Strain Fitness in Pantoea sp. MT58 around IAI47_06820

Experiment: Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,422,229	-		IAI47_06810	0.82	+0.3
1,422,291	+		IAI47_06810	0.90	-1.9
1,422,306	+				+0.1
1,422,307	-				+0.1
1,422,316	+				+1.0
1,422,317	-				-1.0
1,422,317	-				-1.3
1,422,317	-				+0.1
1,422,426	+				+1.4
1,422,426	+				+0.7
1,422,451	+				-0.4
1,422,452	-				-1.5
1,422,452	-				-1.3
1,422,452	-				+0.7
1,422,452	-				-1.0
1,422,712	+		IAI47_06815	0.42	-2.2
1,422,713	-		IAI47_06815	0.42	+0.8
1,422,713	-		IAI47_06815	0.42	+0.8
1,422,766	+		IAI47_06815	0.50	-0.4
1,422,766	+		IAI47_06815	0.50	+0.3
1,422,766	+		IAI47_06815	0.50	-0.9
1,422,767	-		IAI47_06815	0.50	-0.5
1,422,797	+		IAI47_06815	0.54	+0.9
1,422,798	-		IAI47_06815	0.54	-0.8
1,422,798	-		IAI47_06815	0.54	-0.8
1,422,847	+		IAI47_06815	0.61	-1.2
1,422,912	-		IAI47_06815	0.71	-1.0
1,422,912	-		IAI47_06815	0.71	+1.1
1,422,912	-		IAI47_06815	0.71	+0.4
1,422,912	-		IAI47_06815	0.71	+1.5
1,422,917	+		IAI47_06815	0.72	-0.0
1,422,917	+		IAI47_06815	0.72	+1.9
1,423,039	+		IAI47_06815	0.89	+0.4
1,423,039	+		IAI47_06815	0.89	-2.0
1,423,039	+		IAI47_06815	0.89	+0.9
1,423,040	-		IAI47_06815	0.90	+3.4
1,423,040	-		IAI47_06815	0.90	+1.7
1,423,040	-		IAI47_06815	0.90	+1.4
1,423,040	-		IAI47_06815	0.90	+1.5
1,423,040	-		IAI47_06815	0.90	+0.7
1,423,060	-				+1.5
1,423,060	-				+1.6
1,423,073	+				+0.2
1,423,097	-				+1.3
1,423,097	-				+0.2
1,423,097	-				-1.8
1,423,097	-				-0.1
1,423,097	-				+1.0
1,423,097	-				-0.1
1,423,098	+				+0.7
1,423,098	+				-1.9
1,423,099	-				-2.1
1,423,099	-				-0.7
1,423,099	-				-1.0
1,423,099	-				-0.4
1,423,099	-				+0.1
1,423,120	-				+0.8
1,423,120	-				+1.0
1,423,120	-				-0.6
1,423,125	+				-0.4
1,423,125	+				-0.1
1,423,125	+				-1.3
1,423,125	+				+0.5
1,423,126	-				-0.3
1,423,126	-				-1.3
1,423,126	-				-0.3
1,423,126	-				-2.0
1,423,128	+				+0.7
1,423,128	+				+0.1
1,423,129	-				+1.1
1,423,129	-				+1.2
1,423,129	-				+0.4
1,423,168	+				+1.7
1,423,169	-				+0.1
1,423,200	+				+1.9
1,423,201	-				-0.2
1,423,258	+				+3.9
1,423,259	-				-1.1
1,423,259	-				+1.1
1,423,260	+				-1.3
1,423,260	+				+0.0
1,423,334	+				+2.0
1,423,449	+		IAI47_06820	0.17	+0.7
1,423,449	+		IAI47_06820	0.17	+0.7
1,423,449	+		IAI47_06820	0.17	-1.4
1,423,450	-		IAI47_06820	0.17	+0.8
1,423,450	-		IAI47_06820	0.17	-0.8
1,423,450	-		IAI47_06820	0.17	+0.1
1,423,450	-		IAI47_06820	0.17	-0.5
1,423,522	+		IAI47_06820	0.22	+0.4
1,423,531	+		IAI47_06820	0.23	-0.0
1,423,531	+		IAI47_06820	0.23	+0.4
1,423,531	+		IAI47_06820	0.23	+1.5
1,423,531	+		IAI47_06820	0.23	+0.1
1,423,531	+		IAI47_06820	0.23	-1.3
1,423,531	+		IAI47_06820	0.23	+0.4
