	-				-0.0
1,702,155	+				+0.8
1,702,156	-				-1.4
1,702,187	+				+1.4
1,702,187	+				-1.4
1,702,188	-				+2.6
1,702,188	-				+0.5
1,702,188	-				-1.3
1,702,201	+				-0.1
1,702,202	-				-0.7
1,702,202	-				-0.1
1,702,218	+				-2.0
1,702,218	+				+1.8
1,702,289	+				+2.1
1,702,301	+				+0.9
1,702,331	+				-1.2
1,702,352	+				-0.0
1,702,352	+				+2.0
1,702,352	+				-0.1
1,702,352	+				+1.2
1,702,385	+				-0.0
1,702,395	-				-1.1
1,702,405	+				-0.1
1,702,406	-				+0.2
1,702,407	+				-0.9
1,702,407	+				-0.3
1,702,408	-				-0.4
1,702,416	+				+2.4
1,702,416	+				+0.9
1,702,416	+				-0.1
1,702,417	-				-1.4
1,702,433	+				+2.0
1,702,433	+				-0.7
1,702,434	-				-0.0
1,702,435	+				-2.0
1,702,435	+				+1.9
1,702,435	+				+1.7
1,702,435	+				+0.4
1,702,435	+				+0.9
1,702,435	+				-0.2
1,702,435	+				+2.6
1,702,436	-				-1.8
1,702,436	-				+2.0
1,702,436	-				-0.1
1,702,436	-				+1.4
1,702,436	-				-0.6
1,702,448	+				+1.7
1,702,474	-				-0.4
1,702,475	+				+2.0
1,702,501	-				-0.0
1,702,501	-				+2.5
1,702,577	+				-2.4
1,702,577	+				-2.3
1,702,578	-				-2.3
1,702,578	-				-0.3
1,702,578	-				-0.7
1,702,601	+				-1.2
1,702,601	+				+1.6
1,702,602	-				+1.9
1,702,602	-				-1.7
1,702,606	+				+3.3
1,702,606	+				-1.4
1,702,606	+				+1.5
1,702,606	+				+1.9
1,702,606	+				+0.7
1,702,606	+				+2.3
1,702,611	+				-0.0
1,702,611	+				+0.5
1,702,611	+				-0.7
1,702,611	+				-1.2
1,702,611	+				+2.8
1,702,611	+				-0.8
1,702,611	+				+1.6
1,702,611	+				-0.9
1,702,612	-				+0.7
1,702,612	-				-0.6
1,702,612	-				-0.5
1,702,612	-				-1.7
1,702,618	+				+0.5
1,702,651	-				+0.5
1,702,654	+				-2.1
1,702,654	+				+2.1
1,702,655	-				+1.4
1,702,665	+				+1.8
1,702,665	+				+0.2
1,702,665	+				-1.3
1,702,672	-				+0.9
1,702,698	+				-1.4
1,702,698	+				+1.4
1,702,699	-				+0.0
1,702,723	+				-1.3
1,702,723	+				-0.8
1,702,723	+				+1.1
1,702,725	+				+2.2
1,702,751	+				+0.7
1,702,751	+				-1.3
1,702,751	+				+1.0
1,702,751	+				-0.9
1,702,751	+				+0.2
1,702,751	+				-0.5
1,702,751	+				-1.3
1,702,751	+				-1.3
1,702,752	-				+2.6
1,702,752	-				-2.2
1,702,752	-				+0.1
1,702,752	-				-2.1
1,702,752	-				-0.7
1,702,752	-				+0.1
1,702,754	+				-0.5
1,702,754	+				+2.6
1,702,754	+				-0.2
1,702,755	-				-0.8
1,702,768	-				-1.6
1,702,768	-				-1.4
1,702,837	+				-0.0
1,702,837	+				+2.6
1,702,838	-				+1.4
1,702,838	-				-0.7
1,702,886	-				-0.2
1,702,913	+				-1.0
1,702,924	+				+3.0
1,702,924	+				+0.3
1,702,924	+				+0.3
1,702,925	-				-1.0
1,702,925	-				+1.6
1,702,928	+				+2.4
1,702,928	+				+0.8
1,702,928	+				-0.7
1,702,928	+				+0.0
1,702,928	+				+1.6
1,702,928	+				-0.7
1,702,928	+				-1.2
1,702,928	+				+1.2
1,702,928	+				-0.2
1,702,928	+				+1.3
1,702,929	-				-0.8
1,702,929	-				-0.9
1,702,929	-				+0.8
1,702,932	+				+1.0
1,702,932	+				+0.6
1,702,933	-				-0.5
1,702,933	-				+0.2
1,702,933	-				-0.8
1,702,998	-		IAI47_08060	0.15	-0.2
1,702,998	-		IAI47_08060	0.15	-1.3
1,702,998	-		IAI47_08060	0.15	-1.1
1,702,998	-		IAI47_08060	0.15	+0.4
1,703,027	+		IAI47_08060	0.18	+0.9