1,423,531	+		IAI47_06820	0.23	+0.7
1,423,531	+		IAI47_06820	0.23	-0.4
1,423,532	-		IAI47_06820	0.23	-1.5
1,423,532	-		IAI47_06820	0.23	+0.1
1,423,532	-		IAI47_06820	0.23	+0.2
1,423,532	-		IAI47_06820	0.23	-1.6
1,423,532	-		IAI47_06820	0.23	+0.6
1,423,532	-		IAI47_06820	0.23	+0.3
1,423,532	-		IAI47_06820	0.23	+0.2
1,423,532	-		IAI47_06820	0.23	-1.7
1,423,532	-		IAI47_06820	0.23	-0.4
1,423,532	-		IAI47_06820	0.23	+1.6
1,423,532	-		IAI47_06820	0.23	-0.6
1,423,532	-		IAI47_06820	0.23	-2.2
1,423,585	+		IAI47_06820	0.26	+0.1
1,423,586	-		IAI47_06820	0.26	+0.5
1,423,586	-		IAI47_06820	0.26	+1.2
1,423,626	+		IAI47_06820	0.29	+0.1
1,423,626	+		IAI47_06820	0.29	+1.7
1,423,626	+		IAI47_06820	0.29	-0.4
1,423,626	+		IAI47_06820	0.29	+0.8
1,423,627	-		IAI47_06820	0.29	+0.4
1,423,627	-		IAI47_06820	0.29	-0.3
1,423,627	-		IAI47_06820	0.29	+0.1
1,423,734	+		IAI47_06820	0.37	+0.6
1,423,734	+		IAI47_06820	0.37	-0.5
1,423,734	+		IAI47_06820	0.37	-0.2
1,423,735	-		IAI47_06820	0.37	+0.8
1,423,735	-		IAI47_06820	0.37	-1.1
1,423,735	-		IAI47_06820	0.37	+0.1
1,423,741	-		IAI47_06820	0.37	+0.2
1,423,762	-		IAI47_06820	0.39	+0.9
1,423,762	-		IAI47_06820	0.39	+1.1
1,423,762	-		IAI47_06820	0.39	+2.1
1,423,762	-		IAI47_06820	0.39	-0.6
1,423,762	-		IAI47_06820	0.39	-1.1
1,423,812	+		IAI47_06820	0.42	-0.8
1,423,879	+		IAI47_06820	0.47	-0.0
1,423,879	+		IAI47_06820	0.47	-0.3
1,423,879	+		IAI47_06820	0.47	-1.5
1,423,879	+		IAI47_06820	0.47	+1.7
1,423,880	-		IAI47_06820	0.47	-0.7
1,424,034	+		IAI47_06820	0.57	+0.7
1,424,035	-		IAI47_06820	0.57	+0.4
1,424,035	-		IAI47_06820	0.57	-1.5
1,424,035	-		IAI47_06820	0.57	+0.4
1,424,035	-		IAI47_06820	0.57	-0.3
1,424,058	+		IAI47_06820	0.59	+0.7
1,424,058	+		IAI47_06820	0.59	-0.3
1,424,058	+		IAI47_06820	0.59	+0.5
1,424,058	+		IAI47_06820	0.59	+0.0
1,424,058	+		IAI47_06820	0.59	-1.0
1,424,058	+		IAI47_06820	0.59	-1.5
1,424,059	-		IAI47_06820	0.59	+1.4
1,424,250	-		IAI47_06820	0.72	-1.5
1,424,277	+		IAI47_06820	0.74	-2.0
1,424,277	+		IAI47_06820	0.74	-1.5
1,424,277	+		IAI47_06820	0.74	+1.0
1,424,278	-		IAI47_06820	0.74	-0.5
1,424,278	-		IAI47_06820	0.74	-0.2
1,424,299	+		IAI47_06820	0.75	-1.2
1,424,299	+		IAI47_06820	0.75	-0.4
1,424,299	+		IAI47_06820	0.75	+0.0
1,424,300	-		IAI47_06820	0.75	-0.2
1,424,300	-		IAI47_06820	0.75	+1.0
1,424,381	-		IAI47_06820	0.81	-0.6
1,424,381	-		IAI47_06820	0.81	+0.5
1,424,434	+		IAI47_06820	0.85	+0.8
1,424,435	-		IAI47_06820	0.85	+0.1
1,424,436	+		IAI47_06820	0.85	+1.7
1,424,436	+		IAI47_06820	0.85	+2.0
1,424,436	+		IAI47_06820	0.85	+0.6
1,424,436	+		IAI47_06820	0.85	+0.8
1,424,436	+		IAI47_06820	0.85	-0.0
1,424,437	-		IAI47_06820	0.85	+0.0
1,424,437	-		IAI47_06820	0.85	+0.0
1,424,437	-		IAI47_06820	0.85	-0.1
1,424,437	-		IAI47_06820	0.85	+0.0
1,424,437	-		IAI47_06820	0.85	-0.1
1,424,437	-		IAI47_06820	0.85	+0.7
1,424,488	+		IAI47_06820	0.88	+1.1
1,424,488	+		IAI47_06820	0.88	+0.0
1,424,488	+		IAI47_06820	0.88	-0.5
1,424,500	-		IAI47_06820	0.89	-2.9
1,424,500	-		IAI47_06820	0.89	-0.4
1,424,531	-				-0.7
1,424,578	+				-0.8
1,424,578	+				+1.0
1,424,578	+				-1.4
1,424,578	+				-0.2
1,424,578	+				+0.4
1,424,578	+				+0.8
1,424,579	-				+0.2
1,424,579	-				-0.3
1,424,579	-				+0.7
1,424,579	-				+2.9
1,424,579	-				-0.5
1,424,582	+				-0.1
1,424,582	+				-2.3
1,424,582	+				+1.3
1,424,582	+				+0.4
1,424,582	+				-0.1
1,424,583	-				+0.4
1,424,583	-				-0.3
1,424,583	-				-0.9
1,424,583	-				-0.9
1,424,583	-				+0.4
1,424,613	+				+0.2
1,424,614	-				+1.3
1,424,614	-				+2.3
1,424,654	+				+1.6
1,424,654	+				-0.2
1,424,655	-				-0.4
1,424,655	-				+0.5
1,424,655	-				-1.2
1,424,655	-				-1.7
1,424,655	-				-0.2
1,424,655	-				-1.1
1,424,659	+				+2.1
1,424,659	+				+2.7
1,424,659	+				+1.9
1,424,659	+				-0.5
1,424,659	+				+1.3
1,424,659	+				-0.1
1,424,659	+				+0.0
1,424,659	+				+1.8
1,424,659	+				-1.3
1,424,660	-				+0.7
1,424,660	-				-0.7
1,424,660	-				+0.9
1,424,660	-				-1.5
1,424,660	-				-0.2
1,424,660	-				-2.0
1,424,745	-				+0.3
1,424,855	+				+0.2
1,424,855	+				+1.5
1,424,856	-		IAI47_06825	0.10	+1.9
1,424,856	-		IAI47_06825	0.10	+0.4
1,424,894	+		IAI47_06825	0.13	-0.6
1,424,909	+		IAI47_06825	0.14	+0.0
1,424,909	+		IAI47_06825	0.14	-0.1
1,424,909	+		IAI47_06825	0.14	-1.4
1,424,910	-		IAI47_06825	0.14	+1.6
1,424,910	-		IAI47_06825	0.14	+0.2
1,424,910	-		IAI47_06825	0.14	+0.8
1,424,930	+		IAI47_06825	0.16	-0.5
1,424,943	+		IAI47_06825	0.17	-0.8
1,424,943	+		IAI47_06825	0.17	-0.4
1,424,943	+		IAI47_06825	0.17	+0.7
1,424,943	+		IAI47_06825	0.17	-2.5
1,424,943	+		IAI47_06825	0.17	+1.0
1,424,943	+		IAI47_06825	0.17	-0.9
1,424,944	-		IAI47_06825	0.17	+0.1
1,424,944	-		IAI47_06825	0.17	-0.3
1,424,944	-		IAI47_06825	0.17	-0.8
1,424,944	-		IAI47_06825	0.17	+1.5
1,424,957	+		IAI47_06825	0.18	+0.2
1,424,957	+		IAI47_06825	0.18	-2.3
1,424,957	+		IAI47_06825	0.18	-0.9
1,424,957	+		IAI47_06825	0.18	-1.3
1,424,969	-		IAI47_06825	0.19	+0.5
1,424,969	-		IAI47_06825	0.19	+1.1
1,424,969	-		IAI47_06825	0.19	+3.3
1,424,969	-		IAI47_06825	0.19	-0.4
1,424,969	-		IAI47_06825	0.19	+0.4
1,424,984	+		IAI47_06825	0.20	-0.4
1,424,984	+		IAI47_06825	0.20	+0.9
1,424,984	+		IAI47_06825	0.20	+0.2
1,424,985	-		IAI47_06825	0.20	-0.1
1,424,986	+		IAI47_06825	0.20	-0.9
1,424,986	+		IAI47_06825	0.20	+1.1
1,424,986	+		IAI47_06825	0.20	-1.9
1,424,986	+		IAI47_06825	0.20	+2.6
1,424,987	-		IAI47_06825	0.20	+0.1
1,424,987	-		IAI47_06825	0.20	-0.1
1,424,987	-		IAI47_06825	0.20	-1.6
1,424,987	-		IAI47_06825	0.20	+1.3
1,424,987	-		IAI47_06825	0.20	+0.2
1,424,987	-		IAI47_06825	0.20	+1.8
1,424,987	-		IAI47_06825	0.20	+1.8
1,425,018	-		IAI47_06825	0.23	+2.3
1,425,018	-		IAI47_06825	0.23	-0.9
1,425,018	-		IAI47_06825	0.23	-2.2
1,425,039	+		IAI47_06825	0.24	+0.1
1,425,039	+		IAI47_06825	0.24	+1.1
1,425,039	+		IAI47_06825	0.24	-0.5
1,425,044	+		IAI47_06825	0.25	+3.6
1,425,045	-		IAI47_06825	0.25	-0.1
1,425,128	+		IAI47_06825	0.31	+0.9
1,425,183	+		IAI47_06825	0.36	+1.0
1,425,184	-		IAI47_06825	0.36	-1.2
1,425,221	+		IAI47_06825	0.38	+0.8
1,425,221	+		IAI47_06825	0.38	+0.9
1,425,221	+		IAI47_06825	0.38	-0.8
1,425,247	+		IAI47_06825	0.40	-0.2
1,425,247	+		IAI47_06825	0.40	+0.6
1,425,248	-		IAI47_06825	0.41	-0.8
1,425,283	+		IAI47_06825	0.43	+0.3
1,425,283	+		IAI47_06825	0.43	-0.6
1,425,283	+		IAI47_06825	0.43	-1.0
1,425,283	+		IAI47_06825	0.43	+0.5
1,425,283	+		IAI47_06825	0.43	+1.7
1,425,283	+		IAI47_06825	0.43	-1.1
1,425,283	+		IAI47_06825	0.43	+1.7
1,425,283	+		IAI47_06825	0.43	-0.5
1,425,283	+		IAI47_06825	0.43	-0.8
1,425,283	+		IAI47_06825	0.43	+0.1
1,425,283	+		IAI47_06825	0.43	+1.2
1,425,284	-		IAI47_06825	0.43	+0.1
1,425,284	-		IAI47_06825	0.43	+0.4
1,425,284	-		IAI47_06825	0.43	-0.2
1,425,284	-		IAI47_06825	0.43	-1.2
1,425,284	-		IAI47_06825	0.43	-1.2
1,425,284	-		IAI47_06825	0.43	+1.4
1,425,284	-		IAI47_06825	0.43	+3.1
1,425,284	-		IAI47_06825	0.43	+0.7
1,425,284	-		IAI47_06825	0.43	+1.4
1,425,289	+		IAI47_06825	0.44	+0.0
1,425,289	+		IAI47_06825	0.44	+0.6
1,425,289	+		IAI47_06825	0.44	+0.4
1,425,289	+		IAI47_06825	0.44	-0.6
1,425,289	+		IAI47_06825	0.44	-1.2
1,425,289	+		IAI47_06825	0.44	-1.6
1,425,289	+		IAI47_06825	0.44	-0.3
1,425,290	-		IAI47_06825	0.44	-0.7
1,425,320	+		IAI47_06825	0.46	+0.7
1,425,321	-		IAI47_06825	0.46	+0.4
1,425,337	+		IAI47_06825	0.48	-0.9
1,425,338	-		IAI47_06825	0.48	-0.2
1,425,338	-		IAI47_06825	0.48	-0.3
1,425,340	+		IAI47_06825	0.48	+0.1
1,425,340	+		IAI47_06825	0.48	+0.1
1,425,340	+		IAI47_06825	0.48	-0.8
1,425,341	-		IAI47_06825	0.48	-0.6
1,425,341	-		IAI47_06825	0.48	+0.7
1,425,456	-		IAI47_06825	0.57	-0.3
1,425,500	+		IAI47_06825	0.60	+0.2
1,425,500	+		IAI47_06825	0.60	+0.4
1,425,501	-		IAI47_06825	0.60	+0.9
1,425,535	+		IAI47_06825	0.63	+0.2
1,425,535	+		IAI47_06825	0.63	-0.5
1,425,536	-		IAI47_06825	0.63	+0.4
1,425,536	-		IAI47_06825	0.63	+2.7
1,425,603	+		IAI47_06825	0.68	-0.3
1,425,603	+		IAI47_06825	0.68	+2.7
1,425,603	+		IAI47_06825	0.68	-2.1
1,425,604	-		IAI47_06825	0.68	+1.9
1,425,604	-		IAI47_06825	0.68	+2.3
1,425,604	-		IAI47_06825	0.68	+0.1